Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0372900-02
CDS Infomation	cds chromosome:IRGSP-1.0:8:17439595:17443682:-1 gene:Os08g0372900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Rhodopsin (Fragment). (Os08t0372900-01);Similar to Rhodopsin (Fragment). (Os08t0372900-02)
Sequence	ATGTCAACAACAAGCTCGTCAAAAACCGCCACGTGCCCTCTCTGCCACGCCGACGTGCTG CTGCCACGGCGGCGGTCAGCCGGCTCCTCGACGCACAGAAGCCACGACCTCGACGACGGC CCCGCTCCGCCGTCGCCGGAGTCCAGCTGCCGCAGCAACGCCGCGGTGTGCGGGTGCGCC CGCTGCCGGCGCCCTGATCTGATCAGTCCCGGAACCGGCATGCGGATGAGGAACAGATTC GGCGATGGCCCCAACAGGATATCAGCCCAGAGTGGAGCATGGCTGTGCCGAGAGCGCACG GCGGAGACTTGCCGGAGCACAAGTAGCCGGTCCGGCCGCTACCGGCGCCTGCAGCCTGCA GCGGTCGCCGGAACACGACGCGCCGAACTCATAAAGCGGCTGCAAGAGCTCTGCCACCCA GCAAATAACCTTCCAAATTGTTCTGCTTCTTGGCAACCACAGCGACAGCGGCAGAAAACA ATTGATCGAATTCCAGATAGCCTAGATTGTGGGGTGACAATGGAAAGGGGCAAGAACAAG CGTGATGGAAGTGACAATGGGCTCATCTTCTCTAACCTAATGCACGGTGTTGCTGCCGGC ATCTATGGGTATCCTCCTCACCAGGGATACACTCAGGCTCAGAGCTACCTACTGCTGCCG GAAGCATATCCACCTCCTCCGTGGACATACCCTCTTTCTAGTGCTTACCCTCCTCAACCT GTTGGTTACCCTTCAGGTGGCTACCCTCCTGCAGTCTACTCTGACTCGTATCTGCACCAA GGTAGCAGAGTTGCGCGGGAGCAATGCCCTCTATCATATTCCAATAATGCTGTCACTTGC AGGGAGGATGGGCAAATGAACTGTGAAAATGGAACAGTAAATATGGAGAAAAGTGCAATG TCCTCAAATAAGATGGCTACTAGTCTACTAAAGAGTTGCGGCAATGTGATGCCATGCAGA AATATGGAGAGAAGTGGCCCAGCCATGTATAAGGTGGACATGCGCGGCAGTACGAAGCAA TTCTCTATGGGCAGCAAGATGATGATGTGTCTGATTGTGTTTGGATGTCTGATAGCTGCC TTGGATATGTTTAGAAATGTTGCACAAAAACAGATGTTTTCTGTCGTTAGTTTACTTTCT TTTGTAGTCGCGACCTATGTCTGCTAG

Peptide Sequence

PEP ID	Os08t0372900-02
PEP Infomation	pep chromosome:IRGSP-1.0:8:17439595:17443682:-1 gene:Os08g0372900 transcript:Os08t0372900-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Rhodopsin (Fragment). (Os08t0372900-01);Similar to Rhodopsin (Fragment). (Os08t0372900-02)
Sequence	MSTTSSSKTATCPLCHADVLLPRRRSAGSSTHRSHDLDDGPAPPSPESSCRSNAAVCGCA RCRRPDLISPGTGMRMRNRFGDGPNRISAQSGAWLCRERTAETCRSTSSRSGRYRRLQPA AVAGTRRAELIKRLQELCHPANNLPNCSASWQPQRQRQKTIDRIPDSLDCGVTMERGKNK RDGSDNGLIFSNLMHGVAAGIYGYPPHQGYTQAQSYLLLPEAYPPPPWTYPLSSAYPPQP VGYPSGGYPPAVYSDSYLHQGSRVAREQCPLSYSNNAVTCREDGQMNCENGTVNMEKSAM SSNKMATSLLKSCGNVMPCRNMERSGPAMYKVDMRGSTKQFSMGSKMMMCLIVFGCLIAA LDMFRNVAQKQMFSVVSLLSFVVATYVC

Transcript Sequence

Transcript ID	Os08t0372900-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:17439595:17443682:-1 gene:Os08g0372900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Rhodopsin (Fragment). (Os08t0372900-01);Similar to Rhodopsin (Fragment). (Os08t0372900-02)
Sequence	GGTCTTTTCCGGCCGCTCCCGGCGCCCGCCGGCCATGTCAACAACAAGCTCGTCAAAAAC CGCCACGTGCCCTCTCTGCCACGCCGACGTGCTGCTGCCACGGCGGCGGTCAGCCGGCTC CTCGACGCACAGAAGCCACGACCTCGACGACGGCCCCGCTCCGCCGTCGCCGGAGTCCAG CTGCCGCAGCAACGCCGCGGTGTGCGGGTGCGCCCGCTGCCGGCGCCCTGATCTGATCAG TCCCGGAACCGGCATGCGGATGAGGAACAGATTCGGCGATGGCCCCAACAGGATATCAGC CCAGAGTGGAGCATGGCTGTGCCGAGAGCGCACGGCGGAGACTTGCCGGAGCACAAGTAG CCGGTCCGGCCGCTACCGGCGCCTGCAGCCTGCAGCGGTCGCCGGAACACGACGCGCCGA ACTCATAAAGCGGCTGCAAGAGCTCTGCCACCCAGCAAATAACCTTCCAAATTGTTCTGC TTCTTGGCAACCACAGCGACAGCGGCAGAAAACAATTGATCGAATTCCAGATAGCCTAGA TTGTGGGGTGACAATGGAAAGGGGCAAGAACAAGCGTGATGGAAGTGACAATGGGCTCAT CTTCTCTAACCTAATGCACGGTGTTGCTGCCGGCATCTATGGGTATCCTCCTCACCAGGG ATACACTCAGGCTCAGAGCTACCTACTGCTGCCGGAAGCATATCCACCTCCTCCGTGGAC ATACCCTCTTTCTAGTGCTTACCCTCCTCAACCTGTTGGTTACCCTTCAGGTGGCTACCC TCCTGCAGTCTACTCTGACTCGTATCTGCACCAAGGTAGCAGAGTTGCGCGGGAGCAATG CCCTCTATCATATTCCAATAATGCTGTCACTTGCAGGGAGGATGGGCAAATGAACTGTGA AAATGGAACAGTAAATATGGAGAAAAGTGCAATGTCCTCAAATAAGATGGCTACTAGTCT ACTAAAGAGTTGCGGCAATGTGATGCCATGCAGAAATATGGAGAGAAGTGGCCCAGCCAT GTATAAGGTGGACATGCGCGGCAGTACGAAGCAATTCTCTATGGGCAGCAAGATGATGAT GTGTCTGATTGTGTTTGGATGTCTGATAGCTGCCTTGGATATGTTTAGAAATGTTGCACA AAAACAGATGTTTTCTGTCGTTAGTTTACTTTCTTTTGTAGTCGCGACCTATGTCTGCTA GGAGTCTCTACATGTACCGTAAAATTGCTCTTTGTGTAATGTGTACTTCTTCATCCTGTA AAAATAGAATCCCAATCAAACTATATATGGTTTGTCTGTCGGGCTTTCAATACAATCTGA GTGTCCTCTCTTTACCTTTGT