Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0366000-03
CDS Infomation	cds chromosome:IRGSP-1.0:8:16964834:16970023:-1 gene:Os08g0366000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:phosphoenolpyruvate carboxylase, phosphoenolpyruvate carboxylase 2a, PEPCase 2a description:Phosphoenolpyruvate carboxylase. (Os08t0366000-01);Phosphoenolpyruvate carboxylase. (Os08t0366000-02);Similar to Phosphoenolpyruvate carboxylase. (Os08t0366000-03);Similar to Phosphoenolpyruvate carboxylase. (Os08t0366000-04)
Sequence	GTCCAAGAATGCTATGAGATCGCTGCTGAGTATGAAGGGAAGCATGACTCCCAAAAGCTC GATGAACTTGGCAACATGTTGACAAGCTTGGATCCTGGTGACTCCATTGTGATGGCCAAA GCTTTCTCCCACATGCTTAATTTGGCTAACTTGGCCGAGGAGGTCCAGATTGCATACAGG AGGAGAATCAAGCTCAAGAAGGGTGACTTTGCTGATGAGAACTCGGCACTGACAGAATCT GACATTGAAGAAACTTTTAAGAGGCTTGTTGTTGACCTGAAGAAATCACCAGCAGAGGTC TTTGATGCCCTTAAGAGTCAGACTGTTGACCTGGTTTTGACTGCACATCCAACACAGTCA GTGAGGAGGTCACTGCTTCAAAAACACTCAAGGATAAGGAATTGTTTGGTTCAACTATAC TCAAAGGATATCACACCAGATGATAAACAGGAGCTTGATGAGGCTCTCCAGAGGGAGATT CAAGCAGCCTTTAGAACTGATGAGATCCGAAGAACCCAGCCAACTCCTCAAGATGAAATG AGGGCTGGTATGAGTTACTTTCATGAGACAATCTGGAAAGGTGTTCCGAAGTTCTTACGC CGTCTGGACACTGCCTTGAAGAACATCGGAATTGATGAGCGTGTTCCTTATAATGCACCT CTCATTCAGTTCTCTTCTTGGATGGGAGGAGACCGTGATGGAAATCCAAGAGTGACACCA GAAGTCACAAGGGATGTATGCTTGCTTGCTAGAATGATGGCTTCAAATTTATACTGCTCG CAAATTGAGGATCTCATGTTTGAGCTGTCTATGTGGCGATGCAATGATGAGCTTCGGGCA CGAGCAGATGAGCTGCATCTCTCCTCAAAGAAAGATGCAAAGCACTATATAGAATTCTGG AAGAAGGTTCCGCCCAGTGAGCCATACCGAGTTGTTCTAGGTGATGTGAGAGACAAGCTG TACAACACACGTGAACGAGCACGCCAGTTATTATCCAGCGGATATTCTGACATTCCTGAA GAAACCACTCTCACCAGTGTTGAACAGTTCTTAGAGCCTCTGGAGCTATGTTACAGGTCA CTCTGCGATTGCGGTGACCGTGTAATTGCTGATGGGACCCTTCTGGACTTCTTGCGCCAG GTGTCTACCTTTGGGCTGTGCCTTGTGAGGCTTGACATTAGGCAAGAATCTGACAGGCAC ACCGATGTCCTCGATGCCATCACCACATACCTGGGAATAGGATCATACCGTGAGTGGTCC GAGGAACGCCGTCAGGACTGGCTCTTGTCTGAACTCAATGGGAAGCGCCCATTGTTTGGC CCAGACCTTCCCAAGACCGATGAGATTGCTGACGTTCTAGACACGTTCCGCGTGATAGCT