Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0342300-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:15431639:15435283:-1 gene:Os08g0342300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BRI1 LIKE 3 description:BR receptor kinase, Brassinosteroid (BR) perception in the root (Os08t0342300-01)
Sequence	ATGGCCGCCGTTCGCGTGGTGGCGCCGGCGCCTTCGGTGCTGCTGCTTGTGGCGGCGGCG GTGGTGCTGCTTCACCTGGCTCGCGCCATTGCCGGCGCGGCGGACGAGGCCGCGGCGCTG CTCGCGTTCAAGGACGCGTCCGTGGCCGCCGACCCGGGCGGCGCGCTCGCGGGCTGGGCC AACTCCACCACCCCCGGCTCGCCGTGCGCGTGGGCCGGCGTCTCGTGCGCCGCCGGCCGC GTCCGGGCGCTCGACCTCAGCGGCATGTCGCTCTCCGGCCGCCTCCGCCTCGACGCCCTC CTCGCGCTCTCGGCGCTCCGGCGCCTCGACCTCCGCGGCAACGCCTTCCACGGCGACCTC TCGCGCCACGGCTCGCCGCGGCGGGCGGCGCCGTGCGCGCTCGTGGAGGTGGACATTTCG TCGAACACCTTCAATGGGACGCTTCCCCGGGCGTTCTTGGCGTCCTGCGGCGGCCTCCAG ACCCTCAACCTGTCCAGGAACTCCCTCACCGGTGGCGGCTACCCGTTCCCACCGTCCCTG CGCAGGCTCGACATGTCGCGGAACCAGTTGTCGGATGCCGGCTTGCTGAACTACTCCCTG ACCGGCTGCCATGGCATTCAGTACCTCAACCTCTCGGCCAACCAGTTCACCGGAAGCCTC CCGGGGCTTGCACCTTGCACTGAAGTTTCTGTTCTTGATTTGTCATGGAACCTCATGTCC GGTGTACTACCTCCAAGGTTTGTGGCCATGGCTCCAGCCAATTTGACATACTTGAGCATT GCCGGTAACAACTTCTCCATGGACATCTCAGACTATGAATTTGGTGGGTGTGCAAATCTC ACATTGCTTGATTGGTCATACAACAGACTACGTAGCACAGGGTTGCCGCGGAGTCTTGTC GATTGCCGTCGATTGGAGGCACTTGACATGTCTGGGAACAAGCTTCTGTCTGGTCCAATA CCGACGTTCTTGGTTGAATTGCAAGCACTGAGGCGACTCTCACTAGCGGGCAACCGATTC ACTGGAGAAATATCGGATAAGCTGAGCATCTTGTGCAAAACGCTGGTTGAGCTAGACTTG TCAAGCAACCAGCTGATTGGCAGCTTGCCTGCAAGTTTTGGACAATGTAGGTTTCTTCAG GTGCTTGATCTTGGCAACAACCAGCTCTCTGGGGACTTCGTCGAAACTGTCATCACCAAC ATTTCTTCTCTTCGTGTGTTGCGGCTGCCGTTCAACAATATTACAGGGGCAAATCCACTG CCTGCACTTGCTTCCAGGTGCCCTCTGCTTGAAGTCATTGATCTTGGATCCAATGAGTTT GATGGCGAAATCATGCCGGATCTGTGCTCATCATTGCCGTCACTTCGGAAACTTCTCCTG CCAAACAATTACATTAATGGAACAGTGCCATCATCACTGAGCAATTGTGTCAACCTTGAG TCTATTGACCTTAGCTTCAACCTGCTGGTTGGTCAGATTCCACCAGAAATATTGTTTCTT CTGAAGCTTGTTGATTTGGTCTTATGGGCAAACAATCTCTCCGGTGAGATACCAGACAAG