Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0341700-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:15391572:15398468:1 gene:Os08g0341700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Sec14-nodulin domain-containing protein 7, Sec14-nodulin domain protein 7 description:Similar to Phosphatidylinositol transfer-like protein II. (Os08t0341700-01);Similar to predicted protein. (Os08t0341700-02)
Sequence	ATGTCAGTTCGGCGCCGATCAGAGAGTATGGAGGGCCTGTTCTCGTTTGACGAGAGGAAA GATCGAAGGTCAGATGTGGAGAACTCGGAGGACGAGCGGAGAAGGCTATCCATTGGGTCA CTCAAGAAGAAGGCACTGAATGCATCAAACAAGCTAACACATTCACTCAAGAAGAGGGGG AAGAGAAAGGTGGAGAATCGGCCCTCATTCACAATCGAAGATGTCAGGGATGAAGAAGAG GAGCGTGCTGTCTTTTCCTTCCAGCAGGAGCTTTTTAGCAGGAACTTGCTGCCTGACAAG CATAACGATTACCACATGTTGCTGAGGTTTTTGAAGGCTAGGAAATTTGACACTGAGAAA GCCATTCAAATGTGGGCTGAGATGCTCCAGTGGAGGAAAGAATTCGGCGCAGACACAATA CTAGAGGACTTCAATTTTGAAGAGCTAGACGAGGTCCTTGTCTATTATCCTCAGGGTTAC CATGGAGTTGACAGGCAGGGAAGACCGGTATACATAGAGAGACTAGGAAAAGTTGAACCA AATAAACTGATGCACATTACTACAGTTGACCGCTATATGAAGTATCATGTACAAGAGTTT GAGAGAGCATTCCATGAAAAGTTTCCAGCATGCTCTATTGCAGCGAAAAGGCATATTGAT TCTACTACGACCATACTTGATGTCGATGGTGTGGGTCTCAAGAACTTCAGCAAAACAGCC AGGGACATGCTGGGTAGAATGCAGAAGATTGACAGTGACTATTATCCTGAGACACTGCAT CAGATGTTTGTTGTGAATGCTGGTAATGGTTTCAAACTACTCTGGAATACAGTGAAAGGC TTCCTTGATCCCAAAACTGCATCAAAGATACATGTTTTGGGAACAAAATTTCATGGAAAA CTCCTTGAAGTGATAGATGCAAGCCAACTTCCTGAATTTTTGGGTGGAGCATGCACTTGT GCTGCTGAGGGAGGATGCCTCAAGTCTAACAAAGGCCCATGGAATGATCCTAACATTATG AAGCTTGCACATAATAAGGAGGCAAAATTTACTAGACATACTCGGCGCTTGTCTGAGATT GAGCAACGAAGGGGTTCATTTGCTAGGCTACATCTTTTGAAGGGTAGAAGCAGTGACACA TCAACAGTGGAGTCGGGTTCAGATGTTGATGATCTCAGTTCTCCAATGATGAGAAGGCCA GTGGAATGTAGTCGATTAGCTCCAGTTCGTGAAGAAATGCAGATCAGAGCACGAGACTCT GCAGCTTACTACAGCTGCGATGATCACTTTGTTGTGGTAGACAAAACTGTTGACTATGGT AGAGGAGGAGCGATGCCTGATAAAACTAGTGCCCCAGAAGTAAGAGCTCAAGCTCGGCCT TTTGGAGGTAGCACAACATCATATGCAACGGGTTCCTCAAGCAACAGAGGCGGTATTTCC TCGAGCAACAGAAGCCGAACAGTCGTACCTAAAGAGAACACGGATGAAGGATTTTTCCGC CGTTTCTTCAGATTACTGCTGGCCTTGATTATAAAAGTTTTTGCCTTCTTCCACATAGCA TATGGTCAGCAGGAGATGCGGGTTGACAATCCATTGCCTCCAGCTGAGCCTGAACCAACT TCTGATGATCATCCAGCAGTGGAGACTTTCAGTGTAGACCGCATCAGTCCTGTCATCGAG CGGCTTCAGAGGCTCGAGGGTAAGGTCGATGAGCTTGGCAACAAGCCACCAGAGATTCCC TTGGAGAAAGAGCGCTCCCTCTTGGAATCTTGGGATAGGATAAAATGTATCGAATCTGAT CTCGAACGCACAAAGAAGGTGCTGCAAGCTACCGTGATGAAGCAACTGGAAATTGCAGAA TCAATAGAGGAAGTGATTAGGAGGCAGCTAAGGAGACGAAGATTTTGTGCGTAA

