Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0326500-01
CDS Infomation

cds chromosome:IRGSP-1.0:8:14349346:14354580:1 gene:Os08g0326500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to glycosyl hydrolase family 17 protein. (Os08t0326500-01)
Sequence

ATGGCGGCGGCCAACGCCGGCGCCATGGTGCGCTTCGTGGCGGCGTTCTTGGCGGCGGTG
CTGGTGATGATGGTGCCATGCGCGCCGCGGGCGGCGGCGGCGGCGGTCGGGGTGAACTGG
GGCACCGTGTCGGCGCACCGCATGCCGGCGCCCGTCGTGGTGGAGCTCATGCGCGCCAAC
CGCATCGGCAGGGTCAAGCTCTTCGACGCCGACCAGGCCGCCCTCCGCGCGCTCATGGGC
AGCGGCCTGCAGGTCATGGTCGGGATCACCAACGAGATGCTCCAGGGCATCGCCGCCTCC
CCCGCCGCCGCCGACGCCTGGGTCGCGCGGAACGTGTCGCGCTACGTCGGCCCCGGCGGC
GCCGACATACGGTACATTGCTGTGGGAAATGAGCCATTCCTGACAAGCTATCAGGGGCAA
TTCCAGTCATATGTTCTTCCAGCAATGACCAATATTCAGCAATCATTGGTGAAAGCTAAT
CTTGCAAGGTACATCAAACTAGTTGTCCCATGCAATGCTGATGCATATCAGAGTGCATCT
GTTCCATCACAGGGAGTGTTCAGACCTGATCTGATTCAGATTATTACCCAGCTCGCTGCT
TTTCTTAGCTCAAGTGGTGCTCCTTTCGTGGTCAATATCTATCCATTCCTCAGCCTTTAC
CAGAGCTCTGATTTCCCACAAGATTATGCCTTCTTTGATGGATCTAGTCACCCAGTTGTG
GATGGCCCTAATGTGTACTACAATGCTTTCGATGGCAATTTTGACACATTAGTTTCTGCT
TTGAGCAAGATTGGCTATGGGCAGCTACCAATTGCGATTGGCGAGGTGGGTTGGCCAACT
GAAGGGGCACCAAGTGCAAACCTGACTGCAGCAAGGGCATTCACCCAAGGCCTGATCAGT
CATGTTTTAAGCAACAAAGGAACTCCTCTACGTCCTGGGGTGCCTCCGATGGATGTATAT
CTTTTCAGCCTTCTTGATGAAGAGCAGAAGAGCACATTACCTGGCAATTTCGAGCGACAC
TGGGGAGTTTTCTCATTTGATGGACAAGCCAAGTACCCTCTGAATCTTGGATTGGGCAGT
CCAGTTCTGAAAAACGCCAAAGATGTGCCATATCTTCCTCCACGGTGGTGTGTTGCGAAC
CCTGGTCGAGATCTTAACAATGTCGAGAATCACCTAAAGCTTGCTTGTACTATGGCTGAT
TGCACCACCCTCTACTATGGTGGCTCATGCAATGCTATTGGGGAGAAGGGCAACATCTCA
TATGCTTTCAACAGCTACTATCAGCTGCGGAAACAGGACGCCCAGAGCTGTGATTTCGAT
GGACTTGGCATGATCACTTACCTTGACCCATCCATCGGTGACTGCCGCTTTCTTGTTGGT
ATAGATGACAGTAGAACATCTACAATCTATTCTTCAGGTGACTGTTCTCGGAGGCGCTTT
GGATTGTGGATCTTGGCGTTCTTGGTAATTGGGTTCCTTCAGATTGGGGTTTATTTGTGA

Peptide Sequence

PEP ID

Os08t0326500-01
PEP Infomation

pep chromosome:IRGSP-1.0:8:14349346:14354580:1 gene:Os08g0326500 transcript:Os08t0326500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to glycosyl hydrolase family 17 protein. (Os08t0326500-01)
Sequence

MAAANAGAMVRFVAAFLAAVLVMMVPCAPRAAAAAVGVNWGTVSAHRMPAPVVVELMRAN
RIGRVKLFDADQAALRALMGSGLQVMVGITNEMLQGIAASPAAADAWVARNVSRYVGPGG
ADIRYIAVGNEPFLTSYQGQFQSYVLPAMTNIQQSLVKANLARYIKLVVPCNADAYQSAS
VPSQGVFRPDLIQIITQLAAFLSSSGAPFVVNIYPFLSLYQSSDFPQDYAFFDGSSHPVV
DGPNVYYNAFDGNFDTLVSALSKIGYGQLPIAIGEVGWPTEGAPSANLTAARAFTQGLIS
HVLSNKGTPLRPGVPPMDVYLFSLLDEEQKSTLPGNFERHWGVFSFDGQAKYPLNLGLGS
PVLKNAKDVPYLPPRWCVANPGRDLNNVENHLKLACTMADCTTLYYGGSCNAIGEKGNIS
YAFNSYYQLRKQDAQSCDFDGLGMITYLDPSIGDCRFLVGIDDSRTSTIYSSGDCSRRRF
GLWILAFLVIGFLQIGVYL

