Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0344100-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:15554139:15559145:1 gene:Os08g0344100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:histone deacetylase 705 description:Histone deacetylase, Regulation of seed germination, Response to ABA and abiotic stresses (Os08t0344100-01)
Sequence	ATGGCGGCGTCCGGCGAGGGGGCGTCGCTGGCGTCGGCGGCGGGAGGGGAGGACGGGCGG CGGCGGCGGGTGAGCTACTTCTACGAGCCGTCGATCGGGGACTACTACTACGGGCAGGGG CACCCGATGAAGCCCCATCGCATCCGCATGGCGCACTCGCTGGTGGTCCACTACGGCCTC CACCGCCTCCTCGAGCTCTCCCGCCCCTACCCGGCCTCCGACGCCGACATCCGCCGCTTC CACTCCGACGACTACGTCGCCTTCCTCGCCTCCGCCACCGGGAACCCCGCCCTGCTCGAC GCCCGCGCCGTCAAGCGCTTCAACGTCGGCGAGGACTGCCCGGTCTTCGACGGCCTCTTC CCCTTCTGCCAGGCCTCCGCGGGGGGCAGCATCGGCGCCGCCGTCAAGCTCAACCGCGGC GACGCCGACATCACCGTCAACTGGGCGGGGGGCCTCCACCACGCCAAGAAGGGCGAGGCC TCCGGCTTCTGCTACGTCAACGACATCGTCCTCGCCATCCTCGAGCTCCTCAAGTTCCAC AGGCGTGTGCTATATGTAGACATTGATGTCCACCATGGAGATGGCGTGGAGGAAGCTTTC TTCACTACGAATCGAGTCATGACTTGTTCCTTTCACAAGTATGGGGACTTTTTCCCTGGT ACTGGGCATATCACTGATGTTGGAGCAGGCGAAGGAAAACATTATGCTTTAAATGTGCCC CTGAGTGATGGCATTGATGATGATACCTTTCGTGATCTGTTCCAGTGCATCATCAAAAAG GTAATGGAGGTTTATCAGCCAGATGTAGTTGTTCTCCAGTGTGGAGCCGACTCTTTGGCT GGAGACAGGTTAGGTTGCTTCAACCTGTCTGTGAAAGGTCATGCAGACTGCCTCCGTTAC CTTAGGTCATTCAATATTCCTATGATGGTTTTGGGAGGTGGGGGTTACACCATCAGAAAT GTTGCTCGCTGCTGGTGCTATGAGACTGCAGTTGCTGTTGGAGTTGAACCTGATAACAAG TTACCTTATAATGACTACTATGAGTACTTTGGTCCTGATTATAATCTCCATATTCAACCC AGAAGTGTGGAGAACCTGAATTCGACTAAAGACCTGGAGAACATAAAGAGCATGATATTG GATCATCTCTCAAAAATTGAGCATGTTCCGAGCACTCAGTTCCATGACAGACCATCAGAT CCTGAAGCTCCAGAGCAGGAAGAGGAGGACATGGACAAGAGACCACCTCAGCGCAGTAGG TTATGGAGTGGAGGAGCTTATGAATCTGATACAGAGGATCCTGACAACATGAAAACTGAG ACCAATGACTTATCTGCCAGCTCTGTCATGAAGGATGAATCGAATGATGATTCCTAG

Peptide Sequence

PEP ID	Os08t0344100-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:15554139:15559145:1 gene:Os08g0344100 transcript:Os08t0344100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:histone deacetylase 705 description:Histone deacetylase, Regulation of seed germination, Response to ABA and abiotic stresses (Os08t0344100-01)
Sequence	MAASGEGASLASAAGGEDGRRRRVSYFYEPSIGDYYYGQGHPMKPHRIRMAHSLVVHYGL HRLLELSRPYPASDADIRRFHSDDYVAFLASATGNPALLDARAVKRFNVGEDCPVFDGLF PFCQASAGGSIGAAVKLNRGDADITVNWAGGLHHAKKGEASGFCYVNDIVLAILELLKFH RRVLYVDIDVHHGDGVEEAFFTTNRVMTCSFHKYGDFFPGTGHITDVGAGEGKHYALNVP LSDGIDDDTFRDLFQCIIKKVMEVYQPDVVVLQCGADSLAGDRLGCFNLSVKGHADCLRY LRSFNIPMMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNDYYEYFGPDYNLHIQP RSVENLNSTKDLENIKSMILDHLSKIEHVPSTQFHDRPSDPEAPEQEEEDMDKRPPQRSR LWSGGAYESDTEDPDNMKTETNDLSASSVMKDESNDDS