Peptide Sequence

PEP ID	Os08t0341700-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:15391572:15398468:1 gene:Os08g0341700 transcript:Os08t0341700-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Sec14-nodulin domain-containing protein 7, Sec14-nodulin domain protein 7 description:Similar to Phosphatidylinositol transfer-like protein II. (Os08t0341700-01);Similar to predicted protein. (Os08t0341700-02)
Sequence	MSVRRRSESMEGLFSFDERKDRRSDVENSEDERRRLSIGSLKKKALNASNKLTHSLKKRG KRKVENRPSFTIEDVRDEEEERAVFSFQQELFSRNLLPDKHNDYHMLLRFLKARKFDTEK AIQMWAEMLQWRKEFGADTILEDFNFEELDEVLVYYPQGYHGVDRQGRPVYIERLGKVEP NKLMHITTVDRYMKYHVQEFERAFHEKFPACSIAAKRHIDSTTTILDVDGVGLKNFSKTA RDMLGRMQKIDSDYYPETLHQMFVVNAGNGFKLLWNTVKGFLDPKTASKIHVLGTKFHGK LLEVIDASQLPEFLGGACTCAAEGGCLKSNKGPWNDPNIMKLAHNKEAKFTRHTRRLSEI EQRRGSFARLHLLKGRSSDTSTVESGSDVDDLSSPMMRRPVECSRLAPVREEMQIRARDS AAYYSCDDHFVVVDKTVDYGRGGAMPDKTSAPEVRAQARPFGGSTTSYATGSSSNRGGIS SSNRSRTVVPKENTDEGFFRRFFRLLLALIIKVFAFFHIAYGQQEMRVDNPLPPAEPEPT SDDHPAVETFSVDRISPVIERLQRLEGKVDELGNKPPEIPLEKERSLLESWDRIKCIESD LERTKKVLQATVMKQLEIAESIEEVIRRQLRRRRFCA

Transcript Sequence

Transcript ID	Os08t0341700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:15391572:15398468:1 gene:Os08g0341700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Sec14-nodulin domain-containing protein 7, Sec14-nodulin domain protein 7 description:Similar to Phosphatidylinositol transfer-like protein II. (Os08t0341700-01);Similar to predicted protein. (Os08t0341700-02)
Sequence	GTGGTGGCCAACAATAGACAATTGGACAACCTGTTTCCTCCTCTTCGGCTCTCCTCCTCC TCCTCTTGCCTTCTCTTCTTCTTGTTCTTGCCCAATCCTAGTAGAAGCGCCTAACTTGTC GTTTGCTGTGGCTTGGGTTTTGAGAGCCGGAGGAGGCAGGATTGATTTTTCCATGATTGG GTTTTCTTGATTGATTGGCGCCTGCTGCTGCGGTGCGGTTGGTCCAAGAACCGGGATTTC CCGGCGCGGAATCCGGTCATCCAAGAGGTGCATCTGAATAGATAAGAAGAGAACATAATC TTTGGGCATTCTCTGTGGTTGATCTCTGAAAAAGGTATCAAACAGCCTGCAAATTAGGTC TCCTGCTCTTTCCATCAAAATGTCAGTTCGGCGCCGATCAGAGAGTATGGAGGGCCTGTT CTCGTTTGACGAGAGGAAAGATCGAAGGTCAGATGTGGAGAACTCGGAGGACGAGCGGAG AAGGCTATCCATTGGGTCACTCAAGAAGAAGGCACTGAATGCATCAAACAAGCTAACACA TTCACTCAAGAAGAGGGGGAAGAGAAAGGTGGAGAATCGGCCCTCATTCACAATCGAAGA