Transcript Sequence

Transcript ID

Os08t0326500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:14349346:14354580:1 gene:Os08g0326500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to glycosyl hydrolase family 17 protein. (Os08t0326500-01)
Sequence

ACCTTCTTTTTTTTTTCTTTTCCTTTTTTGCTCTCCATGGCTTCCACCTCCTCATCAGCC
ATCACCTCTCCCTTTGCAATTCTCTACCAAAGCGAGCATCACTACTACTAGTGCTCCTTC
CACTCTCTCCTCCTCCTTACACTGTCCCTCCATGGAGGAGGCCCCTGCAAGAAGCGCCTA
AGGATCCCTCCATTCGGGTTCACCCCACCACAATGGCGGCGGCCAACGCCGGCGCCATGG
TGCGCTTCGTGGCGGCGTTCTTGGCGGCGGTGCTGGTGATGATGGTGCCATGCGCGCCGC
GGGCGGCGGCGGCGGCGGTCGGGGTGAACTGGGGCACCGTGTCGGCGCACCGCATGCCGG
CGCCCGTCGTGGTGGAGCTCATGCGCGCCAACCGCATCGGCAGGGTCAAGCTCTTCGACG
CCGACCAGGCCGCCCTCCGCGCGCTCATGGGCAGCGGCCTGCAGGTCATGGTCGGGATCA
CCAACGAGATGCTCCAGGGCATCGCCGCCTCCCCCGCCGCCGCCGACGCCTGGGTCGCGC
GGAACGTGTCGCGCTACGTCGGCCCCGGCGGCGCCGACATACGGTACATTGCTGTGGGAA
ATGAGCCATTCCTGACAAGCTATCAGGGGCAATTCCAGTCATATGTTCTTCCAGCAATGA
CCAATATTCAGCAATCATTGGTGAAAGCTAATCTTGCAAGGTACATCAAACTAGTTGTCC
CATGCAATGCTGATGCATATCAGAGTGCATCTGTTCCATCACAGGGAGTGTTCAGACCTG
ATCTGATTCAGATTATTACCCAGCTCGCTGCTTTTCTTAGCTCAAGTGGTGCTCCTTTCG
TGGTCAATATCTATCCATTCCTCAGCCTTTACCAGAGCTCTGATTTCCCACAAGATTATG
CCTTCTTTGATGGATCTAGTCACCCAGTTGTGGATGGCCCTAATGTGTACTACAATGCTT
TCGATGGCAATTTTGACACATTAGTTTCTGCTTTGAGCAAGATTGGCTATGGGCAGCTAC
CAATTGCGATTGGCGAGGTGGGTTGGCCAACTGAAGGGGCACCAAGTGCAAACCTGACTG
CAGCAAGGGCATTCACCCAAGGCCTGATCAGTCATGTTTTAAGCAACAAAGGAACTCCTC
TACGTCCTGGGGTGCCTCCGATGGATGTATATCTTTTCAGCCTTCTTGATGAAGAGCAGA
AGAGCACATTACCTGGCAATTTCGAGCGACACTGGGGAGTTTTCTCATTTGATGGACAAG
CCAAGTACCCTCTGAATCTTGGATTGGGCAGTCCAGTTCTGAAAAACGCCAAAGATGTGC
CATATCTTCCTCCACGGTGGTGTGTTGCGAACCCTGGTCGAGATCTTAACAATGTCGAGA
ATCACCTAAAGCTTGCTTGTACTATGGCTGATTGCACCACCCTCTACTATGGTGGCTCAT
GCAATGCTATTGGGGAGAAGGGCAACATCTCATATGCTTTCAACAGCTACTATCAGCTGC
GGAAACAGGACGCCCAGAGCTGTGATTTCGATGGACTTGGCATGATCACTTACCTTGACC
CATCCATCGGTGACTGCCGCTTTCTTGTTGGTATAGATGACAGTAGAACATCTACAATCT
ATTCTTCAGGTGACTGTTCTCGGAGGCGCTTTGGATTGTGGATCTTGGCGTTCTTGGTAA
TTGGGTTCCTTCAGATTGGGGTTTATTTGTGATTTTGGTTGTCGAGAGTCGACTTTAAAC
AGCTCCCTTGGGCACACTTCCCATGTCCTTGTGAAGTAGCTTCGTCAATTGGTGGCTTCT
AGATGTAGGAAAGGGGGGACACTGTTAGATGTACATGATCACTAGCTTGTTCTTGGGATT
GTGCTGTCCAATTCTGCAACTTCCGATCTTCATGCTAAGGTGGCCAAAAGCTTTCTCTAG
ATTGAAATGAAGATGGTAGATGTTGTTGCAACCTGATTCTGCCATTCTTTGGTACCACCA
TTTTGATTTGGGGCGAATATATTTCTTTTGTAGGGGGTATATGAGGCTATGGTATTGCTG
TGGTCTTAAAGATACCTCATGAAACCGCTGAAATTCATACTGGTGGAATCACGAGAAATT
GTTTTGTTTG