Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0323700-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:14186171:14195420:-1 gene:Os08g0323700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:cation-Cl- cotransporter 1, cation-chloride cotransporter 1, cation-chloride co-transporter description:Cation-chloride cotransporter, Regulation of ion (Cl-, K+ and Na+) homeostasis, Cell elongation, Osmoregulation (Os08t0323700-01)
Sequence	ATGGAGAACGGGGAGATCGAGGGGGCAGCGGACGACGGGGTGCCGGTGCCCGCGCCGCCC AACGGCAGGAGGTATCGCCCCGTCGGCTCCAGCGATCGCGCCGTCATCCAGATGACCTCC ATGGAGCCCGGCTCCTCCTCCTCTACCGCTGTGGCAGCCGTCAGTGGCATCACGCCCCAG CCACCAAGGAATCTAACGGTGGATCCAAGCATGCAAGAAGATCACACTGTTTCACAAGGG GATTCAAAGCTTGAGCTTTTTGGTTTTGACTCTCTTGTAAATATTTTGGGCCTCAAGAGC ATGACAGGAGAACAGATTCAGGCCCCTTCCAGTCCTAGGGACGGTGAGGATGTTGCAATT ACGATTGGACGCCCAAAGGAAACTGGACCCAAGTTTGGTACCATGATGGGTGTCTTTGTC CCATGCTTGCAGAATATATTGGGAATCATTTATTATATCCGTTTTACATGGATTGTAGGT ATGGCAGGTGTATGGCAGTCGCTTGTTTTAGTCTCGTTCTGTGGTGCATGCACATTTTTA ACTGGAATATCATTAAGTGCCATTGCAACGAATGGAGCAATGAAGGGTGGTGGGCCATAC TATCTCATTGGGCGTGCGCTTGGTCCTGAAGTTGGAGTTAGCATTGGACTATGCTTCTTC CTTGGAAATGCAGTTGCTGGATCCATGTATGTGCTAGGAGCTGTAGAAACCTTTTTGGAT GCAGTTCCTTCTGCTGGTTTTTTTAAAGAGAGTGTCACAGTAGTCAATAATACATTAGTA AATGGCACTGCAACAGCTAGCACAGCAACTATATCAACACCCAGCTTGCATGACCTTCAA GTATATGGTGTTATTGTAACCATACTGCTGTGCTTTATTGTGTTTGGCGGTGTCAAAATC ATCAACAAGGTTGCACCTGCCTTCTTAATACCAGTCCTCTTTTCACTGTTGTGCATTTAT CTTGGTGTTTTCATTGCACCAAGGCACAATGCTCCAAAGGGAATTACTGGGTTGAGTATA ACCACATTTAAGGACAACTGGGGCTCAGAATATCAACGCACAAACAATGCTGGAGTTCCT GATCCAAATGGCTCCATATATTGGGATTTCAATGCTTTGGTAGGCCTCTTTTTCCCAGCA GTGACTGGAATTATGGCTGGTTCGAACCGATCGGCTTCACTGAAGGACACACAACGTTCA ATACCAATTGGAACATTATCTGCAACTCTTACAACAACTGCCATGTACCTGTTCTCTGTC CTTCTATTTGGAGCCTTGGCCACAAGAGAAGAGCTTCTAACTGATAGGCTTCTTACTGCT ACAGTGGCATGGCCTGCTCCAGCAGTGATTTATATTGGTATTATTTTGTCTACTTTAGGC GCAGCACTGCAGAGTTTGACAGGGGCTCCAAGATTACTGGCAGCAATAGCAAATGATGAC ATTCTTCCAGTTCTTAATTACTTCAAGGTTTCTGAAGGGGCTGAGCCTCACTCAGCCACT TTATTCACAGCTTTCATTTGTATCTGCTGTGTGGTTATTGGCAACTTGGATTTGATTACG CCCACCATCACAATGTTTTTCCTTCTGTGCTATGCTGGTGTGAACCTGTCATGCTTTCTC CTTGACCTCCTTGATGCTCCTAGTTGGCGTCCTCGTTGGAAATTTCACCATTGGAGTTTA TCACTTGTTGGTGCATTGCTTTGTGTTGTGATCATGTTTTTGATATCCTGGTCTTTTACT GTTGTCTCCCTTGCCCTTGCAAGCCTCATCTATTACTATGTGAGCTTAAAAGGTAAGGCT