Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0327200-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:14404164:14406568:-1 gene:Os08g0327200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectin lyase fold/virulence factor domain containing protein. (Os08t0327200-01)
Sequence	ATGGAGGCGCGGCTGCGGCTGCTCGTCGTCGTCGTCGTTGTTGCCGGGCACTGCGCCGCC GTCGCGTCCGCCGCCGGTAACTCGTCGGTGGTGGGGTACCACGGGGACCCGACGTTCAAC GTCAGGAACTACGGCGCTAAGGGGAACGGCCAAACCGACGACAGCAAGGCGCTGATGACG GCGTGGAAGGCGGCGTGCGCGGCGACCGGGGCGGTGACGCTGGTGCTCCCGCCGGGGACC TACTACATCGGGCCGGTGCAGTTCCATGGCCCCTGCAGCAAGGCCACCACCATGACCTTC CTCATGCAGGGGACGCTCAAGGCGGCGACCGACCTGAAGAGGTTCGGCAACGACTGGGTC GAGTTCGGGTGGGTGAACCACCTCATCGTCTCCGGCCAGAACGGCGCCGCCTTCGACGGC CAGGGCGCCGCCTCCTGGCCCTTCAACAAGTGCCCCATCCGCAAGGACTGCAAAGTCCTC CCCACCAGCGTGCTGTTCGTGAACAACAAAAACATGGTGGTGCAGAACGTGGCGTCGGTG AACAGCAAGTTCTTCCACATGGCGCTGCTGCAGTGCAGCGGGGCGAAGATCAGCGGGGTG AAGATCAGCGCGCCGGAGAGCAGCCCGAACACGGACGGCATCCACATCGAGCGGAGCAAC GGGGTGTCCATCGCGGACACCACCATCGCGACGGGCGACGACTGCATCTCCATCGGGCAG GGGAACGACAACATCGACGTGGCGCGCGTCCACTGCGGGCCGGGGCACGGCATGAGCGTG GGCAGCCTCGGCCGGTACGTCGGCGAGGGGGACGTCACGCGGATCCACGTCCGCGACATG ACCTTCCACGGCACCATGAACGGCGTCCGCATCAAGACGTGGGAGAACTCCCCCACCAAG AGCAACGCCGCCCACATGCTGTTCGAGAACCTCGTCATGAACGACGTCCAGAACCCCATC ATCATCGACCAGAAGTACTGCCCCTACTACAACTGCGAGCACAAGTTCGTGTCCGGGGTG ACGATCAAGGACGTGCAGTTCAAGAACATCAAGGGGACGGCGACGACGCAGGTGGCGGTG CTGCTCAAGTGCGGGGTGCCGTGCCAGGGCGTCGTGCTGCAGGACGTCGACCTGCGGTAC AAGGGGAACGGCGTCTCGTCGTCCAAGTGCGAGAACGTCAGGGCCAAGTACGCCGGCTTC CAGAACCCCAAGCCGTGCCCGTAG

Peptide Sequence

PEP ID	Os08t0327200-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:14404164:14406568:-1 gene:Os08g0327200 transcript:Os08t0327200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectin lyase fold/virulence factor domain containing protein. (Os08t0327200-01)
Sequence	MEARLRLLVVVVVVAGHCAAVASAAGNSSVVGYHGDPTFNVRNYGAKGNGQTDDSKALMT AWKAACAATGAVTLVLPPGTYYIGPVQFHGPCSKATTMTFLMQGTLKAATDLKRFGNDWV EFGWVNHLIVSGQNGAAFDGQGAASWPFNKCPIRKDCKVLPTSVLFVNNKNMVVQNVASV NSKFFHMALLQCSGAKISGVKISAPESSPNTDGIHIERSNGVSIADTTIATGDDCISIGQ GNDNIDVARVHCGPGHGMSVGSLGRYVGEGDVTRIHVRDMTFHGTMNGVRIKTWENSPTK SNAAHMLFENLVMNDVQNPIIIDQKYCPYYNCEHKFVSGVTIKDVQFKNIKGTATTQVAV LLKCGVPCQGVVLQDVDLRYKGNGVSSSKCENVRAKYAGFQNPKPCP

