Plant GARDEN How To ▶︎

JA

EN

Oryza sativa

CDS Sequence

CDS ID

Os08t0375800-01

CDS Infomation

cds chromosome:IRGSP-1.0:8:17628705:17631108:1 gene:Os08g0375800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os08t0375800-01)

Sequence

ATGCGCCACCACCACCTCGCCGTCGCCGCCGCGAGGTCCCACGCCTCCCTCCTCAAGTCC
GGCGTCGCCGCCCCCACGCCCTGGAACCAGCTCCTCACCGCCTACTCCCGCTCCTCCCCC
GATGGCCTCGCCGCCGCGCGCCGGGTGTTCGACGAGGTGCCCCGCCGCGACGAGGTCTCC
TGGAACGCGCTCCTCGCCGCGCAAGCCGCGTCCGGCGCGCACCCGGAAGCATGGCGCCTC
CTCCGGGCCATGCACGCGCAGGGGCTCGCTTCCAACACGTTCGCCCTCGGCTCGGCCCTC
CGCTCCGCCGCCGTAGCGCGGCGTCCTGCCATCGGCGCCCAACTGCAGTCGCTCGCTTTG
AAATCCGGCCTTGCCAACAATGTGTTCGCGGCAAGTGCATTACTTGATGTGTATGCTAAA
TGTGGCCGCGTGAGGGATGCCCGACAGGTGTTTGATGGAATGCCAGAGCGGAACACTGTT
TCTTGGAATGCACTCATTGCCGGGTATACTGAATCTGGGGACATGGCATCTGCACTGGAG
CTGTTTCTTGAGATGGAAAGAGAAGGTTTGGCTCCAGATGAAGCAACATTTGCGTCGCTG
CTCACAGCAGTTGAGGGCCCAAGCTGTTTCTTGATGCACCAGTTGCATGGGAAGATTGTG
AAGTATGGATCTGCGTTAGGGCTGACAGTGTTGAATGCAGCAATCACTGCATATTCACAA
TGTGGGTCCCTGAAAGACTCTAGAAGGATCTTTGATGGAATTGGGGACATTAGGGATTTG
ATCTCATGGAATGCGATGCTTGGAGCTTACACTCACAATGGAATGGACGACGAGGCGATG
AAATTCTTTGTTAGGATGATGCAAGAGAGTGGAGTTCATCCTGACATGTATAGTTTCACA
AGTATCATAAGTTCATGTTCAGAGCATGGGCATGATGATCATCAAGGGAGAGTAATTCAT
GGGTTGGTGATCAAGAGTGCTCTGGAAGGAGTCACGCCTGTTTGTAATGCTCTGATTGCC
ATGTACACTAGGTACAATGAGAATTGCATGATGGAAGATGCATACAAGTGTTTTAACTCT
TTGGTGCTTAAGGACACAGTGTCCTGGAATTCTATGCTGACTGGATATTCACAGCACGGT
TTGAGTGCCGATGCCTTGAAGTTCTTCAGATGTATGTGTTCGGAAAATGTTAGAACCGAT
GAGTATGCATTTTCTGCGGCTCTGCGGTCCTCTTCTGAACTTGCTGTGCTTCAGTTAGGT
AAACAAATACATGGTTTAGTCATCCATTCTGGTTTTGCTTCCAATGATTTTGTTTCCAGC
TCGCTAATCTTCATGTACTCTAAGAGTGGCATTATTGACGATGCACGGAAATCTTTTGAG
GAGGCAGATAAGAGTAGTTCAGTGCCTTGGAATGCTATGATATTTGGTTATGCACAACAT
GGACAAGCTGAAAACGTAGACATACTTTTCAATGAGATGCTGCAACGTAAGGCTCCTTTG
GATCACATAACGTTTGTTGGCCTAATTACTTCCTGCAGTCATGCTGGTCTTGTAGATGAA
GGGTCAGAGATTCTCAATACAATGGAAACTAAGTATGGAGTTCCTCTTCGAATGGAGCAC
TATGCATGTGGTGTTGATCTGTATGGGAGGGCTGGACAGCTTGATAAAGCAAAAAAGCTA
ATTGATTCTATGCCATTTGAACCAGATGCCATGGTATGGATGACCCTATTGGGTGCTTGC
AGAATCCATGGGAATGTGGAACTAGCAAGCGATGTGGCCAGCCATCTATTTGTGGCAGAA
CCTAGACAGCACTCTACCTATGTTCTCCTGTCCAGCATGTATTCTGGTCTTGGGATGTGG
AGTGATAGGGCAACAGTGCAGAGGGTAATGAAGAAACGAGGATTAAGCAAAGTCCCTGGG
TGGAGCTGGATTGAGGTGAAGAATGAGGTGCATTCTTTCAATGCAGAGGATAAATCACAC
CCAAAGATGGATGAGATCTATGAGATGTTAAGGGTGTTGCTTCAAGTAGAGCAGATGCTT
TCTAATTGTGAAGATGAAGATATTCTCATGATAACTTCCAGTGGCATATGA

