Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0390100-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:18480942:18486765:-1 gene:Os08g0390100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os08t0390100-01)
Sequence	ATGGCGCGCTTCTTCCGCGACTCCACCTCCTCGTCCCGCTCTAGCAGTGACCTCGCCGCC GGCGCCGACGCCTCCGCCTCCGCCGCCACCACCGCCGCCTCGTCGCGCACGCCGCCGCTC CCTTCCCCGTTTCCCGACCTCGGGGTGCCCCTCTCCGCCGCGGAACTCCGCGCCACCGCC TACGAGGTCCTCGTCGCCGCCTCCCGCGCCACCGGCGCCAAGCCCCTCACCTACATCACG CAGTCCGCAGCCTCCGCCGCCTCCGCCGCCGCACCCGCCCCCTCATTGTCGTCCTCCATC CACCGCTCGCTGGCGTCGACGGCGGCGGCGAGCAGCAGCAAGGTGAAGAAGGCGCTCGGG CTGAGGAGGTCCTCGGCGTCGTCGTCCTCCAAGCGGCGCGGGGCGCGGCGGCCGGCGACG GTGGCGGAGCTGGTGCGGGTGCAGCTCGGGGTGACGGAGCAGGCCGACGCGAGGATCCGC CGCGCGCTGCTGCGCATCGCCGCCGGCCAGCTTGGTAAACATGCAGAATCTTTGGTTTTG CCCTTGGAGTTCCTGCAGCAGTTTAAAGCATCAGATTTCCTTGATCCGCATGAGTACGAG GCCTGGCAGCTGAGGTACCTGAAGCTTCTAGAGGCTGGTTTACTGTTCCACCCACTTGTT CCCTTAAAAAAATCAGACATTTCTGCACTACGACTGCGCCAAGTAATACATGGAGCTTAT GATAAACCAGTTGAAACTGAGAAGAACTCCAAACTCTTGGTGGAGCTGTGCAGTGCTGCC AGGGCGCTTGCTGGCAGATCCCTTATTGAAACTTTTGATGAATGCCACTGGGCCGATGGC TTTCCTTTGAATCTCCATATCTACCAAATGCTGATAGAAGCTTGCTTTGATAGTGAGGAT GGTGCTGTGGTTGATGAGATTGATGAAGTGGTGGAGATGTTGACGAAGACTTGGCCTATT CTCGGAATTAATCAAATGTTTCACAATCTCTGCTTTGCGTGGGCACTGTTTAACCATTTT GTCATGTCAGGCCAAGCAGATATCGAGTTGCTGTCTGGTGCAGGAATTCAATTGACTGAA GTTGTAAAAGATGCAAAAACTACAAAAGATCCAGATTACTGTGATGTTTTAATCTCCACT ATAAACTCAATAATGGGTTGGACAGAGAAAAGATTGCTTGCTTACCATGAAACATTCAGT GCTAGTAATATTGATTCAATGCAAGGTATTGTCTCAATAGGTGTCTCAACTGCAAAGATT CTTGCCGAAGATATATCTCATGAATACCACCGGAAAAGGAAGCAAGAGACTGACGTAGTA GTACACAGCAAGATAGAAACCTATATAAGGTCCTCACTCCGTACTGCTTTTGCTCAAAAA ATGGAAGAGGCTGATTCAAAGCGGTCATCAAGGCACCCTGTGCCAGTTTTGTCAATCCTT GCAAAGGCAATTGGTGACCTTGCTACCAAGGAAAAAACTGTTTACAGTCCAGTACTCAAG AAATGGCACCCACTTGCTACAAGTGTTGCAGTTGCAACCCTTCATTCTTGTTTTGGGAAT GAGATAAAGCAATTTATAGCTGGGCTAACAGATCTGACACCAGATGCAGCTCAAGTGCTT AAGGCAGCTGACAAGTTAGAGAAGGATCTGGTTAATATTGCTGTCGAAGATTCTGTGAAT ATTGATGATGATGGCAAATTACTTATCAGAGAAATGCTACCATATGAAGCTGAAAATGTA ATGGCAAACCTGGTGAAAGCATGGGTAAAAGAACGCGTGGACAGACTAAAAGGATGGATT GACAAAAATTTGCAGCATGAGACTTGGAATCCAAAGGCTAATGGAGAGAACTTTGCTCCT TCCTCGATGAAGATGATGCAGATAATTGATGACACATTACAGGCGTTTTTTCAGTTTCCC TTAACTATGCACTCCACTCTTCATTCTGATCTAGCAACCGGACTGGACAGAAATATTCAG TATTATGTCTCTAAATCAAAAGCTGGCTGTGGTACGTATTAA

Peptide Sequence

