Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0322500-00
CDS Infomation	cds chromosome:IRGSP-1.0:8:14056207:14058411:1 gene:Os08g0322500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os08t0322500-00)
Sequence	ATGATTCATGGGCAAAGCGATAAGGAAGTTCTTGTTCAGCTCAAGAACTTCCTGCAGGTG CAAAACCCGATAAACCACGGCGCTTACGTCAGCTGGTCGGAGTCAGAGGCCTCGCCGTGC CATTGGAAAGGTGTTGGGTGTGATGATGCCGGGCATGTGAATTCCCTCGATCTTTCGAAC TCAAACATCGCAGGTCCATTATTCAGAAACTTCTCACGCATCATGCGGCTTACCCACCTA AACCTTTCATCAAACAGCATCACTGGTGAACTCCAGGATGATCTCAAACAATGCCAGAGT CTCCAGCACCTCAACATATCCAACAACCTCATTGGTGGCATCCTTGATTTGTCCAGCCTG ACCAACCTTCAGACACTAGACGTATCCCAAAATCGGTTTCAGGGAAGGATAGACAGAAAC TTCCCGGGAATATGCGGCAACCTCACTTTCCTCAGTGTCTCCAGCAACAGCTTCACAGGC AGGATAGATAAACTATTTGACGGCTGCCCAAAGCTCAAGCATGTTGATCTCAGCTGGAAC GGCTTCACCGGCATGGTCTGGCCAGGCATTGAAAGGCTTAGACAGTTCAAGGCCAACAAC AACAACCTCACAGGGAGAATTTCTCCTGGCATGTTCACAGAAGGGTGCAAATTGCGCTCA CTGAACATTGCTATCAACTCATTGCACGGTAGCTTTCCAAGCTCCATTGGCAATTGCTCT AACATGAAATTCCTTTCACTATGGGAAAACAGCTTTTATGGATCTATACCACCAGGAATT GGTTCGATTGCACGGCTTGAGGAGCTGGTCCTTGCAAGCAACAGCTTTGATGGAATTATT CCAATGGAGCTGACAAACTGTACCAACCTGAAATATTTGGACATCAGTGACAACAATTTT GGTGGAGAGGTGCAGGATGTCTTTGGGAAACTAACATGCATGAGGAGTCTGTTACTCCAA GAGAACAACTATACTGGTGGCATTACCTCATCCGGGATTCTCCAGTTGCCGAATCTAATT GTGCTTGACCTATGCTACAACCAATTCTCCGGTGATTTACCCAGTGAAATCAGCAGCATG AAGAATCTCAAGGTTCTCATGCTTGCTGAAAACAACTTCTCTGGTAAAATACCACCAACA TATGGTCAGCTTCTCAGGCTCCAAGTATTGGACTTGTCCTTCAACAGTCTTTCTGGTGAG ATTCCACCAGACATTGGTAACCTATCATCACTTCTCCTTTTGATACTTGCTGGGAACCAA ATTTCAGGTGAGATCCCAAGGGAGATAGGAAATTGTACCAGCTTAGTTTGGCTTAACCTT GCTGGAAACCAGCTAATGGGGCAAATCCCACCAGAGATGGCAAATATAGGGAGCAATCCA AGCCCAACATTCATGGAGAATCGAAAGAACCCAGAACTTTTGGAATCTATCACCAGCAAA TGTGTCGCTGTAGAGTGGCTTCCATCAAGTTATCCAGAATTCAACTTTGTTCAGTCCCTG ATGATGTCTCAGAAGAACTGCCAAACCATATGGAATCGACTCGCCATGGGGTATGACGTA CTTCCAATATCTTCACCACTGCGAACAGCATTAGGATATGTTCAGTTGTCAGGAAATCTG CTGTCTGGAGAGATACCATCTGCTATTGGTACAATGAAGAACTTCAGTTTGCTCCTTCTT GATGGAAACCGACTCTCTGGACACCTACCAGCAGAGATTGGTCATCTTCAACTTGTTGCT