Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0383800-00
CDS Infomation

cds chromosome:IRGSP-1.0:8:18093397:18095760:-1 gene:Os08g0383800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Taurine catabolism dioxygenase TauD/TfdA domain containing protein. (Os08t0383800-00)
Sequence

ATGGGCGGCGACGGCGAGTTCTTCAGCGTGGGGGAGTGCGACGGCCAGAAGACCATCGAC
GGCGAGCAGGTGCCGCTGGTGCTGACGCCGGCGTCGTCCGGCTCCGGCGAGCGAGGCGGC
GAGGCGCTGGCGGCGGCGCTGCGCGCGAGGCGCGAGTGGGTGGAGGCGAAGGTGGTGTCG
AACAGCGCCGTGCTGCTGCGCGGGTTCGGCGTGCGCGACGCTGCCGAGTTCGACGCCGTG
GTGGGCGCCCTGGGGTGGCCGGACATCCGGTACGTCGGCCCGGCGCCTCGCACCCACGTC
CACGGCCGCGTCTGGACCGCCAACGAGGGCCCCCTCGACGAGTTCATCTACTACCACCAC
GAGATGGTCCTGATAAAGGAGTTCCCGGGGAAGGTGATACTGTTCTGCGAGGTGGCGCCG
CCGGAGGGAGGGGAGACGCCGTTCGTGCCGAGCTTCAGGGTCACGGAGAGGGTGATGGAG
GAGTTCCCGGAGATGGTGGAGGAGCTCGACGAGAAGGGCCTCCGGTACACGTTCACGGCG
CTGAGCAAGAACGACACCAAGTCCATGCGCGGCCGAGGGTGGGAGGACGCCTTCGCCACC
ACCGACAAGGCCGAGGCCGAGAAGAGGGCTCGGGCGCTAGGGATGGAGGTGGAGTGGCTG
GCGAACGGCGGGGCGAGGACGATCCTAGGGCCGAGGAAGCTGACGCGAGTCTTCCCGGGG
CGGCAGGGTCGGCGGATGTGGTTCAACACGGTGGTGGGGATGCACGGGAAGGCACTGAGC
TCGGCGACGATGGCGGACGGCGCCGAGATCCCAACGGCGTTCGTGGCGCGGTGCGGCGAG
ATCATCGAGGAGGAGAGCATCCAGTTCCGGTGGGAGGTGGGCGACGTGCTCATCCTCGAC
AACCTCGCCACCCTCCACGGCCGCCGCCCCTCGCTGCCGCCCCGCCGAGTCCTCGTCGCC
ACCTGCAAGTGA

Peptide Sequence

PEP ID

Os08t0383800-00
PEP Infomation

pep chromosome:IRGSP-1.0:8:18093397:18095760:-1 gene:Os08g0383800 transcript:Os08t0383800-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Taurine catabolism dioxygenase TauD/TfdA domain containing protein. (Os08t0383800-00)
Sequence

MGGDGEFFSVGECDGQKTIDGEQVPLVLTPASSGSGERGGEALAAALRARREWVEAKVVS
NSAVLLRGFGVRDAAEFDAVVGALGWPDIRYVGPAPRTHVHGRVWTANEGPLDEFIYYHH
EMVLIKEFPGKVILFCEVAPPEGGETPFVPSFRVTERVMEEFPEMVEELDEKGLRYTFTA
LSKNDTKSMRGRGWEDAFATTDKAEAEKRARALGMEVEWLANGGARTILGPRKLTRVFPG
RQGRRMWFNTVVGMHGKALSSATMADGAEIPTAFVARCGEIIEEESIQFRWEVGDVLILD
NLATLHGRRPSLPPRRVLVATCK

Transcript Sequence

Transcript ID

Os08t0383800-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:18093397:18095760:-1 gene:Os08g0383800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Taurine catabolism dioxygenase TauD/TfdA domain containing protein. (Os08t0383800-00)
Sequence

ATGGGCGGCGACGGCGAGTTCTTCAGCGTGGGGGAGTGCGACGGCCAGAAGACCATCGAC
GGCGAGCAGGTGCCGCTGGTGCTGACGCCGGCGTCGTCCGGCTCCGGCGAGCGAGGCGGC
GAGGCGCTGGCGGCGGCGCTGCGCGCGAGGCGCGAGTGGGTGGAGGCGAAGGTGGTGTCG
AACAGCGCCGTGCTGCTGCGCGGGTTCGGCGTGCGCGACGCTGCCGAGTTCGACGCCGTG
GTGGGCGCCCTGGGGTGGCCGGACATCCGGTACGTCGGCCCGGCGCCTCGCACCCACGTC
CACGGCCGCGTCTGGACCGCCAACGAGGGCCCCCTCGACGAGTTCATCTACTACCACCAC
GAGATGGTCCTGATAAAGGAGTTCCCGGGGAAGGTGATACTGTTCTGCGAGGTGGCGCCG
CCGGAGGGAGGGGAGACGCCGTTCGTGCCGAGCTTCAGGGTCACGGAGAGGGTGATGGAG
GAGTTCCCGGAGATGGTGGAGGAGCTCGACGAGAAGGGCCTCCGGTACACGTTCACGGCG
CTGAGCAAGAACGACACCAAGTCCATGCGCGGCCGAGGGTGGGAGGACGCCTTCGCCACC
ACCGACAAGGCCGAGGCCGAGAAGAGGGCTCGGGCGCTAGGGATGGAGGTGGAGTGGCTG
GCGAACGGCGGGGCGAGGACGATCCTAGGGCCGAGGAAGCTGACGCGAGTCTTCCCGGGG
CGGCAGGGTCGGCGGATGTGGTTCAACACGGTGGTGGGGATGCACGGGAAGGCACTGAGC
TCGGCGACGATGGCGGACGGCGCCGAGATCCCAACGGCGTTCGTGGCGCGGTGCGGCGAG
ATCATCGAGGAGGAGAGCATCCAGTTCCGGTGGGAGGTGGGCGACGTGCTCATCCTCGAC
AACCTCGCCACCCTCCACGGCCGCCGCCCCTCGCTGCCGCCCCGCCGAGTCCTCGTCGCC
ACCTGCAAGTGAAATGT