Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0346500-00
CDS Infomation

cds chromosome:IRGSP-1.0:8:15712423:15716161:1 gene:Os08g0346500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transfactor-like protein. (Os08t0346500-00)
Sequence

ATGTATCAGCCAAATCCTATTTCCAGCAGTGGTCAGACTCATGGCAATCCTACTGCTCAT
GAGCAAATGGAGTTAGGGAACAATGCTATTGTCCCTAGTAACGGAGGGAACAATAACCCT
AATATGGCGGCAAGACAGCGGTTACGTTGGACAAATGAGTTGCATGACCGTTTCGTGGAG
GCTGTTACTCAGCTTGGTGGGCCTGATAGAGCCACTCCTAAGGGAGTTCTGAGAATTATG
GGTGTGCCAGGACTGACAATATACCATGTGAAAAGTCACCTACAGAAATACCGGCTTGCA
AAGTACATTCCAGACCCTTCAGCTGATGACAACAAGGATGAAGATAAAGATCCAGGGAAT
CTGCTTTCTGCACTTGAAGGTTCATCTGGAATGCAGATATCTGAAGCCCTGAAGCTGCAG
ATGGAGGTCCAGAAGCGGCTACATGAACAATTAGAGGTGCAAAGGCAGCTACAGCTGCGA
ATTGAGGCGCAGGGGAAGTATCTCCAGAAGATCATCGAAGAGCAGCAGCGTGTCATTGGT
GCAGGAGCTTCCAGAGCCACGTCAAGCGAACAATTGCCTGACTCTGAGAAAACTAACCCA
CCAACTCCAGTACCAATTTCTGAATCTCCAGTTCAGGGTGCACCCCATAGCAAGAACAGT
CAAAGCCAAGTTGAGCCGACGAAGAGCCCTTCGCATGATGATGCTCTCCCGTGTGGTGAA
CCTTTAACACCTGACTCCAGCTGCCGGCCTGGTTCACCGACGCTCAGCCCAAAGCATGAG
CGTGCAGCCAAGAGACAGAGGGGCAGTGATGCAGGCGATGTCACAGCATTCGCAGATGGA
GAATTTGTACTTCCACCAGGCATCTTTGAGTCAAGCACAGGATCCGAGTTCCAAGAATGT
TCGATGCCTTATTCAGGCCATTAG

Peptide Sequence

PEP ID

Os08t0346500-00
PEP Infomation

pep chromosome:IRGSP-1.0:8:15712423:15716161:1 gene:Os08g0346500 transcript:Os08t0346500-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transfactor-like protein. (Os08t0346500-00)
Sequence

MYQPNPISSSGQTHGNPTAHEQMELGNNAIVPSNGGNNNPNMAARQRLRWTNELHDRFVE
AVTQLGGPDRATPKGVLRIMGVPGLTIYHVKSHLQKYRLAKYIPDPSADDNKDEDKDPGN
LLSALEGSSGMQISEALKLQMEVQKRLHEQLEVQRQLQLRIEAQGKYLQKIIEEQQRVIG
AGASRATSSEQLPDSEKTNPPTPVPISESPVQGAPHSKNSQSQVEPTKSPSHDDALPCGE
PLTPDSSCRPGSPTLSPKHERAAKRQRGSDAGDVTAFADGEFVLPPGIFESSTGSEFQEC
SMPYSGH

Transcript Sequence

Transcript ID

Os08t0346500-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:15712423:15716161:1 gene:Os08g0346500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transfactor-like protein. (Os08t0346500-00)
Sequence

GCAATGTATCAGCCAAATCCTATTTCCAGCAGTGGTCAGACTCATGGCAATCCTACTGCT
CATGAGCAAATGGAGTTAGGGAACAATGCTATTGTCCCTAGTAACGGAGGGAACAATAAC
CCTAATATGGCGGCAAGACAGCGGTTACGTTGGACAAATGAGTTGCATGACCGTTTCGTG
GAGGCTGTTACTCAGCTTGGTGGGCCTGATAGAGCCACTCCTAAGGGAGTTCTGAGAATT
ATGGGTGTGCCAGGACTGACAATATACCATGTGAAAAGTCACCTACAGAAATACCGGCTT
GCAAAGTACATTCCAGACCCTTCAGCTGATGACAACAAGGATGAAGATAAAGATCCAGGG
AATCTGCTTTCTGCACTTGAAGGTTCATCTGGAATGCAGATATCTGAAGCCCTGAAGCTG
CAGATGGAGGTCCAGAAGCGGCTACATGAACAATTAGAGGTGCAAAGGCAGCTACAGCTG
CGAATTGAGGCGCAGGGGAAGTATCTCCAGAAGATCATCGAAGAGCAGCAGCGTGTCATT
GGTGCAGGAGCTTCCAGAGCCACGTCAAGCGAACAATTGCCTGACTCTGAGAAAACTAAC
CCACCAACTCCAGTACCAATTTCTGAATCTCCAGTTCAGGGTGCACCCCATAGCAAGAAC
AGTCAAAGCCAAGTTGAGCCGACGAAGAGCCCTTCGCATGATGATGCTCTCCCGTGTGGT
GAACCTTTAACACCTGACTCCAGCTGCCGGCCTGGTTCACCGACGCTCAGCCCAAAGCAT
GAGCGTGCAGCCAAGAGACAGAGGGGCAGTGATGCAGGCGATGTCACAGCATTCGCAGAT
GGAGAATTTGTACTTCCACCAGGCATCTTTGAGTCAAGCACAGGATCCGAGTTCCAAGAA
TGTTCGATGCCTTATTCAGGCCATTAGCCTATGGTGCTCTGATCATCAGTCCATCACCTT
GACAAAGCTT