Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0376550-00
CDS Infomation

cds chromosome:IRGSP-1.0:8:17665976:17666521:1 gene:Os08g0376550 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Patatin-like protein 1. (Os08t0376550-00)
Sequence

ATGACCCACGTGAGCAAGCAGATCCTGCTGGGGAACCAGGACTTCTTCCCGATCAAACCG
GCCGACTACGGCAAGTTCATGGTGCTCTCCCTCAGCACCGGCTCGGCCAAGGTGGAGGGG
AGGTCATTCGACGCCGACGAGTCTGGCCGGTGGGGCCTCCTCGGCTGGCTCCGCAACGAC
GGCGGCTCGGCGCCGCCGCTGATCGACAGCTTCGCGCAGTCCAGCTCCGACCTCGTCGAC
ATCCACGCCTCCGTGCTCTTCCAGGCGCTCCGCTGCGACCGCCACTACCTCCGCATCCAG
GACGACGACCTCACCGGCGACGCCGCTTCCGTCGACGTGGCCACGCCGGAGAACCTCCGC
GCGCTCGCCGGCGCCGGGGCCGCGCTGCTGCGGAGGCAGGCGTGCAGGGTGGACGTGGAG
ACCGGCAGGAACGTGGCCGACGCCGGCAGGGGCACCAACGAGGAGGAGCTGGCGCGCTTC
GCCCGGATGCTGTCGATGGAGCGCCGGGCGAGGCTCGGCAAGCAGGAGTCCACCCCTCGT
GTATAA

Peptide Sequence

PEP ID

Os08t0376550-00
PEP Infomation

pep chromosome:IRGSP-1.0:8:17665976:17666521:1 gene:Os08g0376550 transcript:Os08t0376550-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Patatin-like protein 1. (Os08t0376550-00)
Sequence

MTHVSKQILLGNQDFFPIKPADYGKFMVLSLSTGSAKVEGRSFDADESGRWGLLGWLRND
GGSAPPLIDSFAQSSSDLVDIHASVLFQALRCDRHYLRIQDDDLTGDAASVDVATPENLR
ALAGAGAALLRRQACRVDVETGRNVADAGRGTNEEELARFARMLSMERRARLGKQESTPR
V

Transcript Sequence

Transcript ID

Os08t0376550-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:17665976:17666521:1 gene:Os08g0376550 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Patatin-like protein 1. (Os08t0376550-00)
Sequence

ATGACCCACGTGAGCAAGCAGATCCTGCTGGGGAACCAGGACTTCTTCCCGATCAAACCG
GCCGACTACGGCAAGTTCATGGTGCTCTCCCTCAGCACCGGCTCGGCCAAGGTGGAGGGG
AGGTCATTCGACGCCGACGAGTCTGGCCGGTGGGGCCTCCTCGGCTGGCTCCGCAACGAC
GGCGGCTCGGCGCCGCCGCTGATCGACAGCTTCGCGCAGTCCAGCTCCGACCTCGTCGAC
ATCCACGCCTCCGTGCTCTTCCAGGCGCTCCGCTGCGACCGCCACTACCTCCGCATCCAG
GACGACGACCTCACCGGCGACGCCGCTTCCGTCGACGTGGCCACGCCGGAGAACCTCCGC
GCGCTCGCCGGCGCCGGGGCCGCGCTGCTGCGGAGGCAGGCGTGCAGGGTGGACGTGGAG
ACCGGCAGGAACGTGGCCGACGCCGGCAGGGGCACCAACGAGGAGGAGCTGGCGCGCTTC
GCCCGGATGCTGTCGATGGAGCGCCGGGCGAGGCTCGGCAAGCAGGAGTCCACCCCTCGT
GTATAA