Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0365900-02
CDS Infomation

cds chromosome:IRGSP-1.0:8:16946645:16957883:-1 gene:Os08g0365900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p domain containing protein. (Os08t0365900-01);Similar to NOL1/NOP2/sun family protein. (Os08t0365900-02)
Sequence

TGTGCAGAGTCGGTTCTTAGAGGAGCCCAGGTGTACATCCCAGGAGTTTTAGCTTGCAGC
TCACATGTTGAAAAGGGTGACAAAGTTGCAGTGTCGGTTGCTATTGAACAACCTGCTGAG
GATGGTGGTTGGACCGTTGGTATAACACGAGGAACTGTTTTACAGGGATTGCAGTCAGAT
GCACATCATGAAGAAAGAAAGGGTTTGTACATTGGTCAAGGGATCACTGCAATGTCAAGG
TCCGGAATATTTCGTGTTCCTCATGGAGTTGCAGTGGAGATGACTGAGAGGGTGTACAAG
CTCCCATCTTTCAATGATGTGCTCGAAGGGGAGATATTTCTTCAGAATCTTCCAAGTGTT
GTGGCTGCTCGTGTCCTTGATCCCCAGCCTGGAGAGCGGATTCTGGACATGTGTGCTGCC
CCAGGTGGGAAAACAACAGCAATTGCTATCCTGATGAAAGACCAAGGAGAAATTATTGCC
CTTGATAGATCTCACAATAAGGTGATGGATATTTTGAAGTTGGCCGCTGAGATGGACCTA
AATTGCATAAAAGCTTATAAGCTTGATGCACTCAAATCTGTACGGAAGACCAATGAAGCA
AAATATATTGGCGAAGCAGGCAGCCGCACTGATGCAATTGTGACACTGGCAGAGGACTCT
GAGCCTTGTATTAATAAAGTCGATGCTGGGACTACTAATGCCAGTGAAGACAGTTCTACT
ACATCAGTTGTTCAGACTGATAACAAAAAAACAGATGATAAAAGATATGTGAGCAAGGCA
GACCTCAGGAAGAACTTAAGGCGAATGAGGAATGGACCAGGAAGAAATAACTGCTCAGGT
GGTAGAGTTGAAAATTCTAAAGGATTTTTGCCCAATAGCTTTGATCGTGTCCTCCTTGAT
GCTCCATGTTCTGCACTTGGCTTAAGGCCTCGCCTCTTTGCTGGTGAGGAAACGCTGGAA
TCACTGAGAAATCATGCGACGTACCAGAGAAGAATGTTTGATCAAGCTGTCAAGCTAGTT
CACCCTGGTGGGGTGATTGTTTATTCCACGTGTACTATAAATCCAGGAGAAAATGAAGCT
TTGGTCAGATATGCATTGGATAAGTACAAGTTTTTGTCGCTCGGATCACAGCACCCAAAA
GTTGGAGGACCTGGTATTGTTGGTTCATTTGAGCGATCAACCAAGAAATATACTGAGGAG
TGGTTGACAAAGCATGAATCACAACTTGTCCAGAGATTCGATCCATCATCAACTCTGGAT
ACAATTGGTTTCTTCATTGCAAAGTTTGATGTTGGGCAGAAAGACGACTGA

Peptide Sequence

PEP ID

Os08t0365900-02
PEP Infomation

pep chromosome:IRGSP-1.0:8:16946645:16957883:-1 gene:Os08g0365900 transcript:Os08t0365900-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p domain containing protein. (Os08t0365900-01);Similar to NOL1/NOP2/sun family protein. (Os08t0365900-02)
Sequence

CAESVLRGAQVYIPGVLACSSHVEKGDKVAVSVAIEQPAEDGGWTVGITRGTVLQGLQSD
AHHEERKGLYIGQGITAMSRSGIFRVPHGVAVEMTERVYKLPSFNDVLEGEIFLQNLPSV
VAARVLDPQPGERILDMCAAPGGKTTAIAILMKDQGEIIALDRSHNKVMDILKLAAEMDL
NCIKAYKLDALKSVRKTNEAKYIGEAGSRTDAIVTLAEDSEPCINKVDAGTTNASEDSST
TSVVQTDNKKTDDKRYVSKADLRKNLRRMRNGPGRNNCSGGRVENSKGFLPNSFDRVLLD
APCSALGLRPRLFAGEETLESLRNHATYQRRMFDQAVKLVHPGGVIVYSTCTINPGENEA
LVRYALDKYKFLSLGSQHPKVGGPGIVGSFERSTKKYTEEWLTKHESQLVQRFDPSSTLD
TIGFFIAKFDVGQKDD

