Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0374000-01
CDS Infomation

cds chromosome:IRGSP-1.0:8:17510752:17511689:-1 gene:Os08g0374000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Bet v I allergen family protein. (Os08t0374000-01)
Sequence

ATGAAGAGCCTGCAAGGTGAGGTCCACCTGAACATCCCTGCATCCAAGGCATGGGAGATG
TTCACCAACAATGAGACCCTGGGCAAGATCAGCCCCGAAATGCTGTCGGGCGCCGAGTAC
CTTGAAGGAGATGGCAGCCCTGGCAGCCTCAGGATCTTCAAGCTAGGACCTGCACTTCAT
CACTTTGTCAAGGAATCTGTTCAGAAGGTTGAGAAGGTCGAGACAGGCCGGTCCTTCGGC
TATGAAGTGGTCAGCGGTGAGCTGAAGGAGGTCTATGATCCCTACCATGTCACCTTCTCC
TTCGCCCCCGTCCCGGGGAAGGAAGGCGAGCAGTGCGTCGCTGGGTGGAAGGCTGAGTTT
GAGCCCATCACCCCCACTTCCCCGCCACCAGAGAAGGCCAAGGATGCCGCCCTCGGGTTT
CTTAAATTGTTTGAGACTTGCGAAGCCACTAACTAG

Peptide Sequence

PEP ID

Os08t0374000-01
PEP Infomation

pep chromosome:IRGSP-1.0:8:17510752:17511689:-1 gene:Os08g0374000 transcript:Os08t0374000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Bet v I allergen family protein. (Os08t0374000-01)
Sequence

MKSLQGEVHLNIPASKAWEMFTNNETLGKISPEMLSGAEYLEGDGSPGSLRIFKLGPALH
HFVKESVQKVEKVETGRSFGYEVVSGELKEVYDPYHVTFSFAPVPGKEGEQCVAGWKAEF
EPITPTSPPPEKAKDAALGFLKLFETCEATN

Transcript Sequence

Transcript ID

Os08t0374000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:17510752:17511689:-1 gene:Os08g0374000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Bet v I allergen family protein. (Os08t0374000-01)
Sequence

ACACACAGCAACACTTGCACTGCAACCAGAAGCCAGCCACTACTCAGTAGGAGATTGGAG
CTGAGAGCAGCAGCAGCAGCAGCAGCTAGGAAGATGAAGAGCCTGCAAGGTGAGGTCCAC
CTGAACATCCCTGCATCCAAGGCATGGGAGATGTTCACCAACAATGAGACCCTGGGCAAG
ATCAGCCCCGAAATGCTGTCGGGCGCCGAGTACCTTGAAGGAGATGGCAGCCCTGGCAGC
CTCAGGATCTTCAAGCTAGGACCTGCACTTCATCACTTTGTCAAGGAATCTGTTCAGAAG
GTTGAGAAGGTCGAGACAGGCCGGTCCTTCGGCTATGAAGTGGTCAGCGGTGAGCTGAAG
GAGGTCTATGATCCCTACCATGTCACCTTCTCCTTCGCCCCCGTCCCGGGGAAGGAAGGC
GAGCAGTGCGTCGCTGGGTGGAAGGCTGAGTTTGAGCCCATCACCCCCACTTCCCCGCCA
CCAGAGAAGGCCAAGGATGCCGCCCTCGGGTTTCTTAAATTGTTTGAGACTTGCGAAGCC
ACTAACTAGTAAAATGACAAAAGCTGTTGTCATCTTAATGAAGATAAGTATGAAGAAACC
TATGGGTAGGACAGCGTATAGAGTACTAGGCTTGACATGTGTAATACCTGCCTAGTACCT
TTCTGGAAGTGTGCTATGCCAAGTGCTATGTAATGTAATAACCCTGTACTAATTACTCTA
GACCCAAAAAGGAGTCCATATATGCTTCTTGTATATGTATGGCTGAAAATGAGATAATGT
GTGTGAAGATTCT