TTGAATATCTCAAGCAATTTTATTTCTGGTGAAATTCCCTCTGAGATTGGTCATATGGTA ACACTTGAAAGCCTTGATCTGTCAAGTAATAACTTCTCTGGTGCACTCCCATCAAACCTT AACCAACTCACTAAACTGAGTAGGTTCAATTTGTCATACAATCCGCTTCTCTCAGGGAAT GTTCCAAGCAGTGGGCAGCTCTCCACCTTTGATGAGCAATCTTTTCTGGGAGATCCACTG TTGTCTTTGAATGTAACAGCAGGTTCCAGTTCTGATTCTAGTCCAAGGGAGTTCTCATCA TCTGACACAGAGGAGCATCCTACAAACGAAGAGATCATGGTGACAACAATTGCATTCCTT GCATTCTTTTCAGTCACATTGCTTACCAGAGAATTTCATATCTTCATGTACTTGTACTTC ACAGCATCACGGAAAATTGCCAACTGTAGGATTATTTGCACCTGA

Peptide Sequence

PEP ID	Os08t0322500-00
PEP Infomation	pep chromosome:IRGSP-1.0:8:14056207:14058411:1 gene:Os08g0322500 transcript:Os08t0322500-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os08t0322500-00)
Sequence	MIHGQSDKEVLVQLKNFLQVQNPINHGAYVSWSESEASPCHWKGVGCDDAGHVNSLDLSN SNIAGPLFRNFSRIMRLTHLNLSSNSITGELQDDLKQCQSLQHLNISNNLIGGILDLSSL TNLQTLDVSQNRFQGRIDRNFPGICGNLTFLSVSSNSFTGRIDKLFDGCPKLKHVDLSWN GFTGMVWPGIERLRQFKANNNNLTGRISPGMFTEGCKLRSLNIAINSLHGSFPSSIGNCS NMKFLSLWENSFYGSIPPGIGSIARLEELVLASNSFDGIIPMELTNCTNLKYLDISDNNF GGEVQDVFGKLTCMRSLLLQENNYTGGITSSGILQLPNLIVLDLCYNQFSGDLPSEISSM KNLKVLMLAENNFSGKIPPTYGQLLRLQVLDLSFNSLSGEIPPDIGNLSSLLLLILAGNQ ISGEIPREIGNCTSLVWLNLAGNQLMGQIPPEMANIGSNPSPTFMENRKNPELLESITSK CVAVEWLPSSYPEFNFVQSLMMSQKNCQTIWNRLAMGYDVLPISSPLRTALGYVQLSGNL LSGEIPSAIGTMKNFSLLLLDGNRLSGHLPAEIGHLQLVALNISSNFISGEIPSEIGHMV TLESLDLSSNNFSGALPSNLNQLTKLSRFNLSYNPLLSGNVPSSGQLSTFDEQSFLGDPL LSLNVTAGSSSDSSPREFSSSDTEEHPTNEEIMVTTIAFLAFFSVTLLTREFHIFMYLYF TASRKIANCRIICT

Transcript Sequence

Transcript ID	Os08t0322500-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:14056207:14058411:1 gene:Os08g0322500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os08t0322500-00)