GAGCTTCCCGCTGACAATTTTGGGGCCTATATCATTTCCATGGCGACAGCTCCGTCAGAC GTGCTTGCTGTTGAGCTCCTCCAACGTGAATGCCATGTGAAGACACCACTTAGAGTTGTC CCACTGTTTGAGAAGTTGGCTGATCTTGAATCTGCCCCAGCAGCAGTGGCCAGACTGTTC TCCATAGATTGGTACAGAGAAAGGATAAATGGCAAACAGGAGGTCATGATTGGCTATTCG GACTCGGGTAAGGACGCCGGTCGTCTCTCGGCAGCTTGGCAGCTGTACAAGTCTCAGGAG GAGCTCATCAACGTTGCCAAGGAGTTTGGGGTGAAGTTGACAATGTTCCATGGGCGCGGT GGGACTGTCGGAAGAGGCGGAGGTCCCACTCATCTTGCCATCTTGTCTCAGCCACCAGAC ACAATCCATGGATCTCTCCGGGTCACTGTCCAGGGTGAAGTCATTGAGCAGTCCTTTGGT GAGGAGCACCTTTGCTTCAGGACACTGCAGCGTTTCACGGCTGCCACTCTGGAGCATGGC ATGCATCCACCAATTGCGCCGAAACCAGAATGGCGTGCTCTGCTTGATGAGATGGCTGTG GTGGCTACAAAGGAATACCGGTCCATCGTCTTCCAGGAACCACGCTTTGTCGAGTATTTC CGCCTTGCAACACCAGAGATGGAGTATGGAAGGATGAATATAGGAAGCAGGCCATCCAAG AGAAAGCCGAGTGGTGGCATCGAGTCACTCCGTGCCATCCCATGGATCTTCGCGTGGACG CAAACTCGCTTCCACCTTCCTGTCTGGCTTGGCTTCGGTTCTGCCTTCAAGCACATCCTG GAGAAGGACATCAGGAACCTCCACATGCTCCAGGAGATGTACAATGAGTGGCCGTTCTTC AGAGTCACGATCGATCTGGTTGAGATGGTTTTCGCCAAGGGTGACCCTGGCATCGCCGCA TTGTACGACAAGCTCCTTGTCTCCGAGGAGCTATGGCCTCTGGGAGAGAAACTGAGGGCC AACTGTGAAGAAACCAAACAGCTTCTCCTTCAGGTTGCTGGACACAAGGATCTTCTCGAA GGTGATCTCTACCTGAAGCAGCGCCTTCGCCTCCGCAATGCCTACATCACCACCCTGAAT GTCTGCCAGGCTTACACGATGAAGCGAATCCGCGACCCGGACTACCATGTCACGCTGCGC CCCCACATGTCCAAGGAGATCATGGACTGGTCTAAGCCGGCTGCGGAGCTGGTGAAGCTG AACCCGACCAGTGAGTATGCGCCGGGGCTGGAGGACACCCTCATCCTGACCATGAAGGGA ATTGCTGCTGGAATGCAGAACACCGGCTAA

Peptide Sequence

PEP ID	Os08t0366000-03
PEP Infomation	pep chromosome:IRGSP-1.0:8:16964834:16970023:-1 gene:Os08g0366000 transcript:Os08t0366000-03 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:phosphoenolpyruvate carboxylase, phosphoenolpyruvate carboxylase 2a, PEPCase 2a description:Phosphoenolpyruvate carboxylase. (Os08t0366000-01);Phosphoenolpyruvate carboxylase. (Os08t0366000-02);Similar to Phosphoenolpyruvate carboxylase. (Os08t0366000-03);Similar to Phosphoenolpyruvate carboxylase. (Os08t0366000-04)