TTCTGCTTCAATAGCACGGCATTGGAGACATTGGTGATAAGCTACAACAGCTTCACTGGA AACATCCCTGAGTCCATTACCAGGTGTGTGAATCTCATTTGGTTATCACTTGCCGGCAAC AACCTGACTGGGAGTATTCCCTCAGGATTCGGCAACCTCCAGAATCTTGCCATTTTGCAG CTTAACAAGAATTCACTCTCTGGCAAGGTTCCAGCAGAGCTTGGCAGCTGCAGCAACCTC ATCTGGCTTGACCTCAACAGCAATGAGTTAACCGGCACAATACCGCCACAGCTAGCAGCA CAGGCGGGGCTCATCACCGGAGCAATTGTCTCTGGCAAGCAGTTTGCTTTCCTCCGTAAT GAGGCTGGCAACATCTGCCCTGGTGCTGGTGTTCTGTTTGAATTCCTAGACATTCGGCCA GACCGCCTTGCCAATTTCCCGGCTGTGCACTTGTGCTCCTCCACAAGGATATACACTGGC ACAACTGTATACACTTTCAGAAACAATGGGAGCATGATCTTCCTTGATCTTTCATATAAC AGCTTGACCGGTACAATTCCAGCGAGCTTCGGGAACATGACATATCTTGAGGTCCTTAAC TTGGGTCACAATGAACTTACCGGTGCAATTCCAGATGCATTCACTGGGCTCAAGGGGATT GGTGCACTTGATCTCTCACACAACCACCTCACCGGTGTCATCCCTCCGGGGTTTGGGTGT CTGCATTTCCTTGCAGATTTTGATGTCTCCAACAACAACCTCACTGGTGAAATCCCAACA TCAGGGCAGCTCATCACATTTCCAGCATCCCGGTATGAGAACAACTCTGGACTCTGTGGT ATTCCCTTGAATCCTTGTGTGCATAATTCAGGCGCAGGTGGTCTGCCCCAAACTTCTTAT GGGCATAGGAATTTTGCTCGACAAAGCGTGTTCCTTGCAGTGACACTCTCAGTGCTCATA CTGTTCTCCTTGCTGATTATTCATTACAAGCTATGGAAGTTCCACAAAAACAAAACAAAA GAGATACAAGCTGGTTGCTCTGAGAGCCTCCCAGGATCCAGCAAATCAAGCTGGAAGCTT TCAGGTATCGGTGAGCCATTGAGCATCAATATGGCCATATTTGAGAATCCATTGAGGAAG CTCACCTTCTCTGACCTACATCAGGCCACCAATGGCTTTTGTGCGGAGACACTCATTGGG TCAGGAGGGTTTGGTGAGGTTTACAAGGCCAAACTCAAGGATGGTAACATTGTGGCTGTC AAGAAGCTGATGCATTTCACAGGCCAGGGTGACCGGGAGTTCACCGCAGAGATGGAGACC ATTGGCAAGATCAAGCATCGCAACCTTGTTCCATTGCTAGGTTACTGCAAGATTGGTGAT GAGCGGCTCCTTGTTTACGAGTATATGAAGAATGGCAGCTTAGATTTCGTCCTACATGAC AAGGGTGAGGCTAATATGGATCTCAATTGGGCAACAAGGAAAAAGATCGCAATAGGCTCG GCCAGGGGGCTAGCATTCCTCCACCACAGCTGTGTTCCACATATCATACACCGGGACATG AAGTCCAGCAATGTGTTGCTTGATGGAAACTTTGATGCCTATGTGTCAGACTTTGGGATG GCGAGACTCATGAATGCGCTCGATTCACATCTCACTGTGAGCATGCTTTCAGGAACACCT GGATATGTGCCACCTGAGTACTGCCAGGATTTCCGGTGCACAACCAAGGGCGATGTGTAC AGCTATGGAGTTGTGCTCTTGGAGCTCCTCACAGGGAAGAAACCGATTGACCCAACTGAA TTTGGTGACAGTAATCTTGTTGGCTGGGTGAAGCAGATGGTGGAGGACAGATGCAGTGAA ATATATGATCCTACATTGATGGCCACGACATCTAGTGAATTGGAGCTCTATCAGTATCTG AAGATTGCTTGCCGCTGCTTGGATGACCAGCCTAACCGCAGGCCTACCATGATCCAGGTC ATGACAATGTTCAAAGAATTTCAGGTTGACTCGGGCAGCAATTTCCTCGATGACTTCTCA CTCAATTCAACAAACATGGAGGAATCATCTGAAAAATCAGTGTAA