Sequence	ATGATTCATGGGCAAAGCGATAAGGAAGTTCTTGTTCAGCTCAAGAACTTCCTGCAGGTG CAAAACCCGATAAACCACGGCGCTTACGTCAGCTGGTCGGAGTCAGAGGCCTCGCCGTGC CATTGGAAAGGTGTTGGGTGTGATGATGCCGGGCATGTGAATTCCCTCGATCTTTCGAAC TCAAACATCGCAGGTCCATTATTCAGAAACTTCTCACGCATCATGCGGCTTACCCACCTA AACCTTTCATCAAACAGCATCACTGGTGAACTCCAGGATGATCTCAAACAATGCCAGAGT CTCCAGCACCTCAACATATCCAACAACCTCATTGGTGGCATCCTTGATTTGTCCAGCCTG ACCAACCTTCAGACACTAGACGTATCCCAAAATCGGTTTCAGGGAAGGATAGACAGAAAC TTCCCGGGAATATGCGGCAACCTCACTTTCCTCAGTGTCTCCAGCAACAGCTTCACAGGC AGGATAGATAAACTATTTGACGGCTGCCCAAAGCTCAAGCATGTTGATCTCAGCTGGAAC GGCTTCACCGGCATGGTCTGGCCAGGCATTGAAAGGCTTAGACAGTTCAAGGCCAACAAC AACAACCTCACAGGGAGAATTTCTCCTGGCATGTTCACAGAAGGGTGCAAATTGCGCTCA CTGAACATTGCTATCAACTCATTGCACGGTAGCTTTCCAAGCTCCATTGGCAATTGCTCT AACATGAAATTCCTTTCACTATGGGAAAACAGCTTTTATGGATCTATACCACCAGGAATT GGTTCGATTGCACGGCTTGAGGAGCTGGTCCTTGCAAGCAACAGCTTTGATGGAATTATT CCAATGGAGCTGACAAACTGTACCAACCTGAAATATTTGGACATCAGTGACAACAATTTT GGTGGAGAGGTGCAGGATGTCTTTGGGAAACTAACATGCATGAGGAGTCTGTTACTCCAA GAGAACAACTATACTGGTGGCATTACCTCATCCGGGATTCTCCAGTTGCCGAATCTAATT GTGCTTGACCTATGCTACAACCAATTCTCCGGTGATTTACCCAGTGAAATCAGCAGCATG AAGAATCTCAAGGTTCTCATGCTTGCTGAAAACAACTTCTCTGGTAAAATACCACCAACA TATGGTCAGCTTCTCAGGCTCCAAGTATTGGACTTGTCCTTCAACAGTCTTTCTGGTGAG ATTCCACCAGACATTGGTAACCTATCATCACTTCTCCTTTTGATACTTGCTGGGAACCAA ATTTCAGGTGAGATCCCAAGGGAGATAGGAAATTGTACCAGCTTAGTTTGGCTTAACCTT GCTGGAAACCAGCTAATGGGGCAAATCCCACCAGAGATGGCAAATATAGGGAGCAATCCA AGCCCAACATTCATGGAGAATCGAAAGAACCCAGAACTTTTGGAATCTATCACCAGCAAA TGTGTCGCTGTAGAGTGGCTTCCATCAAGTTATCCAGAATTCAACTTTGTTCAGTCCCTG ATGATGTCTCAGAAGAACTGCCAAACCATATGGAATCGACTCGCCATGGGGTATGACGTA CTTCCAATATCTTCACCACTGCGAACAGCATTAGGATATGTTCAGTTGTCAGGAAATCTG CTGTCTGGAGAGATACCATCTGCTATTGGTACAATGAAGAACTTCAGTTTGCTCCTTCTT GATGGAAACCGACTCTCTGGACACCTACCAGCAGAGATTGGTCATCTTCAACTTGTTGCT TTGAATATCTCAAGCAATTTTATTTCTGGTGAAATTCCCTCTGAGATTGGTCATATGGTA ACACTTGAAAGCCTTGATCTGTCAAGTAATAACTTCTCTGGTGCACTCCCATCAAACCTT AACCAACTCACTAAACTGAGTAGGTTCAATTTGTCATACAATCCGCTTCTCTCAGGGAAT GTTCCAAGCAGTGGGCAGCTCTCCACCTTTGATGAGCAATCTTTTCTGGGAGATCCACTG TTGTCTTTGAATGTAACAGCAGGTTCCAGTTCTGATTCTAGTCCAAGGGAGTTCTCATCA TCTGACACAGAGGAGCATCCTACAAACGAAGAGATCATGGTGACAACAATTGCATTCCTT GCATTCTTTTCAGTCACATTGCTTACCAGAGAATTTCATATCTTCATGTACTTGTACTTC ACAGCATCACGGAAAATTGCCAACTGTAGGATTATTTGCACCTGA