Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0390200-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:18491788:18493260:-1 gene:Os08g0390200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Oxidoreductase, 2OG-Fe oxygenase family protein, expressed. (Os08t0390200-01)
Sequence	ACCAGCACGGCGGCAGCACTCAAACGTTCATTCACCGCACAACACCACACTCGCGGACTC GCCCATATGGCCACCTTCTCCGGCACCGACCGCCTCCGCGACCTCCACGCCTTCGACGAC ACCAAGGCCGGCGTCAAGGGCCTCGTCGACGCCGGCGTCACCACCGTCCCCTACTTCTTC CGCCACCACCCCGACCCACTCCCCGTCGCCGCGCCGTCGGAGGCCGCCGCGGCCATCCCT CTCATCGACCTCGCCAAGGCCGACGTCGACCGTGGCCACGTCGTCTCCCAGGTGAGGTCC GCCGCCGAGTCGGCCGGGCTTTTCCAGGTGGTGAACCACGGCGTCGCCGGGGAGCTCATG GACGCGATGCTCGCGGCGGCGCGGCGGTTCAACGAGCAGCCCGCGGAGGCGAAGGCGCCC TACTACACCAGGGACCTCGGCAGCAAGGTCCGGTTCTTCTGCAACTTCGACCTGTTCCAG TCGCCGGCGGCGCAGTGGCGCGACACGCTGTACGTGGAGATGGTGCCCGACGCGCCCTCG CCGGAGGAGATCCCGCCGCCGCTCAGGGGCGTCGCGGAGGAGTTCGCCGCGGCGGTGTGG CGGCTCGGCGAGCGGGTGACCGAGCTGCTCTCGGAGGCGCTGGGCCTTCCCCCCGGGTAC CTCGCCGAGCACGCCGGGTGCATGGACGGCATGAGCATGGTGGCGCAGTACTACCCGCCG TGCCCGGAGCCGGAGAAGACGATGGGCACGACGCGGCACTCCGACCCGAGCTTCCTCACC GTGCTGCTGCAGGACGAGTCCGGCGGGCTCCAGGCGGTGCTCCCGCGGCCCCCGGAGGAG CGGTGGGTGGACGTGCCCCCGGTGGCCGGCGCGCTGGTGGTGAACGTCGGCGACCTCCTC CAGCTGGTGTCGAACGGCCGGCTCCGGAGCATGGAGCACCGGGTGCTGCCCACCGCCGCC AGCGCGGCGCGGGCCCGCGTGGCGGTGGCGTGCTTCTTCCGGCTCGAGTACTCGGCGTCG TTGACGAGGCCGAGGTCGTACGGCCCGATCGTGGATTCCGGCGAAGGCGGCGCGCGGCGG GCGGCGGCGGTGTACAGGAGCACGACGCCGAGGGATTTCCTGGCGTACTTCAACGGCAAG GGGCTCGACGGGCGGTCGGCGCTGGAGCATTTCAGGATTCCGGAGGCGGCTGCGGCTTCT TCCGCCGTCGACGTCGTCTCCTCCTCCACCACCGCCGCCGCATCCATTCCACGGTAG

Peptide Sequence

PEP ID	Os08t0390200-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:18491788:18493260:-1 gene:Os08g0390200 transcript:Os08t0390200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Oxidoreductase, 2OG-Fe oxygenase family protein, expressed. (Os08t0390200-01)
Sequence	TSTAAALKRSFTAQHHTRGLAHMATFSGTDRLRDLHAFDDTKAGVKGLVDAGVTTVPYFF RHHPDPLPVAAPSEAAAAIPLIDLAKADVDRGHVVSQVRSAAESAGLFQVVNHGVAGELM DAMLAAARRFNEQPAEAKAPYYTRDLGSKVRFFCNFDLFQSPAAQWRDTLYVEMVPDAPS PEEIPPPLRGVAEEFAAAVWRLGERVTELLSEALGLPPGYLAEHAGCMDGMSMVAQYYPP CPEPEKTMGTTRHSDPSFLTVLLQDESGGLQAVLPRPPEERWVDVPPVAGALVVNVGDLL QLVSNGRLRSMEHRVLPTAASAARARVAVACFFRLEYSASLTRPRSYGPIVDSGEGGARR AAAVYRSTTPRDFLAYFNGKGLDGRSALEHFRIPEAAAASSAVDVVSSSTTAAASIPR