Peptide Sequence

PEP ID	Os08t0342300-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:15431639:15435283:-1 gene:Os08g0342300 transcript:Os08t0342300-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BRI1 LIKE 3 description:BR receptor kinase, Brassinosteroid (BR) perception in the root (Os08t0342300-01)
Sequence	MAAVRVVAPAPSVLLLVAAAVVLLHLARAIAGAADEAAALLAFKDASVAADPGGALAGWA NSTTPGSPCAWAGVSCAAGRVRALDLSGMSLSGRLRLDALLALSALRRLDLRGNAFHGDL SRHGSPRRAAPCALVEVDISSNTFNGTLPRAFLASCGGLQTLNLSRNSLTGGGYPFPPSL RRLDMSRNQLSDAGLLNYSLTGCHGIQYLNLSANQFTGSLPGLAPCTEVSVLDLSWNLMS GVLPPRFVAMAPANLTYLSIAGNNFSMDISDYEFGGCANLTLLDWSYNRLRSTGLPRSLV DCRRLEALDMSGNKLLSGPIPTFLVELQALRRLSLAGNRFTGEISDKLSILCKTLVELDL SSNQLIGSLPASFGQCRFLQVLDLGNNQLSGDFVETVITNISSLRVLRLPFNNITGANPL PALASRCPLLEVIDLGSNEFDGEIMPDLCSSLPSLRKLLLPNNYINGTVPSSLSNCVNLE SIDLSFNLLVGQIPPEILFLLKLVDLVLWANNLSGEIPDKFCFNSTALETLVISYNSFTG NIPESITRCVNLIWLSLAGNNLTGSIPSGFGNLQNLAILQLNKNSLSGKVPAELGSCSNL IWLDLNSNELTGTIPPQLAAQAGLITGAIVSGKQFAFLRNEAGNICPGAGVLFEFLDIRP DRLANFPAVHLCSSTRIYTGTTVYTFRNNGSMIFLDLSYNSLTGTIPASFGNMTYLEVLN LGHNELTGAIPDAFTGLKGIGALDLSHNHLTGVIPPGFGCLHFLADFDVSNNNLTGEIPT SGQLITFPASRYENNSGLCGIPLNPCVHNSGAGGLPQTSYGHRNFARQSVFLAVTLSVLI LFSLLIIHYKLWKFHKNKTKEIQAGCSESLPGSSKSSWKLSGIGEPLSINMAIFENPLRK LTFSDLHQATNGFCAETLIGSGGFGEVYKAKLKDGNIVAVKKLMHFTGQGDREFTAEMET IGKIKHRNLVPLLGYCKIGDERLLVYEYMKNGSLDFVLHDKGEANMDLNWATRKKIAIGS ARGLAFLHHSCVPHIIHRDMKSSNVLLDGNFDAYVSDFGMARLMNALDSHLTVSMLSGTP GYVPPEYCQDFRCTTKGDVYSYGVVLLELLTGKKPIDPTEFGDSNLVGWVKQMVEDRCSE IYDPTLMATTSSELELYQYLKIACRCLDDQPNRRPTMIQVMTMFKEFQVDSGSNFLDDFS LNSTNMEESSEKSV

Transcript Sequence

Transcript ID	Os08t0342300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:15431639:15435283:-1 gene:Os08g0342300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BRI1 LIKE 3 description:BR receptor kinase, Brassinosteroid (BR) perception in the root (Os08t0342300-01)