Peptide Sequence

PEP ID

Os08t0375800-01

PEP Infomation

pep chromosome:IRGSP-1.0:8:17628705:17631108:1 gene:Os08g0375800 transcript:Os08t0375800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os08t0375800-01)

Sequence

MRHHHLAVAAARSHASLLKSGVAAPTPWNQLLTAYSRSSPDGLAAARRVFDEVPRRDEVS
WNALLAAQAASGAHPEAWRLLRAMHAQGLASNTFALGSALRSAAVARRPAIGAQLQSLAL
KSGLANNVFAASALLDVYAKCGRVRDARQVFDGMPERNTVSWNALIAGYTESGDMASALE
LFLEMEREGLAPDEATFASLLTAVEGPSCFLMHQLHGKIVKYGSALGLTVLNAAITAYSQ
CGSLKDSRRIFDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFT
SIISSCSEHGHDDHQGRVIHGLVIKSALEGVTPVCNALIAMYTRYNENCMMEDAYKCFNS
LVLKDTVSWNSMLTGYSQHGLSADALKFFRCMCSENVRTDEYAFSAALRSSSELAVLQLG
KQIHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFEEADKSSSVPWNAMIFGYAQH
GQAENVDILFNEMLQRKAPLDHITFVGLITSCSHAGLVDEGSEILNTMETKYGVPLRMEH
YACGVDLYGRAGQLDKAKKLIDSMPFEPDAMVWMTLLGACRIHGNVELASDVASHLFVAE
PRQHSTYVLLSSMYSGLGMWSDRATVQRVMKKRGLSKVPGWSWIEVKNEVHSFNAEDKSH
PKMDEIYEMLRVLLQVEQMLSNCEDEDILMITSSGI

Transcript Sequence

Transcript ID

Os08t0375800-01

Transcript Infomation

cdna chromosome:IRGSP-1.0:8:17628705:17631108:1 gene:Os08g0375800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os08t0375800-01)

