Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0369200-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:17199310:17203078:1 gene:Os08g0369200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os08t0369200-01)
Sequence	ATGCCGCGCCATCTCCCCGCCGCCGCCGCCAGCCGCCGCCTCCTCTGTACCACGACCCAC CTCCTCGCCCTGCCGCCCGTCGAGCCGTCCCCGGCCGCCGACGAGCTCGCCCGCCTCCTC CTTGCGCACCACAACCCCTTCCACCCGGCCGAGTCGCCGCTCCAGCTCCTCTCCGGCGGG GGGGTCTCCCTCACGGGGGACCTCCTCGTCCAGCTCCTCCTCCGCCTCCGCGGCGCCTCC AAGCTCGCGCTGTCGCTCCTCCACGCCGCGCGCCTCCACCCTCCCCCCGCCGCCTCTTCC CGCGCCGCCGACGCCTACGACGCCGTCGTGGACGCGCTCGGCCGCGCGCGCCAGTTCGAC GCCGCGTGGAGGCTCGTCGTCGAGGCCGCGGCGGACGGCGCCGCCACGCCCCGCACGTTC GCGGTGCTCGCGAGGAGGTACGTCGCCGCCGGGATGACGCGGCAGGCGGTGCGCGCGTTC GACGACATGGAGGCGTTCGTCGGGAGGGAGCCCGACGCCGCCGAGTTCACCACGCTGCTC GACACCCTCTGCAAGTACAAGTATCCAAAGGTTGCAGCGGAAGTATTCAACAAAAGAAAA TACAAGTATGAACCAAACGAAAAGATGTACACTGTTCTAATTTATGGTTGGTGCAAGGTA AACCGAAATGACATGGCTCAGAAGTTCCTAAAAGATATGATTTATCATGGGATAGAACCC AACATAGTTACATACAACATTCTCCTCAATGGTATCTGTAGGCATGCAAGCTTGCACCCT GATTACCGGTTTGATAGAACAGTTCGTGCAGCTGAGGATCTCTTGAAAGAAATGCATCAA AGGGGAATCGAACCCAATGTTACAAGCTACTCTGTCATCCTGCATGTTTACAGTCGTGCG CATAAACCTGAACTATGTCTCTGTATGTTCCGCTCAATGAAAGAGAGAGGCATTTGTCCC ACGGTGGCAACCTACACTTCTGTGATCAAGTGCCTTGCTTCCTGTGGGAGATTGGATGAT GCTGAGAGCTTGCTTGATGAGATGGCAAGTGAGGGAGTATGCCCCTCGCCGGCCACATAC AATTGTTTCTTCAAAGAGTATCGAGGGAGAAAAGATGTGAATGGTGCCCTACAGCTGTAC AATAAGATGAAGGCCCCTGGTTCACCAGCCACACCTGATATTCACACTTACAACATACTG CTTGGAATGTTTATCAAGTTGAACCAACATGACACCGTTATGCAAGTTTGGAATGATATG TGTGAGAGCACTGTTGGTCCTGATCTCAATTCGTATACCTTGTTGGTTCATGGTTTATGT GACAATAAGAAATGGAGGGAAGCATGCCAGTTTTTCATGGAAATGATAGAGAGAGGTTTT CTTCCCCAGAAGATCACCTTTGAGACACTATATCGTGGTTTAATACAAGCAGACATGTTG AGGACCTGGAGAAGGCTGAAGAAAAGGGTTGATGAAGAAGCAGCAAAATTTGGTGAAGAA TTCAAACCATATCACATTAAGCCTTACAAGAGGTGA

Peptide Sequence

PEP ID	Os08t0369200-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:17199310:17203078:1 gene:Os08g0369200 transcript:Os08t0369200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os08t0369200-01)
Sequence	MPRHLPAAAASRRLLCTTTHLLALPPVEPSPAADELARLLLAHHNPFHPAESPLQLLSGG GVSLTGDLLVQLLLRLRGASKLALSLLHAARLHPPPAASSRAADAYDAVVDALGRARQFD AAWRLVVEAAADGAATPRTFAVLARRYVAAGMTRQAVRAFDDMEAFVGREPDAAEFTTLL DTLCKYKYPKVAAEVFNKRKYKYEPNEKMYTVLIYGWCKVNRNDMAQKFLKDMIYHGIEP NIVTYNILLNGICRHASLHPDYRFDRTVRAAEDLLKEMHQRGIEPNVTSYSVILHVYSRA HKPELCLCMFRSMKERGICPTVATYTSVIKCLASCGRLDDAESLLDEMASEGVCPSPATY NCFFKEYRGRKDVNGALQLYNKMKAPGSPATPDIHTYNILLGMFIKLNQHDTVMQVWNDM CESTVGPDLNSYTLLVHGLCDNKKWREACQFFMEMIERGFLPQKITFETLYRGLIQADML RTWRRLKKRVDEEAAKFGEEFKPYHIKPYKR