Sequence	ATGGCCGCCGTTCGCGTGGTGGCGCCGGCGCCTTCGGTGCTGCTGCTTGTGGCGGCGGCG GTGGTGCTGCTTCACCTGGCTCGCGCCATTGCCGGCGCGGCGGACGAGGCCGCGGCGCTG CTCGCGTTCAAGGACGCGTCCGTGGCCGCCGACCCGGGCGGCGCGCTCGCGGGCTGGGCC AACTCCACCACCCCCGGCTCGCCGTGCGCGTGGGCCGGCGTCTCGTGCGCCGCCGGCCGC GTCCGGGCGCTCGACCTCAGCGGCATGTCGCTCTCCGGCCGCCTCCGCCTCGACGCCCTC CTCGCGCTCTCGGCGCTCCGGCGCCTCGACCTCCGCGGCAACGCCTTCCACGGCGACCTC TCGCGCCACGGCTCGCCGCGGCGGGCGGCGCCGTGCGCGCTCGTGGAGGTGGACATTTCG TCGAACACCTTCAATGGGACGCTTCCCCGGGCGTTCTTGGCGTCCTGCGGCGGCCTCCAG ACCCTCAACCTGTCCAGGAACTCCCTCACCGGTGGCGGCTACCCGTTCCCACCGTCCCTG CGCAGGCTCGACATGTCGCGGAACCAGTTGTCGGATGCCGGCTTGCTGAACTACTCCCTG ACCGGCTGCCATGGCATTCAGTACCTCAACCTCTCGGCCAACCAGTTCACCGGAAGCCTC CCGGGGCTTGCACCTTGCACTGAAGTTTCTGTTCTTGATTTGTCATGGAACCTCATGTCC GGTGTACTACCTCCAAGGTTTGTGGCCATGGCTCCAGCCAATTTGACATACTTGAGCATT GCCGGTAACAACTTCTCCATGGACATCTCAGACTATGAATTTGGTGGGTGTGCAAATCTC ACATTGCTTGATTGGTCATACAACAGACTACGTAGCACAGGGTTGCCGCGGAGTCTTGTC GATTGCCGTCGATTGGAGGCACTTGACATGTCTGGGAACAAGCTTCTGTCTGGTCCAATA CCGACGTTCTTGGTTGAATTGCAAGCACTGAGGCGACTCTCACTAGCGGGCAACCGATTC ACTGGAGAAATATCGGATAAGCTGAGCATCTTGTGCAAAACGCTGGTTGAGCTAGACTTG TCAAGCAACCAGCTGATTGGCAGCTTGCCTGCAAGTTTTGGACAATGTAGGTTTCTTCAG GTGCTTGATCTTGGCAACAACCAGCTCTCTGGGGACTTCGTCGAAACTGTCATCACCAAC ATTTCTTCTCTTCGTGTGTTGCGGCTGCCGTTCAACAATATTACAGGGGCAAATCCACTG CCTGCACTTGCTTCCAGGTGCCCTCTGCTTGAAGTCATTGATCTTGGATCCAATGAGTTT GATGGCGAAATCATGCCGGATCTGTGCTCATCATTGCCGTCACTTCGGAAACTTCTCCTG CCAAACAATTACATTAATGGAACAGTGCCATCATCACTGAGCAATTGTGTCAACCTTGAG TCTATTGACCTTAGCTTCAACCTGCTGGTTGGTCAGATTCCACCAGAAATATTGTTTCTT CTGAAGCTTGTTGATTTGGTCTTATGGGCAAACAATCTCTCCGGTGAGATACCAGACAAG TTCTGCTTCAATAGCACGGCATTGGAGACATTGGTGATAAGCTACAACAGCTTCACTGGA AACATCCCTGAGTCCATTACCAGGTGTGTGAATCTCATTTGGTTATCACTTGCCGGCAAC AACCTGACTGGGAGTATTCCCTCAGGATTCGGCAACCTCCAGAATCTTGCCATTTTGCAG