Transcript Sequence

Transcript ID

Os08t0365900-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:16946645:16957883:-1 gene:Os08g0365900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p domain containing protein. (Os08t0365900-01);Similar to NOL1/NOP2/sun family protein. (Os08t0365900-02)
Sequence

AATGTGCAGAGTCGGTTCTTAGAGGAGCCCAGGTGTACATCCCAGGAGTTTTAGCTTGCA
GCTCACATGTTGAAAAGGGTGACAAAGTTGCAGTGTCGGTTGCTATTGAACAACCTGCTG
AGGATGGTGGTTGGACCGTTGGTATAACACGAGGAACTGTTTTACAGGGATTGCAGTCAG
ATGCACATCATGAAGAAAGAAAGGGTTTGTACATTGGTCAAGGGATCACTGCAATGTCAA
GGTCCGGAATATTTCGTGTTCCTCATGGAGTTGCAGTGGAGATGACTGAGAGGGTGTACA
AGCTCCCATCTTTCAATGATGTGCTCGAAGGGGAGATATTTCTTCAGAATCTTCCAAGTG
TTGTGGCTGCTCGTGTCCTTGATCCCCAGCCTGGAGAGCGGATTCTGGACATGTGTGCTG
CCCCAGGTGGGAAAACAACAGCAATTGCTATCCTGATGAAAGACCAAGGAGAAATTATTG
CCCTTGATAGATCTCACAATAAGGTGATGGATATTTTGAAGTTGGCCGCTGAGATGGACC
TAAATTGCATAAAAGCTTATAAGCTTGATGCACTCAAATCTGTACGGAAGACCAATGAAG
CAAAATATATTGGCGAAGCAGGCAGCCGCACTGATGCAATTGTGACACTGGCAGAGGACT
CTGAGCCTTGTATTAATAAAGTCGATGCTGGGACTACTAATGCCAGTGAAGACAGTTCTA
CTACATCAGTTGTTCAGACTGATAACAAAAAAACAGATGATAAAAGATATGTGAGCAAGG
CAGACCTCAGGAAGAACTTAAGGCGAATGAGGAATGGACCAGGAAGAAATAACTGCTCAG
GTGGTAGAGTTGAAAATTCTAAAGGATTTTTGCCCAATAGCTTTGATCGTGTCCTCCTTG
ATGCTCCATGTTCTGCACTTGGCTTAAGGCCTCGCCTCTTTGCTGGTGAGGAAACGCTGG
AATCACTGAGAAATCATGCGACGTACCAGAGAAGAATGTTTGATCAAGCTGTCAAGCTAG
TTCACCCTGGTGGGGTGATTGTTTATTCCACGTGTACTATAAATCCAGGAGAAAATGAAG
CTTTGGTCAGATATGCATTGGATAAGTACAAGTTTTTGTCGCTCGGATCACAGCACCCAA
AAGTTGGAGGACCTGGTATTGTTGGTTCATTTGAGCGATCAACCAAGAAATATACTGAGG
AGTGGTTGACAAAGCATGAATCACAACTTGTCCAGAGATTCGATCCATCATCAACTCTGG
ATACAATTGGTTTCTTCATTGCAAAGTTTGATGTTGGGCAGAAAGACGACTGACGTAAGG
GGTTCTCTTGAGCATTCTATTTTGGATCCTACACTCTGAAACTTGCTGTTCCTGACTTCA
AATATCTCAGCATTAACACTTGCTGCAGTTAGATCATTTCAGGGCCCCAATCATTTTTCA
GTATGAATGGGAACCAATATCCCATATCTGGTTTCCCAGAAATTTTGTGCTCAACTGTCA
ATATTAAATTATTCTTTGTCCAAGGGATTATTGTTTGTTGTAATGAAATGCCAAGGGTGA
CTGGTTGAAAGT