Transcript Sequence

Transcript ID	Os08t0344100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:15554139:15559145:1 gene:Os08g0344100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:histone deacetylase 705 description:Histone deacetylase, Regulation of seed germination, Response to ABA and abiotic stresses (Os08t0344100-01)
Sequence	GAAGGTCCTTCCCTTCCCACAAGGGGAAAAAAGGGGAAAAAAAAAAGAAAAGAGAAGAAG AAATCCTCCGAAATGGCGGCGTCCGGCGAGGGGGCGTCGCTGGCGTCGGCGGCGGGAGGG GAGGACGGGCGGCGGCGGCGGGTGAGCTACTTCTACGAGCCGTCGATCGGGGACTACTAC TACGGGCAGGGGCACCCGATGAAGCCCCATCGCATCCGCATGGCGCACTCGCTGGTGGTC CACTACGGCCTCCACCGCCTCCTCGAGCTCTCCCGCCCCTACCCGGCCTCCGACGCCGAC ATCCGCCGCTTCCACTCCGACGACTACGTCGCCTTCCTCGCCTCCGCCACCGGGAACCCC GCCCTGCTCGACGCCCGCGCCGTCAAGCGCTTCAACGTCGGCGAGGACTGCCCGGTCTTC GACGGCCTCTTCCCCTTCTGCCAGGCCTCCGCGGGGGGCAGCATCGGCGCCGCCGTCAAG CTCAACCGCGGCGACGCCGACATCACCGTCAACTGGGCGGGGGGCCTCCACCACGCCAAG AAGGGCGAGGCCTCCGGCTTCTGCTACGTCAACGACATCGTCCTCGCCATCCTCGAGCTC CTCAAGTTCCACAGGCGTGTGCTATATGTAGACATTGATGTCCACCATGGAGATGGCGTG GAGGAAGCTTTCTTCACTACGAATCGAGTCATGACTTGTTCCTTTCACAAGTATGGGGAC TTTTTCCCTGGTACTGGGCATATCACTGATGTTGGAGCAGGCGAAGGAAAACATTATGCT TTAAATGTGCCCCTGAGTGATGGCATTGATGATGATACCTTTCGTGATCTGTTCCAGTGC ATCATCAAAAAGGTAATGGAGGTTTATCAGCCAGATGTAGTTGTTCTCCAGTGTGGAGCC GACTCTTTGGCTGGAGACAGGTTAGGTTGCTTCAACCTGTCTGTGAAAGGTCATGCAGAC TGCCTCCGTTACCTTAGGTCATTCAATATTCCTATGATGGTTTTGGGAGGTGGGGGTTAC ACCATCAGAAATGTTGCTCGCTGCTGGTGCTATGAGACTGCAGTTGCTGTTGGAGTTGAA CCTGATAACAAGTTACCTTATAATGACTACTATGAGTACTTTGGTCCTGATTATAATCTC CATATTCAACCCAGAAGTGTGGAGAACCTGAATTCGACTAAAGACCTGGAGAACATAAAG AGCATGATATTGGATCATCTCTCAAAAATTGAGCATGTTCCGAGCACTCAGTTCCATGAC AGACCATCAGATCCTGAAGCTCCAGAGCAGGAAGAGGAGGACATGGACAAGAGACCACCT CAGCGCAGTAGGTTATGGAGTGGAGGAGCTTATGAATCTGATACAGAGGATCCTGACAAC ATGAAAACTGAGACCAATGACTTATCTGCCAGCTCTGTCATGAAGGATGAATCGAATGAT GATTCCTAGAAGAGATCCTGCGATTCTGGTTCTCAGCACTCCTGATTTGTACGTGCATGC TGAAGAACAAGGAAAGTATCTGAAGATGTCTGATATCTGCGCCTGACCATTTTGCAAAAC AATGAATGCTTTTTTGGGTGCTTCTAACTTTCAAGCATGTCGGTAATTCTGGTTAGTCGG CGGCACATCCTCAAATGGTTTGTGCCAGAGGAGTGTATGCTAGAATGATTCTTGCGCTGA TATGGATTTATAGTTCTTTTATGTTCATACTTCTCCGATGTGTTGAACTCATACCGCAGA TCCGCAATCAGTTCCCCCTAGCCTGTCCAAACTTATTTTTTGTGGCATTTGAAATCCATC TGAACCGCATTGTCATTCATATTTTGATTAAAGAATGCCTGAAGGGAAAATTAGTTC