PEP ID	Os08t0390100-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:18480942:18486765:-1 gene:Os08g0390100 transcript:Os08t0390100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os08t0390100-01)
Sequence	MARFFRDSTSSSRSSSDLAAGADASASAATTAASSRTPPLPSPFPDLGVPLSAAELRATA YEVLVAASRATGAKPLTYITQSAASAASAAAPAPSLSSSIHRSLASTAAASSSKVKKALG LRRSSASSSSKRRGARRPATVAELVRVQLGVTEQADARIRRALLRIAAGQLGKHAESLVL PLEFLQQFKASDFLDPHEYEAWQLRYLKLLEAGLLFHPLVPLKKSDISALRLRQVIHGAY DKPVETEKNSKLLVELCSAARALAGRSLIETFDECHWADGFPLNLHIYQMLIEACFDSED GAVVDEIDEVVEMLTKTWPILGINQMFHNLCFAWALFNHFVMSGQADIELLSGAGIQLTE VVKDAKTTKDPDYCDVLISTINSIMGWTEKRLLAYHETFSASNIDSMQGIVSIGVSTAKI LAEDISHEYHRKRKQETDVVVHSKIETYIRSSLRTAFAQKMEEADSKRSSRHPVPVLSIL AKAIGDLATKEKTVYSPVLKKWHPLATSVAVATLHSCFGNEIKQFIAGLTDLTPDAAQVL KAADKLEKDLVNIAVEDSVNIDDDGKLLIREMLPYEAENVMANLVKAWVKERVDRLKGWI DKNLQHETWNPKANGENFAPSSMKMMQIIDDTLQAFFQFPLTMHSTLHSDLATGLDRNIQ YYVSKSKAGCGTY

Transcript Sequence

Transcript ID	Os08t0390100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:18480942:18486765:-1 gene:Os08g0390100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os08t0390100-01)
Sequence	AGCAACGCAAAAACTCCTCGCTCCCTCTTCCAAGATCCCAAAACCACAAACCGATCAAAA CCCACACAAAAAACCGATCAAACGGAGATCAAAAAACGAAACCAAAAAAGAGAAAAATTC CCACCGAAAAAGGAGAAAAAAAAAAACCGCCGCCATCATGGCGCGCTTCTTCCGCGACTC CACCTCCTCGTCCCGCTCTAGCAGTGACCTCGCCGCCGGCGCCGACGCCTCCGCCTCCGC CGCCACCACCGCCGCCTCGTCGCGCACGCCGCCGCTCCCTTCCCCGTTTCCCGACCTCGG GGTGCCCCTCTCCGCCGCGGAACTCCGCGCCACCGCCTACGAGGTCCTCGTCGCCGCCTC CCGCGCCACCGGCGCCAAGCCCCTCACCTACATCACGCAGTCCGCAGCCTCCGCCGCCTC CGCCGCCGCACCCGCCCCCTCATTGTCGTCCTCCATCCACCGCTCGCTGGCGTCGACGGC GGCGGCGAGCAGCAGCAAGGTGAAGAAGGCGCTCGGGCTGAGGAGGTCCTCGGCGTCGTC GTCCTCCAAGCGGCGCGGGGCGCGGCGGCCGGCGACGGTGGCGGAGCTGGTGCGGGTGCA GCTCGGGGTGACGGAGCAGGCCGACGCGAGGATCCGCCGCGCGCTGCTGCGCATCGCCGC CGGCCAGCTTGGTAAACATGCAGAATCTTTGGTTTTGCCCTTGGAGTTCCTGCAGCAGTT TAAAGCATCAGATTTCCTTGATCCGCATGAGTACGAGGCCTGGCAGCTGAGGTACCTGAA GCTTCTAGAGGCTGGTTTACTGTTCCACCCACTTGTTCCCTTAAAAAAATCAGACATTTC TGCACTACGACTGCGCCAAGTAATACATGGAGCTTATGATAAACCAGTTGAAACTGAGAA GAACTCCAAACTCTTGGTGGAGCTGTGCAGTGCTGCCAGGGCGCTTGCTGGCAGATCCCT TATTGAAACTTTTGATGAATGCCACTGGGCCGATGGCTTTCCTTTGAATCTCCATATCTA CCAAATGCTGATAGAAGCTTGCTTTGATAGTGAGGATGGTGCTGTGGTTGATGAGATTGA TGAAGTGGTGGAGATGTTGACGAAGACTTGGCCTATTCTCGGAATTAATCAAATGTTTCA CAATCTCTGCTTTGCGTGGGCACTGTTTAACCATTTTGTCATGTCAGGCCAAGCAGATAT CGAGTTGCTGTCTGGTGCAGGAATTCAATTGACTGAAGTTGTAAAAGATGCAAAAACTAC AAAAGATCCAGATTACTGTGATGTTTTAATCTCCACTATAAACTCAATAATGGGTTGGAC