Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0369000-01
CDS Infomation

cds chromosome:IRGSP-1.0:8:17193679:17195863:1 gene:Os08g0369000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Permease 1. (Os08t0369000-01)
Sequence

ATTGGGAGGTGCGTGGAGATTGGGCTTCCAATGCTTGTCCTGTTTGTTGCTCTTTCCCAA
TATCTGAAGCATGTACAAGTGCGCCATTTTCCGATATTGGAGAGGTTCTCAGTGCTCATT
TCGATCGCGCTTGTCTGGGTTTATGCTCACATCCTCACAGCAAGTGGGACATACAAACAT
ACCTCTCTGCTCACCCAGATAAACTGCCGAACAGACCGTGCCAATCTCATCACTTCTGCA
GACTGGATTGACATCCCATACCCACTGCAATGGGGTCCGCCAACATTCAGCGCAGATCAT
GCATTTGGTATGATGGCTGCTGTTGTGGTGTCCTTGATAGAGTCAGCTGGAGCATTCAAG
GCTGCTGCGCGGTTGGCGAGTGCAACACCCCCACCACCATATGTCCTCAGCAGAGGCATT
GGATGGCAGGGAATTGGGCTGCTGTTTGATGGGCTATTTGGTACTGGAACTGGCTCCACG
GTCTCTGTAGAGAACATTGGTCTTCTTGGATCAACCAGGATTGGCAGCAGAAGAGTGATA
CAGATCTCCGCTGGTTTCATGATCTTCTTCTCCATTCTAGGGAGATTTGGGGCTCTGTTT
GCTTCGATTCCATTCACAATGTTTGCCGCCATATACTGCGTCATGTTTGGATATGTTGGT
GCAGTGGGGCTCTCCTTCATGCAGTTCACCAACATGAACTCGATGCGCAGCCTCTTCATC
ATCGGCGTCTCGCTGTTCCTCGGCATTTCCATCCCGGAGTACTTCTTCCGCTACACCATG
AGCGCTCTGCACGGCCCTGCACACACCAGGGCAGGATGGTTCAATGACTACATCAACACC
GTCTTCTCCTCGCCCCCGACCGTCGGTCTGATCGTCGCGGTGATCCTCGACAACACCCTG
GAGGTGAGGGATGCGGCGAGGGACCGGGGGATGCCATGGTGGGCGAGGTTCAGGACGTTC
AGAGGCGACAGCCGGAATGAGGAGTTCTACACCCTGCCCTTCAACCTCAACCGGTTCTTC
CCTCCATCTTAA

Peptide Sequence

PEP ID

Os08t0369000-01
PEP Infomation

pep chromosome:IRGSP-1.0:8:17193679:17195863:1 gene:Os08g0369000 transcript:Os08t0369000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Permease 1. (Os08t0369000-01)
Sequence

IGRCVEIGLPMLVLFVALSQYLKHVQVRHFPILERFSVLISIALVWVYAHILTASGTYKH
TSLLTQINCRTDRANLITSADWIDIPYPLQWGPPTFSADHAFGMMAAVVVSLIESAGAFK
AAARLASATPPPPYVLSRGIGWQGIGLLFDGLFGTGTGSTVSVENIGLLGSTRIGSRRVI
QISAGFMIFFSILGRFGALFASIPFTMFAAIYCVMFGYVGAVGLSFMQFTNMNSMRSLFI
IGVSLFLGISIPEYFFRYTMSALHGPAHTRAGWFNDYINTVFSSPPTVGLIVAVILDNTL
EVRDAARDRGMPWWARFRTFRGDSRNEEFYTLPFNLNRFFPPS

Transcript Sequence

Transcript ID

Os08t0369000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:17193679:17195863:1 gene:Os08g0369000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Permease 1. (Os08t0369000-01)
Sequence

GATTGGGAGGTGCGTGGAGATTGGGCTTCCAATGCTTGTCCTGTTTGTTGCTCTTTCCCA
ATATCTGAAGCATGTACAAGTGCGCCATTTTCCGATATTGGAGAGGTTCTCAGTGCTCAT
TTCGATCGCGCTTGTCTGGGTTTATGCTCACATCCTCACAGCAAGTGGGACATACAAACA
TACCTCTCTGCTCACCCAGATAAACTGCCGAACAGACCGTGCCAATCTCATCACTTCTGC
AGACTGGATTGACATCCCATACCCACTGCAATGGGGTCCGCCAACATTCAGCGCAGATCA
TGCATTTGGTATGATGGCTGCTGTTGTGGTGTCCTTGATAGAGTCAGCTGGAGCATTCAA
GGCTGCTGCGCGGTTGGCGAGTGCAACACCCCCACCACCATATGTCCTCAGCAGAGGCAT
TGGATGGCAGGGAATTGGGCTGCTGTTTGATGGGCTATTTGGTACTGGAACTGGCTCCAC
GGTCTCTGTAGAGAACATTGGTCTTCTTGGATCAACCAGGATTGGCAGCAGAAGAGTGAT
ACAGATCTCCGCTGGTTTCATGATCTTCTTCTCCATTCTAGGGAGATTTGGGGCTCTGTT
TGCTTCGATTCCATTCACAATGTTTGCCGCCATATACTGCGTCATGTTTGGATATGTTGG
TGCAGTGGGGCTCTCCTTCATGCAGTTCACCAACATGAACTCGATGCGCAGCCTCTTCAT
CATCGGCGTCTCGCTGTTCCTCGGCATTTCCATCCCGGAGTACTTCTTCCGCTACACCAT
GAGCGCTCTGCACGGCCCTGCACACACCAGGGCAGGATGGTTCAATGACTACATCAACAC
CGTCTTCTCCTCGCCCCCGACCGTCGGTCTGATCGTCGCGGTGATCCTCGACAACACCCT
GGAGGTGAGGGATGCGGCGAGGGACCGGGGGATGCCATGGTGGGCGAGGTTCAGGACGTT
CAGAGGCGACAGCCGGAATGAGGAGTTCTACACCCTGCCCTTCAACCTCAACCGGTTCTT
CCCTCCATCTTAAAGACAAGCTCTTGGAGGCAAGGAGAGCTAAAGCATTAGGAATGGAAG
CCGGCCATTGAGTGAATCTAACCATCCCCACCATGGTTGTAATTGTGGTTGTGTTCTCCA
TAGTGAAACTAAGAGTAGAGAGGTAGATGTAGAAGAAGTAGAGCAAAAGAAATGCTGGGA
ATGGCTAGAAACTCCAGTCTTTACCAGCAAGAACAAAAAAAAGGATGGAAATTGGTTGGG
TTTGATGGAATGCTTGCCTGGATTCATTGTACATGCATTTTGAGTTCATGGTTAGTGATG
AGCAATGAGATTGACTTGATCTGTTTC