CTTAACAAGAATTCACTCTCTGGCAAGGTTCCAGCAGAGCTTGGCAGCTGCAGCAACCTC ATCTGGCTTGACCTCAACAGCAATGAGTTAACCGGCACAATACCGCCACAGCTAGCAGCA CAGGCGGGGCTCATCACCGGAGCAATTGTCTCTGGCAAGCAGTTTGCTTTCCTCCGTAAT GAGGCTGGCAACATCTGCCCTGGTGCTGGTGTTCTGTTTGAATTCCTAGACATTCGGCCA GACCGCCTTGCCAATTTCCCGGCTGTGCACTTGTGCTCCTCCACAAGGATATACACTGGC ACAACTGTATACACTTTCAGAAACAATGGGAGCATGATCTTCCTTGATCTTTCATATAAC AGCTTGACCGGTACAATTCCAGCGAGCTTCGGGAACATGACATATCTTGAGGTCCTTAAC TTGGGTCACAATGAACTTACCGGTGCAATTCCAGATGCATTCACTGGGCTCAAGGGGATT GGTGCACTTGATCTCTCACACAACCACCTCACCGGTGTCATCCCTCCGGGGTTTGGGTGT CTGCATTTCCTTGCAGATTTTGATGTCTCCAACAACAACCTCACTGGTGAAATCCCAACA TCAGGGCAGCTCATCACATTTCCAGCATCCCGGTATGAGAACAACTCTGGACTCTGTGGT ATTCCCTTGAATCCTTGTGTGCATAATTCAGGCGCAGGTGGTCTGCCCCAAACTTCTTAT GGGCATAGGAATTTTGCTCGACAAAGCGTGTTCCTTGCAGTGACACTCTCAGTGCTCATA CTGTTCTCCTTGCTGATTATTCATTACAAGCTATGGAAGTTCCACAAAAACAAAACAAAA GAGATACAAGCTGGTTGCTCTGAGAGCCTCCCAGGATCCAGCAAATCAAGCTGGAAGCTT TCAGGTATCGGTGAGCCATTGAGCATCAATATGGCCATATTTGAGAATCCATTGAGGAAG CTCACCTTCTCTGACCTACATCAGGCCACCAATGGCTTTTGTGCGGAGACACTCATTGGG TCAGGAGGGTTTGGTGAGGTTTACAAGGCCAAACTCAAGGATGGTAACATTGTGGCTGTC AAGAAGCTGATGCATTTCACAGGCCAGGGTGACCGGGAGTTCACCGCAGAGATGGAGACC ATTGGCAAGATCAAGCATCGCAACCTTGTTCCATTGCTAGGTTACTGCAAGATTGGTGAT GAGCGGCTCCTTGTTTACGAGTATATGAAGAATGGCAGCTTAGATTTCGTCCTACATGAC AAGGGTGAGGCTAATATGGATCTCAATTGGGCAACAAGGAAAAAGATCGCAATAGGCTCG GCCAGGGGGCTAGCATTCCTCCACCACAGCTGTGTTCCACATATCATACACCGGGACATG AAGTCCAGCAATGTGTTGCTTGATGGAAACTTTGATGCCTATGTGTCAGACTTTGGGATG GCGAGACTCATGAATGCGCTCGATTCACATCTCACTGTGAGCATGCTTTCAGGAACACCT GGATATGTGCCACCTGAGTACTGCCAGGATTTCCGGTGCACAACCAAGGGCGATGTGTAC AGCTATGGAGTTGTGCTCTTGGAGCTCCTCACAGGGAAGAAACCGATTGACCCAACTGAA TTTGGTGACAGTAATCTTGTTGGCTGGGTGAAGCAGATGGTGGAGGACAGATGCAGTGAA ATATATGATCCTACATTGATGGCCACGACATCTAGTGAATTGGAGCTCTATCAGTATCTG AAGATTGCTTGCCGCTGCTTGGATGACCAGCCTAACCGCAGGCCTACCATGATCCAGGTC ATGACAATGTTCAAAGAATTTCAGGTTGACTCGGGCAGCAATTTCCTCGATGACTTCTCA CTCAATTCAACAAACATGGAGGAATCATCTGAAAAATCAGTGTAA