Sequence

CTCCTTCCTCCTCCGTTGCTCTTCGACGATTCAACCCAGCCGCCATGGAGAGCGGAGGGA
GGTAGCTGACTAGCTGGGGCTGGGGATTTCCGGCGAACGGAGGTGAGGTTGGTGCCGCTC
CGGCCGCTACTTCCGCGACCCAAAGAATCGGCAAGTCCATAGATACCGGACCTCCGCGAA
TGCCCCGCGGCCATAGACGCCGCCGCCGCTGCGCATGCGCCACCACCACCTCGCCGTCGC
CGCCGCGAGGTCCCACGCCTCCCTCCTCAAGTCCGGCGTCGCCGCCCCCACGCCCTGGAA
CCAGCTCCTCACCGCCTACTCCCGCTCCTCCCCCGATGGCCTCGCCGCCGCGCGCCGGGT
GTTCGACGAGGTGCCCCGCCGCGACGAGGTCTCCTGGAACGCGCTCCTCGCCGCGCAAGC
CGCGTCCGGCGCGCACCCGGAAGCATGGCGCCTCCTCCGGGCCATGCACGCGCAGGGGCT
CGCTTCCAACACGTTCGCCCTCGGCTCGGCCCTCCGCTCCGCCGCCGTAGCGCGGCGTCC
TGCCATCGGCGCCCAACTGCAGTCGCTCGCTTTGAAATCCGGCCTTGCCAACAATGTGTT
CGCGGCAAGTGCATTACTTGATGTGTATGCTAAATGTGGCCGCGTGAGGGATGCCCGACA
GGTGTTTGATGGAATGCCAGAGCGGAACACTGTTTCTTGGAATGCACTCATTGCCGGGTA
TACTGAATCTGGGGACATGGCATCTGCACTGGAGCTGTTTCTTGAGATGGAAAGAGAAGG
TTTGGCTCCAGATGAAGCAACATTTGCGTCGCTGCTCACAGCAGTTGAGGGCCCAAGCTG
TTTCTTGATGCACCAGTTGCATGGGAAGATTGTGAAGTATGGATCTGCGTTAGGGCTGAC
AGTGTTGAATGCAGCAATCACTGCATATTCACAATGTGGGTCCCTGAAAGACTCTAGAAG
GATCTTTGATGGAATTGGGGACATTAGGGATTTGATCTCATGGAATGCGATGCTTGGAGC
TTACACTCACAATGGAATGGACGACGAGGCGATGAAATTCTTTGTTAGGATGATGCAAGA
GAGTGGAGTTCATCCTGACATGTATAGTTTCACAAGTATCATAAGTTCATGTTCAGAGCA
TGGGCATGATGATCATCAAGGGAGAGTAATTCATGGGTTGGTGATCAAGAGTGCTCTGGA
AGGAGTCACGCCTGTTTGTAATGCTCTGATTGCCATGTACACTAGGTACAATGAGAATTG
CATGATGGAAGATGCATACAAGTGTTTTAACTCTTTGGTGCTTAAGGACACAGTGTCCTG
GAATTCTATGCTGACTGGATATTCACAGCACGGTTTGAGTGCCGATGCCTTGAAGTTCTT
CAGATGTATGTGTTCGGAAAATGTTAGAACCGATGAGTATGCATTTTCTGCGGCTCTGCG
GTCCTCTTCTGAACTTGCTGTGCTTCAGTTAGGTAAACAAATACATGGTTTAGTCATCCA
TTCTGGTTTTGCTTCCAATGATTTTGTTTCCAGCTCGCTAATCTTCATGTACTCTAAGAG
TGGCATTATTGACGATGCACGGAAATCTTTTGAGGAGGCAGATAAGAGTAGTTCAGTGCC
TTGGAATGCTATGATATTTGGTTATGCACAACATGGACAAGCTGAAAACGTAGACATACT
TTTCAATGAGATGCTGCAACGTAAGGCTCCTTTGGATCACATAACGTTTGTTGGCCTAAT
TACTTCCTGCAGTCATGCTGGTCTTGTAGATGAAGGGTCAGAGATTCTCAATACAATGGA
AACTAAGTATGGAGTTCCTCTTCGAATGGAGCACTATGCATGTGGTGTTGATCTGTATGG
GAGGGCTGGACAGCTTGATAAAGCAAAAAAGCTAATTGATTCTATGCCATTTGAACCAGA
TGCCATGGTATGGATGACCCTATTGGGTGCTTGCAGAATCCATGGGAATGTGGAACTAGC
AAGCGATGTGGCCAGCCATCTATTTGTGGCAGAACCTAGACAGCACTCTACCTATGTTCT
CCTGTCCAGCATGTATTCTGGTCTTGGGATGTGGAGTGATAGGGCAACAGTGCAGAGGGT
AATGAAGAAACGAGGATTAAGCAAAGTCCCTGGGTGGAGCTGGATTGAGGTGAAGAATGA
GGTGCATTCTTTCAATGCAGAGGATAAATCACACCCAAAGATGGATGAGATCTATGAGAT
GTTAAGGGTGTTGCTTCAAGTAGAGCAGATGCTTTCTAATTGTGAAGATGAAGATATTCT
CATGATAACTTCCAGTGGCATATGAACTTGAATTTTGATAGTCCACTATTGTGTACGATA
TGTTCTCATCCAGATAGTGTTATTCCTTAAGTAAACATATATCACAAATATTATTTTTCT
GACC