Sequence	VQECYEIAAEYEGKHDSQKLDELGNMLTSLDPGDSIVMAKAFSHMLNLANLAEEVQIAYR RRIKLKKGDFADENSALTESDIEETFKRLVVDLKKSPAEVFDALKSQTVDLVLTAHPTQS VRRSLLQKHSRIRNCLVQLYSKDITPDDKQELDEALQREIQAAFRTDEIRRTQPTPQDEM RAGMSYFHETIWKGVPKFLRRLDTALKNIGIDERVPYNAPLIQFSSWMGGDRDGNPRVTP EVTRDVCLLARMMASNLYCSQIEDLMFELSMWRCNDELRARADELHLSSKKDAKHYIEFW KKVPPSEPYRVVLGDVRDKLYNTRERARQLLSSGYSDIPEETTLTSVEQFLEPLELCYRS LCDCGDRVIADGTLLDFLRQVSTFGLCLVRLDIRQESDRHTDVLDAITTYLGIGSYREWS EERRQDWLLSELNGKRPLFGPDLPKTDEIADVLDTFRVIAELPADNFGAYIISMATAPSD VLAVELLQRECHVKTPLRVVPLFEKLADLESAPAAVARLFSIDWYRERINGKQEVMIGYS DSGKDAGRLSAAWQLYKSQEELINVAKEFGVKLTMFHGRGGTVGRGGGPTHLAILSQPPD TIHGSLRVTVQGEVIEQSFGEEHLCFRTLQRFTAATLEHGMHPPIAPKPEWRALLDEMAV VATKEYRSIVFQEPRFVEYFRLATPEMEYGRMNIGSRPSKRKPSGGIESLRAIPWIFAWT QTRFHLPVWLGFGSAFKHILEKDIRNLHMLQEMYNEWPFFRVTIDLVEMVFAKGDPGIAA LYDKLLVSEELWPLGEKLRANCEETKQLLLQVAGHKDLLEGDLYLKQRLRLRNAYITTLN VCQAYTMKRIRDPDYHVTLRPHMSKEIMDWSKPAAELVKLNPTSEYAPGLEDTLILTMKG IAAGMQNTG

Transcript Sequence

Transcript ID	Os08t0366000-03
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:16964834:16970023:-1 gene:Os08g0366000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:phosphoenolpyruvate carboxylase, phosphoenolpyruvate carboxylase 2a, PEPCase 2a description:Phosphoenolpyruvate carboxylase. (Os08t0366000-01);Phosphoenolpyruvate carboxylase. (Os08t0366000-02);Similar to Phosphoenolpyruvate carboxylase. (Os08t0366000-03);Similar to Phosphoenolpyruvate carboxylase. (Os08t0366000-04)
Sequence	TCTGCTACTCCTACTCTGCTACCTGCATGTTCATGCTCCAGATCAGCAGATAATGCTTGC TTGTTTGCTTGCTGCCTGCGTGTGCGCGCTTGTGAATATCTTCTTTTTTTTTAATGGAGT GATTTGGTTGCTTGTGGACTGATTGACTGACTCACTCACTGAATGATTGGATTAGCTTTT GTGAGTGGGATTGTGGGGATTCTGTGCTTCAGCATAATTGGAACATGGAGAGTGCCCATG TTTTTGGGGGTGCTTTCTGCTTTTTCTTTATTTTAATTTGGGGGTAAAAAACCAAAATAT TCCAACAGTTTCTTCCTTTATTTTTTAGTTTGTCGGTTGACAAGTTGGTGCTTCCAGTGA GGGTACTGAGTGGAGTTTTCGTTCTGGGGCCTGCCCCTTTCTTCTTCTTCTTTTTTAGAG TATTCGGATTATGTTTCTGGGTTAAAATATGTGTTTGAATTATTGTGTTCGTATAATGGA AATTCAGAAAAAAAACTGGCATCTTTTGCATTTGGAGCTGTTTTCCAGGGGTGTATGTAC