Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0374100-02
CDS Infomation	cds chromosome:IRGSP-1.0:8:17513074:17516033:-1 gene:Os08g0374100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:UBIQUITIN-CONJUGATING ENZYME 5 description:Similar to Ubiquitin carrier protein. (Os08t0374100-01);Similar to Ubiquitin carrier protein. (Os08t0374100-02)
Sequence	ATCTCCATTCTCGTCGTCTCCTCAGCTGCTTGCGCCAAGACGAGTCGCGGCTCAACAGGG GGAGGGGCGGCGATCTCCATCCATCCGGCGAGCAGAGCAGGGGAGGGGAGGGGATCCTGG AAAATGCTAAACCTTATTAAGATAAAGGGTCAAAAGAAGGAAGATGCAGCCAATGCAAAT GGAAAGCCTCCTGCCAAAAAGCAAAGTCCAGGGGAGTTGCGTCTTCACAAAGATATTGCT GAACTTAACCTTCCTAAGTCGACTAGAATTTCTTTTCCTAATGGCAAGGATGATTTGATG AACTTTGAAGTTACTATTCGACCTGATGAGGGATACTATGTAGGTGGTAAATTTATTTTT ACTTTCCAAGTTCCTCCTGCCTATCCTCATGAACCACCCAAAGTCAAGTGCAAGACTAAG GTCTATCATCCCAATATTGACTTGGAGGGAAATGTCTGCCTTAACATTCTGCGTGAAGAT TGGAAGCCTGTCCTGAATGTCAACACGATTGTATATGGCTTGAATCTTCTTTTCTCACAA CCTAATGATGAGGACCCTCTAAATCATGAGGCGGCAGCAGTTCTTCGAGACAACCCAGAA AAGTTTGAGAGAAATGTCCAGAGGGCAATGGCTGGAGGCTATGTTGGTGAAACCCACTTC CCTAGATGTATGTAA

Peptide Sequence

PEP ID	Os08t0374100-02
PEP Infomation	pep chromosome:IRGSP-1.0:8:17513074:17516033:-1 gene:Os08g0374100 transcript:Os08t0374100-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:UBIQUITIN-CONJUGATING ENZYME 5 description:Similar to Ubiquitin carrier protein. (Os08t0374100-01);Similar to Ubiquitin carrier protein. (Os08t0374100-02)
Sequence	ISILVVSSAACAKTSRGSTGGGAAISIHPASRAGEGRGSWKMLNLIKIKGQKKEDAANAN GKPPAKKQSPGELRLHKDIAELNLPKSTRISFPNGKDDLMNFEVTIRPDEGYYVGGKFIF TFQVPPAYPHEPPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNVNTIVYGLNLLFSQ PNDEDPLNHEAAAVLRDNPEKFERNVQRAMAGGYVGETHFPRCM

Transcript Sequence

Transcript ID	Os08t0374100-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:17513074:17516033:-1 gene:Os08g0374100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:UBIQUITIN-CONJUGATING ENZYME 5 description:Similar to Ubiquitin carrier protein. (Os08t0374100-01);Similar to Ubiquitin carrier protein. (Os08t0374100-02)
Sequence	ATCTCCATTCTCGTCGTCTCCTCAGCTGCTTGCGCCAAGACGAGTCGCGGCTCAACAGGG GGAGGGGCGGCGATCTCCATCCATCCGGCGAGCAGAGCAGGGGAGGGGAGGGGATCCTGG AAAATGCTAAACCTTATTAAGATAAAGGGTCAAAAGAAGGAAGATGCAGCCAATGCAAAT GGAAAGCCTCCTGCCAAAAAGCAAAGTCCAGGGGAGTTGCGTCTTCACAAAGATATTGCT GAACTTAACCTTCCTAAGTCGACTAGAATTTCTTTTCCTAATGGCAAGGATGATTTGATG AACTTTGAAGTTACTATTCGACCTGATGAGGGATACTATGTAGGTGGTAAATTTATTTTT ACTTTCCAAGTTCCTCCTGCCTATCCTCATGAACCACCCAAAGTCAAGTGCAAGACTAAG GTCTATCATCCCAATATTGACTTGGAGGGAAATGTCTGCCTTAACATTCTGCGTGAAGAT TGGAAGCCTGTCCTGAATGTCAACACGATTGTATATGGCTTGAATCTTCTTTTCTCACAA CCTAATGATGAGGACCCTCTAAATCATGAGGCGGCAGCAGTTCTTCGAGACAACCCAGAA AAGTTTGAGAGAAATGTCCAGAGGGCAATGGCTGGAGGCTATGTTGGTGAAACCCACTTC CCTAGATGTATGTAAGGCCTGAAGATGGTGATCGGTACCTGACTTATCTGCTGCTGCCAT TTCTCCTACCAATGCACTATGGTAAAAGCAGTATATGTAACCAAGAAGGAACTTCTCTGT TATGTAACAACAGCAGTTGCTAGAAAGTAAGTTAGTGAGGCAATTGAACTCACGTTCATA ACCCGCAATCCGAAGACTCTGGGTTAACCTGTTGTGGCAAATGTTCTCTTTTGGCCCTCG CGCGCATCTCAGTCATTCTGATTCATACCAGTTTCTGAGATGCTTTTGTATAATGCCAGC TAGAGAAAATGCTGAACAGTATGTGTGTGCTGCACTTACTGCCTGTTATGACTTATGGCT ACCAGGAAGTAAGAACAAGTTCACTAACATTGCTTAATGTAACATGCTACCTTGGGTAGT TGTGTTGTTCTTTTTTCCAAGCTCTGTAACTGGAAAAGTCTTCTCCACCT