Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0345700-02
CDS Infomation	cds chromosome:IRGSP-1.0:8:15658799:15663699:1 gene:Os08g0345700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:pyrophosphate-dependent phosphofrucokinase alpha-subunit, PFP alpha-subunit, pyrophosphate-fructose-6-phosphatephosphotransferase alpha subunit 3, PFP-alpha subunit 3 description:Similar to Fructose-6-phosphate 1-phosphotransferase (Fragment). (Os08t0345700-01);Similar to Fructose-6-phosphate 1-phosphotransferase (Fragment). (Os08t0345700-02)
Sequence	ATGAACGCCGACTTCGGCGCGCCCAAGGACCTCGCGGGGGGCCTCCAGCAGCGGAGGTCT CTCTACCAGCCCACCCTCCCTCCCTGCCTCCAGGGCGCAACGGTGAAGGTGGAGTATGGC GACGCCACCACCACCATCGACCCAACCTGCGCCAACGTCGTCGCGCAGGCCTTCCCCCGC ACCTACGGCCAGCCGCTTGTCAGCTTCGTCGCGCCGCCGCCCGACGCCGTCGACAAGGAC CGCGCCCCGATCAGGGTAGGGGTGGTGTTCTCCGGCAGGCAGTCGCCGGGAGGCCACAAC GTGATCTGGGGACTCCACGACGCTCTCAAGGCTTACAATCCTCATAGTGTTCTCTATGGA TTCGTCGGTGGCACTGAGGGACTGTTTGCGAACAAGACAATCGAGATCACGGATGATGTT CTTGCTTCATACAAGAACCAAGGTGGTTTTGATTTGCTCGGTAGAAGTATCGATCAGATC CGCAGCACTAAGCAAGTCAATGCTGCAATGACTACATGCAACAACCTCAACTTGGATGGC CTGGTCATCATCGGAGGAGTGACATCCAATTCAGATGCTGCACAGCTTGCAGAGGCCCTT GTCCAGAATAACTGTAAGACCAAGGTTGTCGGTGTGCCTGTTTCACTGAATGGTGATCTT AAGAACCAATTTGTTGAAACAACCGTGGGATTTGATACAGTGTGCAAGGTTAACTCTCAG CTTGTGAGCAATGTTTGCCTTGATGCAATCTCAGCTGGAAAGTACTACTATTTTGTCCGT CTGATGGGTAGAAAAGCATCTCACGTGGCCTTTGAATGTGCACTTCAATCACACCCAAAC ATGCTTATCTTAGCGGAGGAGGTAGCACTATCAAAACTCACACTGATGGAAGTTATTAAC AAGATATGTGATGGAGTACAAGCAAGGGCAGAATTAGGGAAATTCCATGGTGTGCTCCTT ATTCCAGAAGGACTAATAGAAAGCATTCCAGAAATGTATGCTCTGCTTCAGGAAATCAAT ATCCTCCACAACAACAATGTTCCTGTGGCAGAGATGCCATCACAACTGTCTCCTTGGGCA GCTGCGCTGTTCCAGTTCTTGCCACCCTTCATCAGAAGAGAGCTGCTGCTCCATCAAGAA TCAGACAACTCTGCCCAGCTGTCCCAGATTGATACTGAGCAATTGTTGGCCCACTTAGTA GAAGCAGAAATGATAAAGAGAACAAAAGAAGGAAGATACAAGGGAAGGAAGTTCAGCTCT GTATGCCATTTCTTTGGATATCAGGCTCGAGGATCCGTCCCATCAAACTTTGACTGTGAC TATGCTTATGCTCTTGGCCGTATCTCCTTGCATATGATAGCAGCTGGCTTGACTGGGTAC ATGGCAACTGTGGCTAATCTGAAGGACCCTGTAGACAAGTGGCGGTGTGCTGCTGCTCCT CTAACTGCAATGATGAGTGTGAAGAGGCATTTGCGTGGTCCTGGGGCAATCCCGATAGGA