TGAAATCTGAATATTTACTGTTTGAGTCAAATCTGAGCTGAACTTTAATTATCTATCCTG AATTCCTGATTGATTAACAACTGCCACTTTGTATAAACAACAGTTTCATAGACATCCATC GTAACTGAACACTTCATTTTTATCAAATTTTAAGCAGAGGAAGTCAAAGACATGGGTGTC AAATGTTTGTGTTTTTTATTTTTGTTGTTTCGTCAAACTGAATGTGACATGTACTCATTA GTTGGATCTTTAGGATATCAGGAAATGACAACTGTATATTAAAAGTTTTATATTGACAAA CCAACATGAATTCTTTGGTATTGCTAGAGCCTTGCTTAAGTACTTACTCCTGTGCAAAAA TTTTGAGGTTTAGTGCCCTAGTGTGCTCAGGTTTGGTGCTTTTGTATTTGAAGTCTTCAT TTGCAGACGTGGCTGCAATTTTTTATAGAAGGGTAAATTGTGAATGAAATCTGAGTTGAT CTTTAATTGTATATTCTGTATATCTATCAACCACTTTAATGATTACAACAAAAATTCCAG CTTTACATGAACATGCCATGAACTTCCGTTGAAAGTGAATAACTTGGCTTTGTCAGTTCC CCGTGTGGCCAATGTTCATGCACGAGACTAATATTGAATACAATTTGTTTTGTCAAAATA AACTGATACCTTTGTTGCAGACCCTTCCATGGATGTATGACAAGGAATTTTTTTTTTACT TTGATGTATAGTCAATTAGTTTGATTTTTTTTTGTTCTGAATTGATTGGAAAATAATGCC TGTATTTACAATTTTATATCAACGGAAAAACCATGGATTGCTAATTTGTTATTGATATGT GTAGGTCCAAGAATGCTATGAGATCGCTGCTGAGTATGAAGGGAAGCATGACTCCCAAAA GCTCGATGAACTTGGCAACATGTTGACAAGCTTGGATCCTGGTGACTCCATTGTGATGGC CAAAGCTTTCTCCCACATGCTTAATTTGGCTAACTTGGCCGAGGAGGTCCAGATTGCATA CAGGAGGAGAATCAAGCTCAAGAAGGGTGACTTTGCTGATGAGAACTCGGCACTGACAGA ATCTGACATTGAAGAAACTTTTAAGAGGCTTGTTGTTGACCTGAAGAAATCACCAGCAGA GGTCTTTGATGCCCTTAAGAGTCAGACTGTTGACCTGGTTTTGACTGCACATCCAACACA GTCAGTGAGGAGGTCACTGCTTCAAAAACACTCAAGGATAAGGAATTGTTTGGTTCAACT ATACTCAAAGGATATCACACCAGATGATAAACAGGAGCTTGATGAGGCTCTCCAGAGGGA GATTCAAGCAGCCTTTAGAACTGATGAGATCCGAAGAACCCAGCCAACTCCTCAAGATGA AATGAGGGCTGGTATGAGTTACTTTCATGAGACAATCTGGAAAGGTGTTCCGAAGTTCTT ACGCCGTCTGGACACTGCCTTGAAGAACATCGGAATTGATGAGCGTGTTCCTTATAATGC ACCTCTCATTCAGTTCTCTTCTTGGATGGGAGGAGACCGTGATGGAAATCCAAGAGTGAC ACCAGAAGTCACAAGGGATGTATGCTTGCTTGCTAGAATGATGGCTTCAAATTTATACTG CTCGCAAATTGAGGATCTCATGTTTGAGCTGTCTATGTGGCGATGCAATGATGAGCTTCG GGCACGAGCAGATGAGCTGCATCTCTCCTCAAAGAAAGATGCAAAGCACTATATAGAATT CTGGAAGAAGGTTCCGCCCAGTGAGCCATACCGAGTTGTTCTAGGTGATGTGAGAGACAA GCTGTACAACACACGTGAACGAGCACGCCAGTTATTATCCAGCGGATATTCTGACATTCC