Transcript Sequence

Transcript ID	Os08t0390200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:18491788:18493260:-1 gene:Os08g0390200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Oxidoreductase, 2OG-Fe oxygenase family protein, expressed. (Os08t0390200-01)
Sequence	CCACCAGCACGGCGGCAGCACTCAAACGTTCATTCACCGCACAACACCACACTCGCGGAC TCGCCCATATGGCCACCTTCTCCGGCACCGACCGCCTCCGCGACCTCCACGCCTTCGACG ACACCAAGGCCGGCGTCAAGGGCCTCGTCGACGCCGGCGTCACCACCGTCCCCTACTTCT TCCGCCACCACCCCGACCCACTCCCCGTCGCCGCGCCGTCGGAGGCCGCCGCGGCCATCC CTCTCATCGACCTCGCCAAGGCCGACGTCGACCGTGGCCACGTCGTCTCCCAGGTGAGGT CCGCCGCCGAGTCGGCCGGGCTTTTCCAGGTGGTGAACCACGGCGTCGCCGGGGAGCTCA TGGACGCGATGCTCGCGGCGGCGCGGCGGTTCAACGAGCAGCCCGCGGAGGCGAAGGCGC CCTACTACACCAGGGACCTCGGCAGCAAGGTCCGGTTCTTCTGCAACTTCGACCTGTTCC AGTCGCCGGCGGCGCAGTGGCGCGACACGCTGTACGTGGAGATGGTGCCCGACGCGCCCT CGCCGGAGGAGATCCCGCCGCCGCTCAGGGGCGTCGCGGAGGAGTTCGCCGCGGCGGTGT GGCGGCTCGGCGAGCGGGTGACCGAGCTGCTCTCGGAGGCGCTGGGCCTTCCCCCCGGGT ACCTCGCCGAGCACGCCGGGTGCATGGACGGCATGAGCATGGTGGCGCAGTACTACCCGC CGTGCCCGGAGCCGGAGAAGACGATGGGCACGACGCGGCACTCCGACCCGAGCTTCCTCA CCGTGCTGCTGCAGGACGAGTCCGGCGGGCTCCAGGCGGTGCTCCCGCGGCCCCCGGAGG AGCGGTGGGTGGACGTGCCCCCGGTGGCCGGCGCGCTGGTGGTGAACGTCGGCGACCTCC TCCAGCTGGTGTCGAACGGCCGGCTCCGGAGCATGGAGCACCGGGTGCTGCCCACCGCCG CCAGCGCGGCGCGGGCCCGCGTGGCGGTGGCGTGCTTCTTCCGGCTCGAGTACTCGGCGT CGTTGACGAGGCCGAGGTCGTACGGCCCGATCGTGGATTCCGGCGAAGGCGGCGCGCGGC GGGCGGCGGCGGTGTACAGGAGCACGACGCCGAGGGATTTCCTGGCGTACTTCAACGGCA AGGGGCTCGACGGGCGGTCGGCGCTGGAGCATTTCAGGATTCCGGAGGCGGCTGCGGCTT CTTCCGCCGTCGACGTCGTCTCCTCCTCCACCACCGCCGCCGCATCCATTCCACGGTAGC AATCGTGTCGGTGCGTGTTGAGGTTGTTGCTTGCTGGTAGCTAGTGTGTGTTATCCGGAA GGGTCGTAGCAGTGTACGCGTGGCGATTTGTTGGTTGCCAGTCAGGTTAGGCCAGGTGTT ACGTCACTGATTAATTTGTATGATCGTACTATGGATGGCATGTAAAACTTGGTGATTTTT GTACTGTAATAAATGTCGATCTTGACGTGGTTT