Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0357000-02
CDS Infomation

cds chromosome:IRGSP-1.0:8:16340418:16345157:-1 gene:Os08g0357000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BBD2 description:Similar to Wound responsive protein. (Os08t0357000-01);Similar to wound responsive protein. (Os08t0357000-02)
Sequence

ATGGCGATGGAGGGACCAATCCTGTGTCGTGCAGTGATGCAAGCTAAGCTACCTGTCACG
ATGATCAGCAACTCACTGACCAAGTCTGGGCAGCTTGGGACCGCATTCCTGGGTTGTGTG
TGTAAATACAGGAATATCACTAGACTCATTTCCCCAATCTATCAGCCGGCACAAAAGAAC
TTTGCTACTGTTTGCGGTAGCTTCAGCTCGTCGTCCGATGGTAATGGATATATGGCTGGA
AACTTTAGTGAGAGTGATGAAGATTATGTTAATTCTACTGTGCTAGAAGCAGTTGAGGTG
AGAAGTGGGGCAGAGGGATATGTAATCAAGATGCGAGATGGGAAAAACTTGAGATGTGTG
CACAATAATTCTCAAGGGAGAAATATTCCAGAAAGCGCACCACAACCTGCTATTGTTTTG
AGGATTGAAGATGGAAGTGAAACTTTACTTCCAATCATTGTTTTGGAAATGCCAAGCGTA
CTTCTGATGGCTGCTATTCGGAATGTCCACATTGCAAGACCAACCATATATCAAGTTGTG
AAGGAGATGATTGATAAGATGGGTTATGAGGTAAAACTGGTTCGGATAAATAAAAGAATT
CAAGAAGCATACTGTGCTGAACTGTTTCTGACGAAGGTAGGTGACCATACAGAAAGTATC
ACCTTTGATCTAAGACCTTCAGATGCCATAAACATTGCTGTTCGCTGCAAGGTTCCTATA
CAAGTCCATAGAAGCCTTGCATACAGTGATGGCATAAGATCAGTCGAGCCAGCAAGAATG
GCGATAGCAGCCGGCATGTCTGACGGGTTGTTGTTTACAGAACTTGACAGACCTGATGGG
CAGCCATGTGTCGAGGCTCAAGAGTTTGGATTGATCCGGAACATGCTCATTGCAGCTGTT
GAAGAGAGATACAAAGATGCTGCAACGTGGAGGGACAAACTGATGCTGCTGAGGTCTAAG
CGGAAAAACTGGGCCTGA

Peptide Sequence

PEP ID

Os08t0357000-02
PEP Infomation

pep chromosome:IRGSP-1.0:8:16340418:16345157:-1 gene:Os08g0357000 transcript:Os08t0357000-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BBD2 description:Similar to Wound responsive protein. (Os08t0357000-01);Similar to wound responsive protein. (Os08t0357000-02)
Sequence

MAMEGPILCRAVMQAKLPVTMISNSLTKSGQLGTAFLGCVCKYRNITRLISPIYQPAQKN
FATVCGSFSSSSDGNGYMAGNFSESDEDYVNSTVLEAVEVRSGAEGYVIKMRDGKNLRCV
HNNSQGRNIPESAPQPAIVLRIEDGSETLLPIIVLEMPSVLLMAAIRNVHIARPTIYQVV
KEMIDKMGYEVKLVRINKRIQEAYCAELFLTKVGDHTESITFDLRPSDAINIAVRCKVPI
QVHRSLAYSDGIRSVEPARMAIAAGMSDGLLFTELDRPDGQPCVEAQEFGLIRNMLIAAV
EERYKDAATWRDKLMLLRSKRKNWA

Transcript Sequence

Transcript ID

Os08t0357000-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:16340418:16345157:-1 gene:Os08g0357000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BBD2 description:Similar to Wound responsive protein. (Os08t0357000-01);Similar to wound responsive protein. (Os08t0357000-02)
Sequence

AAAGCCTTCAGTTCAGCCCCCACCGATCCGCACAGCCGGAGCCCGGGAGAAGTCGAGAAG
ATCATATACCCACACCTTACTCGCGCCGCGCGCGCCGCCGTCGACGGCAGCCTCCTCCTC
CTCTTCTTCCCCCGTGCCGGCGTTCGCGTTGCCTCCTCGATCGCGCCGCGCCGCGCCGCG
CGCACTCCAGGCGGGCGAGCTGGTTTGGAGAGGGGGCGAGACGACCTGACTCCGCCCTCG
ATTGGAATCGAATCCAAGATTGATGGCGATGGAGGGACCAATCCTGTGTCGTGCAGTGAT
GCAAGCTAAGCTACCTGTCACGATGATCAGCAACTCACTGACCAAGTCTGGGCAGCTTGG
GACCGCATTCCTGGGTTGTGTGTGTAAATACAGGAATATCACTAGACTCATTTCCCCAAT
CTATCAGCCGGCACAAAAGAACTTTGCTACTGTTTGCGGTAGCTTCAGCTCGTCGTCCGA
TGGTAATGGATATATGGCTGGAAACTTTAGTGAGAGTGATGAAGATTATGTTAATTCTAC
TGTGCTAGAAGCAGTTGAGGTGAGAAGTGGGGCAGAGGGATATGTAATCAAGATGCGAGA
TGGGAAAAACTTGAGATGTGTGCACAATAATTCTCAAGGGAGAAATATTCCAGAAAGCGC
ACCACAACCTGCTATTGTTTTGAGGATTGAAGATGGAAGTGAAACTTTACTTCCAATCAT
TGTTTTGGAAATGCCAAGCGTACTTCTGATGGCTGCTATTCGGAATGTCCACATTGCAAG
ACCAACCATATATCAAGTTGTGAAGGAGATGATTGATAAGATGGGTTATGAGGTAAAACT
GGTTCGGATAAATAAAAGAATTCAAGAAGCATACTGTGCTGAACTGTTTCTGACGAAGGT
AGGTGACCATACAGAAAGTATCACCTTTGATCTAAGACCTTCAGATGCCATAAACATTGC
TGTTCGCTGCAAGGTTCCTATACAAGTCCATAGAAGCCTTGCATACAGTGATGGCATAAG
ATCAGTCGAGCCAGCAAGAATGGCGATAGCAGCCGGCATGTCTGACGGGTTGTTGTTTAC
AGAACTTGACAGACCTGATGGGCAGCCATGTGTCGAGGCTCAAGAGTTTGGATTGATCCG
GAACATGCTCATTGCAGCTGTTGAAGAGAGATACAAAGATGCTGCAACGTGGAGGGACAA
ACTGATGCTGCTGAGGTCTAAGCGGAAAAACTGGGCCTGAAAGCGTGGCTCGTCTCAATG
GTGTAAATAAAGACGAAGCACTGTTGAATCCCAGAATGCATTCCAGATGACTGATACTGT
CTATGTAATTAGATGTATATATTATATGGAACTAAGAACTGGATTATGTAAATTCCGACT
GTTTCAGTCTTTCGGAGTAAAGAATAATCTGTGGAAAATCTCTGCATGTTCTTAGTTGGC
AAGCTCACCTCCATTTTCAC