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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0385000-01
CDS Infomation

cds chromosome:IRGSP-1.0:8:18161142:18161597:-1 gene:Os08g0385000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to seed maturation protein PM41. (Os08t0385000-01)
Sequence

ATGTCCGGCGCGCAAGGTGCACAGCCCAAGGGCGCCTTCACGGCGACCACGTACAGGTCG
GCGGCGGCCGCGGCCACCGGCGGCGAGGAGGAGAGCCGGCACCCGCCGCCGCCGGCGAGG
ACGGAGCTCCGGTCGACCGAGGACGAGCGCGGGCTGCCCGTGAAGAGGCTGGAGGACAAG
GTCGACGACGCCGCCGGGAAGGGCGGCCCGGTGTTCGGCGCCGGCGAGGACGACGGCAAG
CCAGACCTCGGCGTCACCGGCACCGGCGGCGGCTGA

Peptide Sequence

PEP ID

Os08t0385000-01
PEP Infomation

pep chromosome:IRGSP-1.0:8:18161142:18161597:-1 gene:Os08g0385000 transcript:Os08t0385000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to seed maturation protein PM41. (Os08t0385000-01)
Sequence

MSGAQGAQPKGAFTATTYRSAAAAATGGEEESRHPPPPARTELRSTEDERGLPVKRLEDK
VDDAAGKGGPVFGAGEDDGKPDLGVTGTGGG

Transcript Sequence

Transcript ID

Os08t0385000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:18161142:18161597:-1 gene:Os08g0385000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to seed maturation protein PM41. (Os08t0385000-01)
Sequence

ACCGCACGCGATTCGCTTTGGCAGTGCAAAGCAGCCGAGATCACCCACCAGCAATAATGT
CCGGCGCGCAAGGTGCACAGCCCAAGGGCGCCTTCACGGCGACCACGTACAGGTCGGCGG
CGGCCGCGGCCACCGGCGGCGAGGAGGAGAGCCGGCACCCGCCGCCGCCGGCGAGGACGG
AGCTCCGGTCGACCGAGGACGAGCGCGGGCTGCCCGTGAAGAGGCTGGAGGACAAGGTCG
ACGACGCCGCCGGGAAGGGCGGCCCGGTGTTCGGCGCCGGCGAGGACGACGGCAAGCCAG
ACCTCGGCGTCACCGGCACCGGCGGCGGCTGATATTACTGCTGCTTCTTCAGTCACCATG
TGCTCCCTTGTAAAACTGTAGTAGCCTCTGTGGGTCTGTCTGTGTAGCACACGAAGTGCA
AAGACTTCTTTTCTATAAACTAAAAAAGCGAAGTGC