Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0338500-01
CDS Infomation

cds chromosome:IRGSP-1.0:8:15215734:15216416:-1 gene:Os08g0338500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectinesterase inhibitor domain containing protein. (Os08t0338500-01)
Sequence

ATGACGACGGCCATGGCGTCCTCCTCCTCGCGTGGCGTCACCGTCCCCTTCCTGATGATC
TTGCCGCTCCTCTTCGTAGTCGCCGCTCTTCCGGCCGAGGTCACCGTCACCGGCGACGGC
ATCCTGCTGCCGTCGTGCAAGACCGTCGGCGGCGGGAGCACCTACTTCGACGTCCAGTTC
TGCCTCGACGCCCTGGGCTCCGTCGGCGCCGGCGCCGGCGCCCGGAGCTACCGGGACCTC
GCCGCCGTCGCCGTCGGCCTCCTCACGGCCAACGCCACCAGCACGTCGGTCAAGATCGAC
GCCCTGCTCCGCGGCGGCGGAGGCGGCGGGAAGGTGGACGCCGCCACGGCGCGGTGCCTG
CGGTCGTGCCGGGCGCTGTACGCCGGCATCGCGCGGAGGCAGCCCGGCTGCGCCGCGGCG
GTGAGGGGCGGCAGGCTCGGCGAGGCGAGGTCGTCGCTGGAGGAGTCGGCGGCCGCGGCG
AGGCGGTGCGAGGACGGGTTCCGCGGGGGCAACGCGACGTCGCCGGTGACGGCGGAGGAC
GACGCCGCCTTCAAGCTCGCCAAGCTTGGCGTGGCGCTGCTTGGTTTTGCTTGA

Peptide Sequence

PEP ID

Os08t0338500-01
PEP Infomation

pep chromosome:IRGSP-1.0:8:15215734:15216416:-1 gene:Os08g0338500 transcript:Os08t0338500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectinesterase inhibitor domain containing protein. (Os08t0338500-01)
Sequence

MTTAMASSSSRGVTVPFLMILPLLFVVAALPAEVTVTGDGILLPSCKTVGGGSTYFDVQF
CLDALGSVGAGAGARSYRDLAAVAVGLLTANATSTSVKIDALLRGGGGGGKVDAATARCL
RSCRALYAGIARRQPGCAAAVRGGRLGEARSSLEESAAAARRCEDGFRGGNATSPVTAED
DAAFKLAKLGVALLGFA

Transcript Sequence

Transcript ID

Os08t0338500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:15215734:15216416:-1 gene:Os08g0338500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectinesterase inhibitor domain containing protein. (Os08t0338500-01)
Sequence

GGCAGAAACAAAATTCAGCCATGACGACGGCCATGGCGTCCTCCTCCTCGCGTGGCGTCA
CCGTCCCCTTCCTGATGATCTTGCCGCTCCTCTTCGTAGTCGCCGCTCTTCCGGCCGAGG
TCACCGTCACCGGCGACGGCATCCTGCTGCCGTCGTGCAAGACCGTCGGCGGCGGGAGCA
CCTACTTCGACGTCCAGTTCTGCCTCGACGCCCTGGGCTCCGTCGGCGCCGGCGCCGGCG
CCCGGAGCTACCGGGACCTCGCCGCCGTCGCCGTCGGCCTCCTCACGGCCAACGCCACCA
GCACGTCGGTCAAGATCGACGCCCTGCTCCGCGGCGGCGGAGGCGGCGGGAAGGTGGACG
CCGCCACGGCGCGGTGCCTGCGGTCGTGCCGGGCGCTGTACGCCGGCATCGCGCGGAGGC
AGCCCGGCTGCGCCGCGGCGGTGAGGGGCGGCAGGCTCGGCGAGGCGAGGTCGTCGCTGG
AGGAGTCGGCGGCCGCGGCGAGGCGGTGCGAGGACGGGTTCCGCGGGGGCAACGCGACGT
CGCCGGTGACGGCGGAGGACGACGCCGCCTTCAAGCTCGCCAAGCTTGGCGTGGCGCTGC
TTGGTTTTGCTTGACAAAATTACAGCTCGTGTGTACTGTTACTACTAGTGCTATGCCGTG
ATGTTCTAAATGAAATTAATAAC