Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0364900-00
CDS Infomation

cds chromosome:IRGSP-1.0:8:16892349:16896395:1 gene:Os08g0364900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Pirin-like protein. (Os08t0364900-00)
Sequence

ATGTCTGCCGCCGCCTGCATCTCCTCCTTCCCTCCACCGCCAATGGCCGCCGCGGCGGCG
CCGGCGCCGGAGACCACCATCGACGTCTTCGTCGTCGCCAACCACACGCCGGTGACCGCC
GCCGCCGACAAAAGCAGCTGCGAGGGGGACGTCGTCGCCGGCGGCGGGAGGACGGTGAGG
AGGCCGCGGGCGGTGGCGCGGACGCTGGAGTGCGAGCGGCGGGTGGTCGGCGAGGGGTTC
GCGGTGAGGAGGGGCATCGGGAGGAAGGAGCTCGACAGCCTCGATCCTTTCATCTCCCTC
GACGAGTTCGAGTTTTCTCCACCAGCCGGCTTCCATGATCATCCCCACAGAGGATTCGAG
AATGTTACCTACATGCTCGAGGGAGGCTTCAGTTACCATGACTTTTCAGGCCACAAGGGC
ACCATCAACACAGGAGATGTTCAGTGGATGACGGCGGGGCGCGGCGTGGTGCACGCGGAG
ATGCCCGGCGGCCATGGCGTCCAGAGGGGCATCAACCTCTGGATCAACCTCTCCTCCAAG
GACAAAATGGTGGAGCCGAGGTACCAGGAGCTGGCGAGCCACGACATCCCCGCCGCGGAG
CGCGACGGCGTGTCCGTCAAGGTGATCGCCGGCGAGGCCCTGGGCGCGCGCTCGCCGCTC
CAGACGCGCACCCCGGCGCTCTGCCTCGACGTCGCCATGCGGCCCGGCGCGCGCCTGCGA
GCGCCCGTCCCGCCCGGGTGGAGCGCGTGCTCGTACGTCATCGACGGCGAGGCCGTCTTC
GGGGACGAGGCCGCGGCGGCGGGCGCGCACACCTGCGTCGTGTTCGGCGGCGGCGGCGAC
GGCGTGGCCGCGCGGGCGACGGAGCGCTCCGCGGCGAGGTTCCTGCTGGTGGCGGCGCGG
CCGCACGGCGAGGCCGTGGTGAAGGACGGGCCGTTCGTGATGAACACCCGGGAGGAGGTG
GAGCAGGCCAGGGAAGACTACCGGAACCGCCGCAACGGCTTCGAGATGGCCGCCGGCTGG
AGCTCCGACCACGTTGCCACCGCCGCCGCGGCGCACTGA

Peptide Sequence

PEP ID

Os08t0364900-00
PEP Infomation

pep chromosome:IRGSP-1.0:8:16892349:16896395:1 gene:Os08g0364900 transcript:Os08t0364900-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Pirin-like protein. (Os08t0364900-00)
Sequence

MSAAACISSFPPPPMAAAAAPAPETTIDVFVVANHTPVTAAADKSSCEGDVVAGGGRTVR
RPRAVARTLECERRVVGEGFAVRRGIGRKELDSLDPFISLDEFEFSPPAGFHDHPHRGFE
NVTYMLEGGFSYHDFSGHKGTINTGDVQWMTAGRGVVHAEMPGGHGVQRGINLWINLSSK
DKMVEPRYQELASHDIPAAERDGVSVKVIAGEALGARSPLQTRTPALCLDVAMRPGARLR
APVPPGWSACSYVIDGEAVFGDEAAAAGAHTCVVFGGGGDGVAARATERSAARFLLVAAR
PHGEAVVKDGPFVMNTREEVEQAREDYRNRRNGFEMAAGWSSDHVATAAAAH

Transcript Sequence

Transcript ID

Os08t0364900-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:16892349:16896395:1 gene:Os08g0364900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Pirin-like protein. (Os08t0364900-00)
Sequence

TCCATCATCCGCACCAACACCATTAGTTATATTACCCACACATCGCCACGCATTGCCGGC
CATGTCTGCCGCCGCCTGCATCTCCTCCTTCCCTCCACCGCCAATGGCCGCCGCGGCGGC
GCCGGCGCCGGAGACCACCATCGACGTCTTCGTCGTCGCCAACCACACGCCGGTGACCGC
CGCCGCCGACAAAAGCAGCTGCGAGGGGGACGTCGTCGCCGGCGGCGGGAGGACGGTGAG
GAGGCCGCGGGCGGTGGCGCGGACGCTGGAGTGCGAGCGGCGGGTGGTCGGCGAGGGGTT
CGCGGTGAGGAGGGGCATCGGGAGGAAGGAGCTCGACAGCCTCGATCCTTTCATCTCCCT
CGACGAGTTCGAGTTTTCTCCACCAGCCGGCTTCCATGATCATCCCCACAGAGGATTCGA
GAATGTTACCTACATGCTCGAGGGAGGCTTCAGTTACCATGACTTTTCAGGCCACAAGGG
CACCATCAACACAGGAGATGTTCAGTGGATGACGGCGGGGCGCGGCGTGGTGCACGCGGA
GATGCCCGGCGGCCATGGCGTCCAGAGGGGCATCAACCTCTGGATCAACCTCTCCTCCAA
GGACAAAATGGTGGAGCCGAGGTACCAGGAGCTGGCGAGCCACGACATCCCCGCCGCGGA
GCGCGACGGCGTGTCCGTCAAGGTGATCGCCGGCGAGGCCCTGGGCGCGCGCTCGCCGCT
CCAGACGCGCACCCCGGCGCTCTGCCTCGACGTCGCCATGCGGCCCGGCGCGCGCCTGCG
AGCGCCCGTCCCGCCCGGGTGGAGCGCGTGCTCGTACGTCATCGACGGCGAGGCCGTCTT
CGGGGACGAGGCCGCGGCGGCGGGCGCGCACACCTGCGTCGTGTTCGGCGGCGGCGGCGA
CGGCGTGGCCGCGCGGGCGACGGAGCGCTCCGCGGCGAGGTTCCTGCTGGTGGCGGCGCG
GCCGCACGGCGAGGCCGTGGTGAAGGACGGGCCGTTCGTGATGAACACCCGGGAGGAGGT
GGAGCAGGCCAGGGAAGACTACCGGAACCGCCGCAACGGCTTCGAGATGGCCGCCGGCTG
GAGCTCCGACCACGTTGCCACCGCCGCCGCGGCGCACTGATGGTCACCGGCGACGGCGAG
GCCGGTGACCATGGTGTCATCAGCTCATCCAGGTCGCAGGTGAACGCTGCGTTTGCGCGG
GAGGATAGGAATTTTAGGGAATTTCGTTGCAAAGTTGATGTAAGATAAAATGGAGGATTA
GGTGTGCCGTGTGAAACTCCTGTAAAATAACCTTATGCGAATATTGAATTTCGTTCAATT
TTTGTGTTTGAAACGATGTTAAAACTTACTGATC