AAGCCTGCCATTCATCCTTCTCCAATTGACCTGAAAGGGAAGGCTTATGAGTTGCTGCGA GAGAAAGCATCAAGTTTTCTCCTTGATGATTTCTACAGGACTCCAGGAGGCATTCAATAT GAAGGCCCGGGTTGCAATGCAAAACCCATCACATTGACCATTGAGAACCAAGACTACATG GGCGACATTGAGATACTGAAAGACTGTCTCAGCAAGGTGAGGACGATGGTGAAGCCTGGA TGCTCGCGGGAGGTTCTGAAGGCGGCGATAAGCTCGATGCTGTCGGTGACCGACGTGCTG ACGGTGATGTCGCACCCGCTCAACGCCGAGCTGCCGCTCTACCATTTCAACTGA

Peptide Sequence

PEP ID	Os08t0345700-02
PEP Infomation	pep chromosome:IRGSP-1.0:8:15658799:15663699:1 gene:Os08g0345700 transcript:Os08t0345700-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:pyrophosphate-dependent phosphofrucokinase alpha-subunit, PFP alpha-subunit, pyrophosphate-fructose-6-phosphatephosphotransferase alpha subunit 3, PFP-alpha subunit 3 description:Similar to Fructose-6-phosphate 1-phosphotransferase (Fragment). (Os08t0345700-01);Similar to Fructose-6-phosphate 1-phosphotransferase (Fragment). (Os08t0345700-02)
Sequence	MNADFGAPKDLAGGLQQRRSLYQPTLPPCLQGATVKVEYGDATTTIDPTCANVVAQAFPR TYGQPLVSFVAPPPDAVDKDRAPIRVGVVFSGRQSPGGHNVIWGLHDALKAYNPHSVLYG FVGGTEGLFANKTIEITDDVLASYKNQGGFDLLGRSIDQIRSTKQVNAAMTTCNNLNLDG LVIIGGVTSNSDAAQLAEALVQNNCKTKVVGVPVSLNGDLKNQFVETTVGFDTVCKVNSQ LVSNVCLDAISAGKYYYFVRLMGRKASHVAFECALQSHPNMLILAEEVALSKLTLMEVIN KICDGVQARAELGKFHGVLLIPEGLIESIPEMYALLQEINILHNNNVPVAEMPSQLSPWA AALFQFLPPFIRRELLLHQESDNSAQLSQIDTEQLLAHLVEAEMIKRTKEGRYKGRKFSS VCHFFGYQARGSVPSNFDCDYAYALGRISLHMIAAGLTGYMATVANLKDPVDKWRCAAAP LTAMMSVKRHLRGPGAIPIGKPAIHPSPIDLKGKAYELLREKASSFLLDDFYRTPGGIQY EGPGCNAKPITLTIENQDYMGDIEILKDCLSKVRTMVKPGCSREVLKAAISSMLSVTDVL TVMSHPLNAELPLYHFN

Transcript Sequence

Transcript ID	Os08t0345700-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:15658799:15663699:1 gene:Os08g0345700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:pyrophosphate-dependent phosphofrucokinase alpha-subunit, PFP alpha-subunit, pyrophosphate-fructose-6-phosphatephosphotransferase alpha subunit 3, PFP-alpha subunit 3 description:Similar to Fructose-6-phosphate 1-phosphotransferase (Fragment). (Os08t0345700-01);Similar to Fructose-6-phosphate 1-phosphotransferase (Fragment). (Os08t0345700-02)