GGAGACTGGGGAGATGGATTTAAGAGTGCATACTTTCAATTGGCACTACGAAGTCTCAGA TCATTAGGAGCAAACCAAGTGCATCCTAAGAATTGGTACCCCATTCCTCTGATATTCTGC CGTCCTTGGGGTAAACTTCCAGAAAATGTACCTTGTCATCCAAAGCTTGCAGATTTTGCC AACTGTATGAAGAAGAAGGGGCGTGGTATGTCAATTTTCGTCTCGATTATTGACGGTGAT TATCATGAACTGGCCGAGGATGCAAAGACTGCTTGTCGTCAGCTGGACACTTACATTGAG TACAAACGCTGTGAGGGTGTTGCAGAGATTATTGTAGCGCCATCAATGTCTGAGGGCTTC CGCAGCATTGTTCAGACCATGGGTCTAGGTAACTTGAAGCCCAACATTATTGTGATGCGG TACCCTGAGATTTGGCGTCGCGAGAATCTGATACAGATACCGTCAACATTTGTTAGCATA ATAAATGATTGCATTATTGCTAACAAAGCCGTTGTCATTGTGAAGGGCCTTGATGAGTGG CCTAATGAGTACCAGAGACAGTACGGCACTATTGACCTCTACTGGATTGTGAGAGATGGA GGATTGATGCTTCTTCTGTCTCAGCTCCTGCTCACAAAAGAGACCTTTGAAAGCTGCAAA ATCCAAGTGTTCTGCATAGCAGAGGAGGATACTGATGCTGAGGAGCTGAAGGCTGACGTC AAAAAGTTCTTGTATGATCTTCGAATGCATGCTGAGGTCATCGTCGTGACTATGAAGTCA TGGGAACCTCATATGGAGAGCAGTAGCAGTGGTGCTCCACAGGACGATTCTCAAGAGGCT TACACAAGTGCACAGCGAAGGATCAGCACATACCTCTCTGAGATGAAGGAAACTGCACAA AGAGAAGGACATCCACTAATGGAGGACGGAAAGCAAGTAGTTGTGAATGAACAGAAGATT GAGAAATTCCTCTATACAATGTTCAAGCTGAACTCGACAATACTTAGGTACTCCAGAATG GCAGCTGTGGTCCTCGTAAGCCTCCCTCCACCACCATTAAATCACCCTGCGTATTTCTAC ATGGAGTACATGGATCTGCTTGTAGAGAACGTCCCACGCATGTTGATAGTTAGGGGATAC AGAAGAGATGTTGTCACATTCTTCACATGA

Peptide Sequence

PEP ID	Os08t0323700-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:14186171:14195420:-1 gene:Os08g0323700 transcript:Os08t0323700-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:cation-Cl- cotransporter 1, cation-chloride cotransporter 1, cation-chloride co-transporter description:Cation-chloride cotransporter, Regulation of ion (Cl-, K+ and Na+) homeostasis, Cell elongation, Osmoregulation (Os08t0323700-01)
Sequence	MENGEIEGAADDGVPVPAPPNGRRYRPVGSSDRAVIQMTSMEPGSSSSTAVAAVSGITPQ PPRNLTVDPSMQEDHTVSQGDSKLELFGFDSLVNILGLKSMTGEQIQAPSSPRDGEDVAI TIGRPKETGPKFGTMMGVFVPCLQNILGIIYYIRFTWIVGMAGVWQSLVLVSFCGACTFL TGISLSAIATNGAMKGGGPYYLIGRALGPEVGVSIGLCFFLGNAVAGSMYVLGAVETFLD AVPSAGFFKESVTVVNNTLVNGTATASTATISTPSLHDLQVYGVIVTILLCFIVFGGVKI INKVAPAFLIPVLFSLLCIYLGVFIAPRHNAPKGITGLSITTFKDNWGSEYQRTNNAGVP DPNGSIYWDFNALVGLFFPAVTGIMAGSNRSASLKDTQRSIPIGTLSATLTTTAMYLFSV LLFGALATREELLTDRLLTATVAWPAPAVIYIGIILSTLGAALQSLTGAPRLLAAIANDD ILPVLNYFKVSEGAEPHSATLFTAFICICCVVIGNLDLITPTITMFFLLCYAGVNLSCFL LDLLDAPSWRPRWKFHHWSLSLVGALLCVVIMFLISWSFTVVSLALASLIYYYVSLKGKA