TGAAGAAACCACTCTCACCAGTGTTGAACAGTTCTTAGAGCCTCTGGAGCTATGTTACAG GTCACTCTGCGATTGCGGTGACCGTGTAATTGCTGATGGGACCCTTCTGGACTTCTTGCG CCAGGTGTCTACCTTTGGGCTGTGCCTTGTGAGGCTTGACATTAGGCAAGAATCTGACAG GCACACCGATGTCCTCGATGCCATCACCACATACCTGGGAATAGGATCATACCGTGAGTG GTCCGAGGAACGCCGTCAGGACTGGCTCTTGTCTGAACTCAATGGGAAGCGCCCATTGTT TGGCCCAGACCTTCCCAAGACCGATGAGATTGCTGACGTTCTAGACACGTTCCGCGTGAT AGCTGAGCTTCCCGCTGACAATTTTGGGGCCTATATCATTTCCATGGCGACAGCTCCGTC AGACGTGCTTGCTGTTGAGCTCCTCCAACGTGAATGCCATGTGAAGACACCACTTAGAGT TGTCCCACTGTTTGAGAAGTTGGCTGATCTTGAATCTGCCCCAGCAGCAGTGGCCAGACT GTTCTCCATAGATTGGTACAGAGAAAGGATAAATGGCAAACAGGAGGTCATGATTGGCTA TTCGGACTCGGGTAAGGACGCCGGTCGTCTCTCGGCAGCTTGGCAGCTGTACAAGTCTCA GGAGGAGCTCATCAACGTTGCCAAGGAGTTTGGGGTGAAGTTGACAATGTTCCATGGGCG CGGTGGGACTGTCGGAAGAGGCGGAGGTCCCACTCATCTTGCCATCTTGTCTCAGCCACC AGACACAATCCATGGATCTCTCCGGGTCACTGTCCAGGGTGAAGTCATTGAGCAGTCCTT TGGTGAGGAGCACCTTTGCTTCAGGACACTGCAGCGTTTCACGGCTGCCACTCTGGAGCA TGGCATGCATCCACCAATTGCGCCGAAACCAGAATGGCGTGCTCTGCTTGATGAGATGGC TGTGGTGGCTACAAAGGAATACCGGTCCATCGTCTTCCAGGAACCACGCTTTGTCGAGTA TTTCCGCCTTGCAACACCAGAGATGGAGTATGGAAGGATGAATATAGGAAGCAGGCCATC CAAGAGAAAGCCGAGTGGTGGCATCGAGTCACTCCGTGCCATCCCATGGATCTTCGCGTG GACGCAAACTCGCTTCCACCTTCCTGTCTGGCTTGGCTTCGGTTCTGCCTTCAAGCACAT CCTGGAGAAGGACATCAGGAACCTCCACATGCTCCAGGAGATGTACAATGAGTGGCCGTT CTTCAGAGTCACGATCGATCTGGTTGAGATGGTTTTCGCCAAGGGTGACCCTGGCATCGC CGCATTGTACGACAAGCTCCTTGTCTCCGAGGAGCTATGGCCTCTGGGAGAGAAACTGAG GGCCAACTGTGAAGAAACCAAACAGCTTCTCCTTCAGGTTGCTGGACACAAGGATCTTCT CGAAGGTGATCTCTACCTGAAGCAGCGCCTTCGCCTCCGCAATGCCTACATCACCACCCT GAATGTCTGCCAGGCTTACACGATGAAGCGAATCCGCGACCCGGACTACCATGTCACGCT GCGCCCCCACATGTCCAAGGAGATCATGGACTGGTCTAAGCCGGCTGCGGAGCTGGTGAA GCTGAACCCGACCAGTGAGTATGCGCCGGGGCTGGAGGACACCCTCATCCTGACCATGAA GGGAATTGCTGCTGGAATGCAGAACACCGGCTAAGCGAACTATCAACTATGAAGTGCCTG AATTCACACCGTTTTATATGGACTCTTATCTTGATTTCGGTCATTTGCTCTCGGCCATTT AATTTTGCCGATGCAGAGGCTCGTGCAGTTTCTAATTTCTTTCGGAAGATATTTTCAATA ATGGAGTTGTACAAGAACATCAATTAATCAAAATAAAGTGGATATTATGTTCATT