Sequence	AAGAAAGCTCACTGCGCTGCACCACCAGCCAACCCAAGATCAACAGGAACCAGAGAGAGA GAGATGAACGCCGACTTCGGCGCGCCCAAGGACCTCGCGGGGGGCCTCCAGCAGCGGAGG TCTCTCTACCAGCCCACCCTCCCTCCCTGCCTCCAGGGCGCAACGGTGAAGGTGGAGTAT GGCGACGCCACCACCACCATCGACCCAACCTGCGCCAACGTCGTCGCGCAGGCCTTCCCC CGCACCTACGGCCAGCCGCTTGTCAGCTTCGTCGCGCCGCCGCCCGACGCCGTCGACAAG GACCGCGCCCCGATCAGGGTAGGGGTGGTGTTCTCCGGCAGGCAGTCGCCGGGAGGCCAC AACGTGATCTGGGGACTCCACGACGCTCTCAAGGCTTACAATCCTCATAGTGTTCTCTAT GGATTCGTCGGTGGCACTGAGGGACTGTTTGCGAACAAGACAATCGAGATCACGGATGAT GTTCTTGCTTCATACAAGAACCAAGGTGGTTTTGATTTGCTCGGTAGAAGTATCGATCAG ATCCGCAGCACTAAGCAAGTCAATGCTGCAATGACTACATGCAACAACCTCAACTTGGAT GGCCTGGTCATCATCGGAGGAGTGACATCCAATTCAGATGCTGCACAGCTTGCAGAGGCC CTTGTCCAGAATAACTGTAAGACCAAGGTTGTCGGTGTGCCTGTTTCACTGAATGGTGAT CTTAAGAACCAATTTGTTGAAACAACCGTGGGATTTGATACAGTGTGCAAGGTTAACTCT CAGCTTGTGAGCAATGTTTGCCTTGATGCAATCTCAGCTGGAAAGTACTACTATTTTGTC CGTCTGATGGGTAGAAAAGCATCTCACGTGGCCTTTGAATGTGCACTTCAATCACACCCA AACATGCTTATCTTAGCGGAGGAGGTAGCACTATCAAAACTCACACTGATGGAAGTTATT AACAAGATATGTGATGGAGTACAAGCAAGGGCAGAATTAGGGAAATTCCATGGTGTGCTC CTTATTCCAGAAGGACTAATAGAAAGCATTCCAGAAATGTATGCTCTGCTTCAGGAAATC AATATCCTCCACAACAACAATGTTCCTGTGGCAGAGATGCCATCACAACTGTCTCCTTGG GCAGCTGCGCTGTTCCAGTTCTTGCCACCCTTCATCAGAAGAGAGCTGCTGCTCCATCAA GAATCAGACAACTCTGCCCAGCTGTCCCAGATTGATACTGAGCAATTGTTGGCCCACTTA GTAGAAGCAGAAATGATAAAGAGAACAAAAGAAGGAAGATACAAGGGAAGGAAGTTCAGC TCTGTATGCCATTTCTTTGGATATCAGGCTCGAGGATCCGTCCCATCAAACTTTGACTGT GACTATGCTTATGCTCTTGGCCGTATCTCCTTGCATATGATAGCAGCTGGCTTGACTGGG TACATGGCAACTGTGGCTAATCTGAAGGACCCTGTAGACAAGTGGCGGTGTGCTGCTGCT CCTCTAACTGCAATGATGAGTGTGAAGAGGCATTTGCGTGGTCCTGGGGCAATCCCGATA GGAAAGCCTGCCATTCATCCTTCTCCAATTGACCTGAAAGGGAAGGCTTATGAGTTGCTG CGAGAGAAAGCATCAAGTTTTCTCCTTGATGATTTCTACAGGACTCCAGGAGGCATTCAA TATGAAGGCCCGGGTTGCAATGCAAAACCCATCACATTGACCATTGAGAACCAAGACTAC ATGGGCGACATTGAGATACTGAAAGACTGTCTCAGCAAGGTGAGGACGATGGTGAAGCCT GGATGCTCGCGGGAGGTTCTGAAGGCGGCGATAAGCTCGATGCTGTCGGTGACCGACGTG CTGACGGTGATGTCGCACCCGCTCAACGCCGAGCTGCCGCTCTACCATTTCAACTGAGCG TTGTAGAGAATAAGGTCCAGTTTTGTAACACACCGGGAGAGACTGGCGTATTGGGCTACT GGTATTTGGTAGCTTCATCCACTTTCATTTTCATTTCTGTTCGTTGCTGGGAGTGAGAAC CACTGGAGTTTTCATGTCAATAAACATCGAAAACGGTAGTTGATCCTG