Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0384000-01
CDS Infomation

cds chromosome:IRGSP-1.0:8:18098755:18102910:1 gene:Os08g0384000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cytochrome b561 family protein. (Os08t0384000-01)
Sequence

ATGGCGGCGGCGCCGGCGGCGAGGTTCCCGGTGTTCGGGATCGTGCGGCTGCTGGGCCTG
GCGGCCGCGGCGGCCATCGTCGTCTGGGCCGTCCACTTCCGCGGCGGGATGGCGCTCTCC
TCCGAGACGGACAAGCTCCTCATCTTCAACGTTCACCCAGTATTGATGCTGATTGGATTG
GTAGTCCTGAATGGGGAAGCAATTTTGGCCTACAAGACAGTGCCAGGAACCAAGAAACTG
AAGAAGCTAGTACACCTTGCCTTGCAGTTCCTCGCCATGCTCCTGAGTCTGATTGGGCTC
TGGACTGTATGGAAGTTCCACGATGAGAGACAGATCGACCACTTATATACGCTTCACTCC
TGGTTGGGCCTTTCTTGCATCATCTTCTTCAGCTTGCAGTGGGCTACTGGATTTTATACA
TTTTGGTACCCTGGTGGATCTAGGAGTGGAAGAGCCTCCCTGCTCCCCTGGCATGTCTTC
TTCGGCCTCTTCCTTTACGTTCTCGCCATCGCCACAAGCGTTTCGGGACTTCTGGAGAAG
TCGATCTTCATGCAGAGCGCAAAAATGATCGGGCGTTTCTCGACAGAAGCTATGTTTATG
AACTCGTTGGGGATGTTGCTGGTGCTATTGGGGGCTCTTGTCATACTTGCAGTTGTTACT
CCTGGAGTTGGCAAGATCGATACATACCGAGGCTCATCAGAGTGA

Peptide Sequence

PEP ID

Os08t0384000-01
PEP Infomation

pep chromosome:IRGSP-1.0:8:18098755:18102910:1 gene:Os08g0384000 transcript:Os08t0384000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cytochrome b561 family protein. (Os08t0384000-01)
Sequence

MAAAPAARFPVFGIVRLLGLAAAAAIVVWAVHFRGGMALSSETDKLLIFNVHPVLMLIGL
VVLNGEAILAYKTVPGTKKLKKLVHLALQFLAMLLSLIGLWTVWKFHDERQIDHLYTLHS
WLGLSCIIFFSLQWATGFYTFWYPGGSRSGRASLLPWHVFFGLFLYVLAIATSVSGLLEK
SIFMQSAKMIGRFSTEAMFMNSLGMLLVLLGALVILAVVTPGVGKIDTYRGSSE

Transcript Sequence

Transcript ID

Os08t0384000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:18098755:18102910:1 gene:Os08g0384000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cytochrome b561 family protein. (Os08t0384000-01)
Sequence

GTTGGCGTCTTTGCTTCTCCTCGTCTCCCTCCTCCTCCTTCCCCTCCGGCGCTCGATCTC
GCTGAGTCGCCGCACACCATTTTGGCGATGGCGGCGGCGCCGGCGGCGAGGTTCCCGGTG
TTCGGGATCGTGCGGCTGCTGGGCCTGGCGGCCGCGGCGGCCATCGTCGTCTGGGCCGTC
CACTTCCGCGGCGGGATGGCGCTCTCCTCCGAGACGGACAAGCTCCTCATCTTCAACGTT
CACCCAGTATTGATGCTGATTGGATTGGTAGTCCTGAATGGGGAAGCAATTTTGGCCTAC
AAGACAGTGCCAGGAACCAAGAAACTGAAGAAGCTAGTACACCTTGCCTTGCAGTTCCTC
GCCATGCTCCTGAGTCTGATTGGGCTCTGGACTGTATGGAAGTTCCACGATGAGAGACAG
ATCGACCACTTATATACGCTTCACTCCTGGTTGGGCCTTTCTTGCATCATCTTCTTCAGC
TTGCAGTGGGCTACTGGATTTTATACATTTTGGTACCCTGGTGGATCTAGGAGTGGAAGA
GCCTCCCTGCTCCCCTGGCATGTCTTCTTCGGCCTCTTCCTTTACGTTCTCGCCATCGCC
ACAAGCGTTTCGGGACTTCTGGAGAAGTCGATCTTCATGCAGAGCGCAAAAATGATCGGG
CGTTTCTCGACAGAAGCTATGTTTATGAACTCGTTGGGGATGTTGCTGGTGCTATTGGGG
GCTCTTGTCATACTTGCAGTTGTTACTCCTGGAGTTGGCAAGATCGATACATACCGAGGC
TCATCAGAGTGAGAGGGAGGCGGCGCGCTGTAGTTCTTGAGATGCAGTTAGTTCTGAACG
ACATTTCTGGCTCCAACTGAGGAATTTATCTGTACATCCCATTTTCACTGGAATTATTGT
TACCTGTTTAGATCTGATGAAGAGAGTTATTTGTCGGTACACTTTTTAAGTTGTAGTGGT
AGATTGATGATCAAATTGACATAAATTACGGCGAAATCCATTCTGGAGGACGTGGGCCCC
GAGATGTTTGGGTGTTCTTAATGTATGAAGGAATACGGAAAAAGGAAAGCAGTTTTGTAT
GCTTAACAATAACAATTAATCATCCCATAAAATCGCTATTCTTGTT