Transcript Sequence

Transcript ID	Os08t0369200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:17199310:17203078:1 gene:Os08g0369200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os08t0369200-01)
Sequence	CGCTTCACCACGCTCCTCCATCCACCAACTCCGGCCACGCCGCCGCCGCCTGCCATGCCG CGCCATCTCCCCGCCGCCGCCGCCAGCCGCCGCCTCCTCTGTACCACGACCCACCTCCTC GCCCTGCCGCCCGTCGAGCCGTCCCCGGCCGCCGACGAGCTCGCCCGCCTCCTCCTTGCG CACCACAACCCCTTCCACCCGGCCGAGTCGCCGCTCCAGCTCCTCTCCGGCGGGGGGGTC TCCCTCACGGGGGACCTCCTCGTCCAGCTCCTCCTCCGCCTCCGCGGCGCCTCCAAGCTC GCGCTGTCGCTCCTCCACGCCGCGCGCCTCCACCCTCCCCCCGCCGCCTCTTCCCGCGCC GCCGACGCCTACGACGCCGTCGTGGACGCGCTCGGCCGCGCGCGCCAGTTCGACGCCGCG TGGAGGCTCGTCGTCGAGGCCGCGGCGGACGGCGCCGCCACGCCCCGCACGTTCGCGGTG CTCGCGAGGAGGTACGTCGCCGCCGGGATGACGCGGCAGGCGGTGCGCGCGTTCGACGAC ATGGAGGCGTTCGTCGGGAGGGAGCCCGACGCCGCCGAGTTCACCACGCTGCTCGACACC CTCTGCAAGTACAAGTATCCAAAGGTTGCAGCGGAAGTATTCAACAAAAGAAAATACAAG TATGAACCAAACGAAAAGATGTACACTGTTCTAATTTATGGTTGGTGCAAGGTAAACCGA AATGACATGGCTCAGAAGTTCCTAAAAGATATGATTTATCATGGGATAGAACCCAACATA GTTACATACAACATTCTCCTCAATGGTATCTGTAGGCATGCAAGCTTGCACCCTGATTAC CGGTTTGATAGAACAGTTCGTGCAGCTGAGGATCTCTTGAAAGAAATGCATCAAAGGGGA ATCGAACCCAATGTTACAAGCTACTCTGTCATCCTGCATGTTTACAGTCGTGCGCATAAA CCTGAACTATGTCTCTGTATGTTCCGCTCAATGAAAGAGAGAGGCATTTGTCCCACGGTG GCAACCTACACTTCTGTGATCAAGTGCCTTGCTTCCTGTGGGAGATTGGATGATGCTGAG AGCTTGCTTGATGAGATGGCAAGTGAGGGAGTATGCCCCTCGCCGGCCACATACAATTGT TTCTTCAAAGAGTATCGAGGGAGAAAAGATGTGAATGGTGCCCTACAGCTGTACAATAAG ATGAAGGCCCCTGGTTCACCAGCCACACCTGATATTCACACTTACAACATACTGCTTGGA ATGTTTATCAAGTTGAACCAACATGACACCGTTATGCAAGTTTGGAATGATATGTGTGAG AGCACTGTTGGTCCTGATCTCAATTCGTATACCTTGTTGGTTCATGGTTTATGTGACAAT AAGAAATGGAGGGAAGCATGCCAGTTTTTCATGGAAATGATAGAGAGAGGTTTTCTTCCC CAGAAGATCACCTTTGAGACACTATATCGTGGTTTAATACAAGCAGACATGTTGAGGACC TGGAGAAGGCTGAAGAAAAGGGTTGATGAAGAAGCAGCAAAATTTGGTGAAGAATTCAAA CCATATCACATTAAGCCTTACAAGAGGTGATCCGCCACCATTGGCAAGATATGATATGTT CATTCTTTTGATTGGTTCAAGTTGTACCATAGCCTCCAAATTATGTTGATCCGCCACCAT TGGCAAGATATTCCATTTGACTTTCCCTTGAGTAGAGCTCGAATGGAATATCCATCCTGG TAATTGAGCAATTGAAAAGAGTGCGTCTTACCAGAAGGACACGCGAGAAAAGGTTGAAGA ACTAAGTCGCATTGTTGCCAGATTTTGTAAAGGCACGATCGCTTAAAGATGTGGGCCATA ATACTAGGTACATCAATTTAACATGAGTAAATTGTAATTCTTTGGTGTGTTTGGAGAAAC TTGAAGTTGAAGGTAAGCTACTTCTTCCTACTGCAGTTCAGATATTCACTTTGAAGTTCA CATGAGTGAAAAAGATTCTATGAAGCCAGTTGTGAATAATTTCTGCATCTCTTTTACTCT CCTTTTTTACCAGTCGAGGTATGGCTATGTCCCAGGTTCAAAGGCTTGCATTGGCTACTT GGAGAAACTGCACGGCTGAAATTTCTCGCGAACCAATCGAGCTTCTGGAGATGGATATGG TTGTTGGCTTCATTTGCATGATGATGCTCAAGACTTTGTTTATATTGTCCCAGCACAGGG CATCTGATAGGGTTAAGTTTGAGTCTGTCTTCGTAGAACAGCGATATCTCTTGTTATATT GTCCCAGCACAGGGCATCTGATAGGGTTCAGGTTTGAGTCTGTCTTTGTAGAACAGCGAT ATCTCTTGACTGTCAGTACTTTATTTCACAGAAACTAGTGTAGGTTTGTTCCTACAAGAT CCAAGTTTTTTTTTTATTACAAATAGGTTTAAGCAACATCAAAATGAATATGTTTAAATG TAAGATATTAGTAAAATGCTTTTGATTCGAATCTAATTATACAACTTTGTTGGT