AGAGAAAAGATTGCTTGCTTACCATGAAACATTCAGTGCTAGTAATATTGATTCAATGCA AGGTATTGTCTCAATAGGTGTCTCAACTGCAAAGATTCTTGCCGAAGATATATCTCATGA ATACCACCGGAAAAGGAAGCAAGAGACTGACGTAGTAGTACACAGCAAGATAGAAACCTA TATAAGGTCCTCACTCCGTACTGCTTTTGCTCAAAAAATGGAAGAGGCTGATTCAAAGCG GTCATCAAGGCACCCTGTGCCAGTTTTGTCAATCCTTGCAAAGGCAATTGGTGACCTTGC TACCAAGGAAAAAACTGTTTACAGTCCAGTACTCAAGAAATGGCACCCACTTGCTACAAG TGTTGCAGTTGCAACCCTTCATTCTTGTTTTGGGAATGAGATAAAGCAATTTATAGCTGG GCTAACAGATCTGACACCAGATGCAGCTCAAGTGCTTAAGGCAGCTGACAAGTTAGAGAA GGATCTGGTTAATATTGCTGTCGAAGATTCTGTGAATATTGATGATGATGGCAAATTACT TATCAGAGAAATGCTACCATATGAAGCTGAAAATGTAATGGCAAACCTGGTGAAAGCATG GGTAAAAGAACGCGTGGACAGACTAAAAGGATGGATTGACAAAAATTTGCAGCATGAGAC TTGGAATCCAAAGGCTAATGGAGAGAACTTTGCTCCTTCCTCGATGAAGATGATGCAGAT AATTGATGACACATTACAGGCGTTTTTTCAGTTTCCCTTAACTATGCACTCCACTCTTCA TTCTGATCTAGCAACCGGACTGGACAGAAATATTCAGTATTATGTCTCTAAATCAAAAGC TGGCTGTGGTACGTATTAAGGAGAACACATTTTTTCACGTACAATATACCAATGGTGAAT TCTCGTTGTGTTGATTCACAGGAACCCAGAGTACTCTTATTCCCCAACTACCTCATTTAA CAAGATGTGATGTTGGATCCAAATTATTCATGAAAAAGGAGAAGCCACAGGTACTTATGA AGCGTGGATCACAAGTTGGATCAACCACAAATGGTGCGTCAGTTATCCCTGAACTCTGCG TTCGAATTAATACACTCTATCATGTCCAAACTGAGTTGGAGAGCTTGGAGAAGAAGATTA AAACATACTTCCGAAATGTTGAATCAATTGACCGTAGCACAGATGAGCTGAATATCCACT TTAAGCTCTCTCAGTCAGCCTGCCAAGAAGGCATCCGACAGCTCTGTGAGACATTTGCAT ACAAGGTGATATACAATGATTTGAGCCATGTCCTTTTGGATTCACTGTATGCTGGTGATA CTGCATCAAACAGGGTGGAGCCTTTGTTGAGAGAGCTTGATCCTATCCTTAGGATGGTAT CTGGCATACTGCATAATGGTGTGCGGAACCGTGTTATAACATCATTGATGAAAGGTTCCT TCGATGGATTCCTGTTGGTGCTTCTGGCTGGTGGACCTACCCGTGCTTTCACCCTTCAGG ACTCTCAGATGATTGAGAATGATTTCAGAGCCCTCCGGAGCTTGTATATAGCCAATGGCC GTGGCCTGCCAGAGGAATTAGTCGACAAGGCGTCCTCAGAGGTGAAGAACATTCTGCCAC TCCTACGAACAGACACAGGAACGCTTATTGAGCGGTTCAAGCAAGCAATCTCTGAATCTT GTGGATCTACAGCCAAATCTGGGTTCCCAATGCCTCCAGTACCCGCCCACTGGAGCCCAA GCAACCCGAACACAATTTTGCGAGTTTTGTGCTACCGAAATGATGAGGCGGCTACAAAGT TCCTCAAGAAAGCATACAATCTACCAAAGAAACTTTGATTTGTCAGCAGTTTGGAAGCTT TGATCCTTTCATGTATATATTTGGTGCTTGCAAAAGATATGTTGGATTGAGTAGGGTTAT GATGCTTATACATTTGAAGGATACCAACAGCAACATGCTCCGGGAGAGTTGTGCCTTCAA CATGTGGCAGGCTCCATGGATGCAGACAGAGGATCTCATTTTTGAAGTGTCAAGTCCACG CTGGTCTAAAGATGCAAAGGTTACGACTTGTGAGTTTTACTGCTGGATCCGATGATTCCT GTTTCGTCTGGAGAGTTGTTTGTGCACGCGTGGGCTTGTTTTTCTGTCGCTCTATTCTTT TTAGAATTGAAGGGTTTTTTTTTAAAAGTACACACTCAAATCTGTGAATAAGCTATAGAC ACGCTTAAATTCTACACATACACGAGTGCTTACACTTGTTTTGTACAAATTGACTATAGA AAAAAAAAAGGGCACACGAGGGCCTATAACAATTTACTGATAATACTAATATATACTGCA TGTGATATTTGAGA