GDWGDGFKSAYFQLALRSLRSLGANQVHPKNWYPIPLIFCRPWGKLPENVPCHPKLADFA NCMKKKGRGMSIFVSIIDGDYHELAEDAKTACRQLDTYIEYKRCEGVAEIIVAPSMSEGF RSIVQTMGLGNLKPNIIVMRYPEIWRRENLIQIPSTFVSIINDCIIANKAVVIVKGLDEW PNEYQRQYGTIDLYWIVRDGGLMLLLSQLLLTKETFESCKIQVFCIAEEDTDAEELKADV KKFLYDLRMHAEVIVVTMKSWEPHMESSSSGAPQDDSQEAYTSAQRRISTYLSEMKETAQ REGHPLMEDGKQVVVNEQKIEKFLYTMFKLNSTILRYSRMAAVVLVSLPPPPLNHPAYFY MEYMDLLVENVPRMLIVRGYRRDVVTFFT

Transcript Sequence

Transcript ID	Os08t0323700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:14186171:14195420:-1 gene:Os08g0323700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:cation-Cl- cotransporter 1, cation-chloride cotransporter 1, cation-chloride co-transporter description:Cation-chloride cotransporter, Regulation of ion (Cl-, K+ and Na+) homeostasis, Cell elongation, Osmoregulation (Os08t0323700-01)
Sequence	CAGGCGCGCGCGCCGCCGCCTCCTCTCGCGCGGGCGCTGTACCGCCCCAGCCGTCGACAC GGGCGCGGCGCTCCGGAGCCTGCAGCCGTCGTCGCGCCGCCAGGCGCCTCCAACCGTCCG CCGGCCGGCGCTAGCGCCCTCCGTCGCCAGCACGCCGTCCGCCGCCACCGATTCCCCTGC CGGCTGCCGACTACAGACCATGGCTTCGTTCTCCTCCCCGGTAAGCTCCGACAGCGACGA CGCAAGTTGCTAGAGTGAGGGATGGAGAACGGGGAGATCGAGGGGGCAGCGGACGACGGG GTGCCGGTGCCCGCGCCGCCCAACGGCAGGAGGTATCGCCCCGTCGGCTCCAGCGATCGC GCCGTCATCCAGATGACCTCCATGGAGCCCGGCTCCTCCTCCTCTACCGCTGTGGCAGCC GTCAGTGGCATCACGCCCCAGCCACCAAGGAATCTAACGGTGGATCCAAGCATGCAAGAA GATCACACTGTTTCACAAGGGGATTCAAAGCTTGAGCTTTTTGGTTTTGACTCTCTTGTA AATATTTTGGGCCTCAAGAGCATGACAGGAGAACAGATTCAGGCCCCTTCCAGTCCTAGG GACGGTGAGGATGTTGCAATTACGATTGGACGCCCAAAGGAAACTGGACCCAAGTTTGGT ACCATGATGGGTGTCTTTGTCCCATGCTTGCAGAATATATTGGGAATCATTTATTATATC CGTTTTACATGGATTGTAGGTATGGCAGGTGTATGGCAGTCGCTTGTTTTAGTCTCGTTC TGTGGTGCATGCACATTTTTAACTGGAATATCATTAAGTGCCATTGCAACGAATGGAGCA ATGAAGGGTGGTGGGCCATACTATCTCATTGGGCGTGCGCTTGGTCCTGAAGTTGGAGTT AGCATTGGACTATGCTTCTTCCTTGGAAATGCAGTTGCTGGATCCATGTATGTGCTAGGA GCTGTAGAAACCTTTTTGGATGCAGTTCCTTCTGCTGGTTTTTTTAAAGAGAGTGTCACA GTAGTCAATAATACATTAGTAAATGGCACTGCAACAGCTAGCACAGCAACTATATCAACA CCCAGCTTGCATGACCTTCAAGTATATGGTGTTATTGTAACCATACTGCTGTGCTTTATT GTGTTTGGCGGTGTCAAAATCATCAACAAGGTTGCACCTGCCTTCTTAATACCAGTCCTC TTTTCACTGTTGTGCATTTATCTTGGTGTTTTCATTGCACCAAGGCACAATGCTCCAAAG GGAATTACTGGGTTGAGTATAACCACATTTAAGGACAACTGGGGCTCAGAATATCAACGC ACAAACAATGCTGGAGTTCCTGATCCAAATGGCTCCATATATTGGGATTTCAATGCTTTG GTAGGCCTCTTTTTCCCAGCAGTGACTGGAATTATGGCTGGTTCGAACCGATCGGCTTCA