TGTCAGGGATGAAGAAGAGGAGCGTGCTGTCTTTTCCTTCCAGCAGGAGCTTTTTAGCAG GAACTTGCTGCCTGACAAGCATAACGATTACCACATGTTGCTGAGGTTTTTGAAGGCTAG GAAATTTGACACTGAGAAAGCCATTCAAATGTGGGCTGAGATGCTCCAGTGGAGGAAAGA ATTCGGCGCAGACACAATACTAGAGGACTTCAATTTTGAAGAGCTAGACGAGGTCCTTGT CTATTATCCTCAGGGTTACCATGGAGTTGACAGGCAGGGAAGACCGGTATACATAGAGAG ACTAGGAAAAGTTGAACCAAATAAACTGATGCACATTACTACAGTTGACCGCTATATGAA GTATCATGTACAAGAGTTTGAGAGAGCATTCCATGAAAAGTTTCCAGCATGCTCTATTGC AGCGAAAAGGCATATTGATTCTACTACGACCATACTTGATGTCGATGGTGTGGGTCTCAA GAACTTCAGCAAAACAGCCAGGGACATGCTGGGTAGAATGCAGAAGATTGACAGTGACTA TTATCCTGAGACACTGCATCAGATGTTTGTTGTGAATGCTGGTAATGGTTTCAAACTACT CTGGAATACAGTGAAAGGCTTCCTTGATCCCAAAACTGCATCAAAGATACATGTTTTGGG AACAAAATTTCATGGAAAACTCCTTGAAGTGATAGATGCAAGCCAACTTCCTGAATTTTT GGGTGGAGCATGCACTTGTGCTGCTGAGGGAGGATGCCTCAAGTCTAACAAAGGCCCATG GAATGATCCTAACATTATGAAGCTTGCACATAATAAGGAGGCAAAATTTACTAGACATAC TCGGCGCTTGTCTGAGATTGAGCAACGAAGGGGTTCATTTGCTAGGCTACATCTTTTGAA GGGTAGAAGCAGTGACACATCAACAGTGGAGTCGGGTTCAGATGTTGATGATCTCAGTTC TCCAATGATGAGAAGGCCAGTGGAATGTAGTCGATTAGCTCCAGTTCGTGAAGAAATGCA GATCAGAGCACGAGACTCTGCAGCTTACTACAGCTGCGATGATCACTTTGTTGTGGTAGA CAAAACTGTTGACTATGGTAGAGGAGGAGCGATGCCTGATAAAACTAGTGCCCCAGAAGT AAGAGCTCAAGCTCGGCCTTTTGGAGGTAGCACAACATCATATGCAACGGGTTCCTCAAG CAACAGAGGCGGTATTTCCTCGAGCAACAGAAGCCGAACAGTCGTACCTAAAGAGAACAC GGATGAAGGATTTTTCCGCCGTTTCTTCAGATTACTGCTGGCCTTGATTATAAAAGTTTT TGCCTTCTTCCACATAGCATATGGTCAGCAGGAGATGCGGGTTGACAATCCATTGCCTCC AGCTGAGCCTGAACCAACTTCTGATGATCATCCAGCAGTGGAGACTTTCAGTGTAGACCG CATCAGTCCTGTCATCGAGCGGCTTCAGAGGCTCGAGGGTAAGGTCGATGAGCTTGGCAA CAAGCCACCAGAGATTCCCTTGGAGAAAGAGCGCTCCCTCTTGGAATCTTGGGATAGGAT AAAATGTATCGAATCTGATCTCGAACGCACAAAGAAGGTGCTGCAAGCTACCGTGATGAA GCAACTGGAAATTGCAGAATCAATAGAGGAAGTGATTAGGAGGCAGCTAAGGAGACGAAG ATTTTGTGCGTAATAAAGAGACCTAACTCCAGAATTAACAACACATGTCATTGAGAAATA AGACTCAGGAGTACATTTGGCGGCAAAATTATGCATAGGACATGGTTGATGAGTGCAGAC ACTTGGATTCGGTGTTTGGATTGGCTCAAAGAATGGGTGGCAGGAGCCCAGAAACAGCAA AATATCAGCTCCCCTTCTGAATCTAAGAGGCTTGTCTATCCTTGATGTTAGCATAGGATG TTAGGATGGATGGCAAAAAGAAATGTAGAATAGGTAAAAATGGGAATGGATGTGAAACAT ATGTCATTGTCTGCATCTAGAAACATAAGCATCGAGTTCTCTTTGCCAAACAAATTTTCT TTATGTGATCCTGTGGTATGGCAAAATTGTAAGGGAAATTGTAAGAATTATGGAAAGTGC CTTGCATCAGGAATTGAGAGGCAAAGAGAAATGTAATCATCAAAATGATTACATTGTG