Transcript Sequence

Transcript ID	Os08t0327200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:14404164:14406568:-1 gene:Os08g0327200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectin lyase fold/virulence factor domain containing protein. (Os08t0327200-01)
Sequence	ACTCTCGTTGATCACTCCGCACCCCCCTCAACTCTCTCTATCGATCGATCGATCGATCTG TGCCTCCATCCCCGATGCCCCCATCAAGATCTCATCATCAGGATCATCTCCCTGCCGCCG CCGCCGAGTGAAATCAACTAGTGTATGCCTCTCACTGTGGCTGAGATCAAGTGACCGAGG AAGAAGACGAAGGAGACGGCGGCCGGCGGTGTAAAGCTGTATAGCTAGCTCTCTAGCTCT GCGTGTGCTCGGTCCCCGCGCCGCAGTGCTGTGCCTGTGCCTGTGCCTGTGCGCTATCTA GCTGTGGAGATGGAGGCGCGGCTGCGGCTGCTCGTCGTCGTCGTCGTTGTTGCCGGGCAC TGCGCCGCCGTCGCGTCCGCCGCCGGTAACTCGTCGGTGGTGGGGTACCACGGGGACCCG ACGTTCAACGTCAGGAACTACGGCGCTAAGGGGAACGGCCAAACCGACGACAGCAAGGCG CTGATGACGGCGTGGAAGGCGGCGTGCGCGGCGACCGGGGCGGTGACGCTGGTGCTCCCG CCGGGGACCTACTACATCGGGCCGGTGCAGTTCCATGGCCCCTGCAGCAAGGCCACCACC ATGACCTTCCTCATGCAGGGGACGCTCAAGGCGGCGACCGACCTGAAGAGGTTCGGCAAC GACTGGGTCGAGTTCGGGTGGGTGAACCACCTCATCGTCTCCGGCCAGAACGGCGCCGCC TTCGACGGCCAGGGCGCCGCCTCCTGGCCCTTCAACAAGTGCCCCATCCGCAAGGACTGC AAAGTCCTCCCCACCAGCGTGCTGTTCGTGAACAACAAAAACATGGTGGTGCAGAACGTG GCGTCGGTGAACAGCAAGTTCTTCCACATGGCGCTGCTGCAGTGCAGCGGGGCGAAGATC AGCGGGGTGAAGATCAGCGCGCCGGAGAGCAGCCCGAACACGGACGGCATCCACATCGAG CGGAGCAACGGGGTGTCCATCGCGGACACCACCATCGCGACGGGCGACGACTGCATCTCC ATCGGGCAGGGGAACGACAACATCGACGTGGCGCGCGTCCACTGCGGGCCGGGGCACGGC ATGAGCGTGGGCAGCCTCGGCCGGTACGTCGGCGAGGGGGACGTCACGCGGATCCACGTC CGCGACATGACCTTCCACGGCACCATGAACGGCGTCCGCATCAAGACGTGGGAGAACTCC CCCACCAAGAGCAACGCCGCCCACATGCTGTTCGAGAACCTCGTCATGAACGACGTCCAG AACCCCATCATCATCGACCAGAAGTACTGCCCCTACTACAACTGCGAGCACAAGTTCGTG TCCGGGGTGACGATCAAGGACGTGCAGTTCAAGAACATCAAGGGGACGGCGACGACGCAG GTGGCGGTGCTGCTCAAGTGCGGGGTGCCGTGCCAGGGCGTCGTGCTGCAGGACGTCGAC CTGCGGTACAAGGGGAACGGCGTCTCGTCGTCCAAGTGCGAGAACGTCAGGGCCAAGTAC GCCGGCTTCCAGAACCCCAAGCCGTGCCCGTAGCCCCATGACGACGATCTGTGACGAGAT CGTTAATTTTTTGCATGCTGTCTTGGCAAGCATGCACCTAGCAAGCAACAAAGACACTAG CTTAGCTAGCTCCGATTAATGTGTCGTGCACTGAGCTTAATTAATTTGTGATTCTTTTCT TTTCCCTTTATGCTACTTAGACGATTTTCTTTTCTTTTCTCCTTCATGTACGTTTCTTAG ACGATTTTGTTGCTTTGATTTTTTTTTCCCCTCTCCCTTGACGCTTAATTATAGTGGATT CTGTACGTGGTATAAGTGAGCTGCCGATTACTGGCATTAGTTTCTGAATCACTCAACTTG TGAATACCCCAATGTCATGCTTAATTAATTGGAACAAAGACTAAACTGTCTCAAAAGCCG TCTGGTTCGATCCATCATTCCATCTC