CTGAAGGACACACAACGTTCAATACCAATTGGAACATTATCTGCAACTCTTACAACAACT GCCATGTACCTGTTCTCTGTCCTTCTATTTGGAGCCTTGGCCACAAGAGAAGAGCTTCTA ACTGATAGGCTTCTTACTGCTACAGTGGCATGGCCTGCTCCAGCAGTGATTTATATTGGT ATTATTTTGTCTACTTTAGGCGCAGCACTGCAGAGTTTGACAGGGGCTCCAAGATTACTG GCAGCAATAGCAAATGATGACATTCTTCCAGTTCTTAATTACTTCAAGGTTTCTGAAGGG GCTGAGCCTCACTCAGCCACTTTATTCACAGCTTTCATTTGTATCTGCTGTGTGGTTATT GGCAACTTGGATTTGATTACGCCCACCATCACAATGTTTTTCCTTCTGTGCTATGCTGGT GTGAACCTGTCATGCTTTCTCCTTGACCTCCTTGATGCTCCTAGTTGGCGTCCTCGTTGG AAATTTCACCATTGGAGTTTATCACTTGTTGGTGCATTGCTTTGTGTTGTGATCATGTTT TTGATATCCTGGTCTTTTACTGTTGTCTCCCTTGCCCTTGCAAGCCTCATCTATTACTAT GTGAGCTTAAAAGGTAAGGCTGGAGACTGGGGAGATGGATTTAAGAGTGCATACTTTCAA TTGGCACTACGAAGTCTCAGATCATTAGGAGCAAACCAAGTGCATCCTAAGAATTGGTAC CCCATTCCTCTGATATTCTGCCGTCCTTGGGGTAAACTTCCAGAAAATGTACCTTGTCAT CCAAAGCTTGCAGATTTTGCCAACTGTATGAAGAAGAAGGGGCGTGGTATGTCAATTTTC GTCTCGATTATTGACGGTGATTATCATGAACTGGCCGAGGATGCAAAGACTGCTTGTCGT CAGCTGGACACTTACATTGAGTACAAACGCTGTGAGGGTGTTGCAGAGATTATTGTAGCG CCATCAATGTCTGAGGGCTTCCGCAGCATTGTTCAGACCATGGGTCTAGGTAACTTGAAG CCCAACATTATTGTGATGCGGTACCCTGAGATTTGGCGTCGCGAGAATCTGATACAGATA CCGTCAACATTTGTTAGCATAATAAATGATTGCATTATTGCTAACAAAGCCGTTGTCATT GTGAAGGGCCTTGATGAGTGGCCTAATGAGTACCAGAGACAGTACGGCACTATTGACCTC TACTGGATTGTGAGAGATGGAGGATTGATGCTTCTTCTGTCTCAGCTCCTGCTCACAAAA GAGACCTTTGAAAGCTGCAAAATCCAAGTGTTCTGCATAGCAGAGGAGGATACTGATGCT GAGGAGCTGAAGGCTGACGTCAAAAAGTTCTTGTATGATCTTCGAATGCATGCTGAGGTC ATCGTCGTGACTATGAAGTCATGGGAACCTCATATGGAGAGCAGTAGCAGTGGTGCTCCA CAGGACGATTCTCAAGAGGCTTACACAAGTGCACAGCGAAGGATCAGCACATACCTCTCT GAGATGAAGGAAACTGCACAAAGAGAAGGACATCCACTAATGGAGGACGGAAAGCAAGTA GTTGTGAATGAACAGAAGATTGAGAAATTCCTCTATACAATGTTCAAGCTGAACTCGACA ATACTTAGGTACTCCAGAATGGCAGCTGTGGTCCTCGTAAGCCTCCCTCCACCACCATTA AATCACCCTGCGTATTTCTACATGGAGTACATGGATCTGCTTGTAGAGAACGTCCCACGC ATGTTGATAGTTAGGGGATACAGAAGAGATGTTGTCACATTCTTCACATGATTAGAGATG TATACCTTCTGGCGGCTCTACTGCCATATGATTGTTGTAACATCATCATAGCAAAGTGGG CAAGCAGATTTTGTGCAGATTTTACAGCTGAAAGTCAGAAGCCATCACCTTGAAGGCTAC CTACCCTGAGATAGGAGATCTGCTGGGCCTTTCGCTGGCATATTGGGTACGTCAACTACA GTATGTCCATTCTTTTTCTCGGATTCACATAGCAAGCTTCAATACAGTTAATTGTCACAA ATTTTGTAGCCCTGGTGTTCCCCATACGTGTAACAATCTTAGAAACGCAACGCTTCCTTT TGCACTGAAACAGTAGCAATGGTATCACATTTTTTAAAATATATTTCCAGTTGATGTAAT GAGCAAACTGAGGTGGCCATTAATGTTGGCATGTTGTTGATTGGCATGACGTTTATACTG ATACACGTGAAAATCAGCTGAAATTATTGGT