Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0320100-02
CDS Infomation

cds chromosome:IRGSP-1.0:8:13933169:13934681:1 gene:Os08g0320100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nucleotide-binding, alpha-beta plait domain containing protein. (Os08t0320100-01);Hypothetical conserved gene. (Os08t0320100-02)
Sequence

TTCAAGACGAAGAAAATATTTGTTGGTGGATTACCATCTGCTTTGAAAGAAGATGAATTC
AAGGAGTTCTTTTCGAAATTTGGAAAGGTGGTGGAACATGAAATCATTCGTGACCATTCA
ACTAACCGGTCACGAGGATTTGGATTTGTAGTCTTTGATGCAGAAAAAACTGTAGATGAA
TTATTAGCTAAGAAAGGCAATATGATTGATCTAAATGGTTCTCAGGTGGAGATCAAGAAG
GCCGAACCAAAGAAACCCTCTAACCCACCTCATCGTTCATTTGATAGTGAACCTAGGGGC
CGTCCACATGCGGATGGTTATGATGGATTGGGCAACTCTTATAATTATGGTGGTAGCTTT
GGCCCCTATAGATCACCTGGAAGTTTTGGCACTAGGCCTGGTGGTTACAGTAGTTCTTAT
GGCCCTGGTGACTATGGTAGTGGCTATGGTGCTTATGGTGGAGCATTAGGAGGATATCGT
GGAGAATCATCTCTCTATTCTAGTCGCTTTGGTAGCACTTATGGAGGAAGCTTTGGTGGT
GGTTATGCTGGTGGCAGTTATGCTGGTGGTTTAGGTGGTGCATATGGGCGTGATGCTGGG
GGTTTTGGTGGTTCTAGCTATGGCCCTAGTTATGACTCTTCTTCAGGTCCTGGTGCTGGT
GTTGGCTTTGGCACGGGTGGACTCTATGGTGCTAGAGGAGGCTATGGTAGCAGTGGTGCT
GGTGCTTCTGGTCGTTATCATCCATATGCAAGGTAG

Peptide Sequence

PEP ID

Os08t0320100-02
PEP Infomation

pep chromosome:IRGSP-1.0:8:13933169:13934681:1 gene:Os08g0320100 transcript:Os08t0320100-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nucleotide-binding, alpha-beta plait domain containing protein. (Os08t0320100-01);Hypothetical conserved gene. (Os08t0320100-02)
Sequence

FKTKKIFVGGLPSALKEDEFKEFFSKFGKVVEHEIIRDHSTNRSRGFGFVVFDAEKTVDE
LLAKKGNMIDLNGSQVEIKKAEPKKPSNPPHRSFDSEPRGRPHADGYDGLGNSYNYGGSF
GPYRSPGSFGTRPGGYSSSYGPGDYGSGYGAYGGALGGYRGESSLYSSRFGSTYGGSFGG
GYAGGSYAGGLGGAYGRDAGGFGGSSYGPSYDSSSGPGAGVGFGTGGLYGARGGYGSSGA
GASGRYHPYAR

Transcript Sequence

Transcript ID

Os08t0320100-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:13933169:13934681:1 gene:Os08g0320100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nucleotide-binding, alpha-beta plait domain containing protein. (Os08t0320100-01);Hypothetical conserved gene. (Os08t0320100-02)
Sequence

TTCAAGACGAAGAAAATATTTGTTGGTGGATTACCATCTGCTTTGAAAGAAGATGAATTC
AAGGAGTTCTTTTCGAAATTTGGAAAGGTGGTGGAACATGAAATCATTCGTGACCATTCA
ACTAACCGGTCACGAGGATTTGGATTTGTAGTCTTTGATGCAGAAAAAACTGTAGATGAA
TTATTAGCTAAGAAAGGCAATATGATTGATCTAAATGGTTCTCAGGTGGAGATCAAGAAG
GCCGAACCAAAGAAACCCTCTAACCCACCTCATCGTTCATTTGATAGTGAACCTAGGGGC
CGTCCACATGCGGATGGTTATGATGGATTGGGCAACTCTTATAATTATGGTGGTAGCTTT
GGCCCCTATAGATCACCTGGAAGTTTTGGCACTAGGCCTGGTGGTTACAGTAGTTCTTAT
GGCCCTGGTGACTATGGTAGTGGCTATGGTGCTTATGGTGGAGCATTAGGAGGATATCGT
GGAGAATCATCTCTCTATTCTAGTCGCTTTGGTAGCACTTATGGAGGAAGCTTTGGTGGT
GGTTATGCTGGTGGCAGTTATGCTGGTGGTTTAGGTGGTGCATATGGGCGTGATGCTGGG
GGTTTTGGTGGTTCTAGCTATGGCCCTAGTTATGACTCTTCTTCAGGTCCTGGTGCTGGT
GTTGGCTTTGGCACGGGTGGACTCTATGGTGCTAGAGGAGGCTATGGTAGCAGTGGTGCT
GGTGCTTCTGGTCGTTATCATCCATATGCAAGGTAGACAGCTTCAGATGCTGCCATGTGT
GTGTTAGATAAGCTTGCAGAAGGTCGGTACTAGACAAGGCAAGATAAATTATCTGCAGCT
AGAAAAGAAGAGTTGAAGTTTAATCTGCTAAGGTTATGTACCTCTCCTGCTAGATTTGGC
TCTGCTAAGGTTTATGTACGCCTGTTAGATTGGCTCTGCTAAGGTTGCTGTACCACTCCT
GACTCCTGTTAGATTGGCTTGTAGAATTTAAAATCACTTTTTCAGTGTTTAGAATTCAAG
AGATCGCACATATGCTTTGATTAGATAGCAAAGTCACTATGGCTGTTAGTTTAGCTCGTA
TTTAGTCGATTTGAGATGCAACTGGAGCATATTTTCTGTGGATCTTTCCTATCATAGGCT
TGATATGATGGCGATGAAGTATCTTGAATTCATAGTAGT