Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0310100-01
CDS Infomation

cds chromosome:IRGSP-1.0:8:13072680:13076026:1 gene:Os08g0310100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Cen8.t00833 description:Ribosomal protein L15 family protein. (Os08t0310100-01)
Sequence

ATGTGGCGCCGCGCCTCCCACCTCCTCCGCGCCACCGCCACCGCCACCGCCACCGCGGTC
TCCCGCCGCGTCCCTCACCCACATCCCGCCCCCGCAACCGCAATCTCCACCGTTCTGCCC
GCCCCAAAGCTCGCCTCATCCTTATCCTACGCCACCCAAGCCGCGGCGGCGGCGGCCGTG
CCGGCGGCGAGGGCCCCGAGAACGGTGGGGAGTCTGCTGCGGCTCAACGACCTGAGGGAC
AATCCGGGGGCGCGGAAGCAGAAGACCCGGAAGGGCCGAGGGATCGGCTCCGGGAAGGGC
AAGACGGCTGGCCGCGGCCACAAGGGGCAGAAGGCGCGGGGCACCGCCAGATTCGGCTTC
GAGGGCGGCCAGACCCCGCTCCGTCGCCGCCTCCCCCGTCGCGGCTTCAAGAACCGCTTC
TCTCTGACGTTTCAGCCATGTGGTCTGGGGAAAATTGCAAAGCTCATCAACGCTGGAAAA
ATTGATTCCTCTGAATTGATCACAATGAAGACACTGAAGGATACAGGTGCTATTGGAAAA
CAAATAAAGGATGGAATTCGACTAATGGGCCGTGGAGCAGAGGAAATTAAATGGCCAATC
CACCTTGAGGTATCAAGGACAACTGCTAGGGCAAAAGCTGCAGTTGAAGCAGCTGGTGGA
ACGGTAAGACTGGTGTACTATAATAACCTTGGATTCAGGGCACTTCTCAAGCCCGAGTGG
TTTGCAAAGAAAGGCCGACTTTTACCTAAAGCAGCAAGGCCCCCACCCAAGCAACGAGAC
AAGGTTGATAGCATTGGCCGCCTGCCTGCCCCAACAAAGCCGCTTCCCTTCACACCAGAA
GAATTGGAATTTGCAGCAAAACGTGAAGCTGCTCGAGTGATTGCGTAG

Peptide Sequence

PEP ID

Os08t0310100-01
PEP Infomation

pep chromosome:IRGSP-1.0:8:13072680:13076026:1 gene:Os08g0310100 transcript:Os08t0310100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Cen8.t00833 description:Ribosomal protein L15 family protein. (Os08t0310100-01)
Sequence

MWRRASHLLRATATATATAVSRRVPHPHPAPATAISTVLPAPKLASSLSYATQAAAAAAV
PAARAPRTVGSLLRLNDLRDNPGARKQKTRKGRGIGSGKGKTAGRGHKGQKARGTARFGF
EGGQTPLRRRLPRRGFKNRFSLTFQPCGLGKIAKLINAGKIDSSELITMKTLKDTGAIGK
QIKDGIRLMGRGAEEIKWPIHLEVSRTTARAKAAVEAAGGTVRLVYYNNLGFRALLKPEW
FAKKGRLLPKAARPPPKQRDKVDSIGRLPAPTKPLPFTPEELEFAAKREAARVIA

Transcript Sequence

Transcript ID

Os08t0310100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:13072680:13076026:1 gene:Os08g0310100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Cen8.t00833 description:Ribosomal protein L15 family protein. (Os08t0310100-01)
Sequence

GAGGAAGAAAGCCAGCCCACCACTCCAGCCATGTGGCGCCGCGCCTCCCACCTCCTCCGC
GCCACCGCCACCGCCACCGCCACCGCGGTCTCCCGCCGCGTCCCTCACCCACATCCCGCC
CCCGCAACCGCAATCTCCACCGTTCTGCCCGCCCCAAAGCTCGCCTCATCCTTATCCTAC
GCCACCCAAGCCGCGGCGGCGGCGGCCGTGCCGGCGGCGAGGGCCCCGAGAACGGTGGGG
AGTCTGCTGCGGCTCAACGACCTGAGGGACAATCCGGGGGCGCGGAAGCAGAAGACCCGG
AAGGGCCGAGGGATCGGCTCCGGGAAGGGCAAGACGGCTGGCCGCGGCCACAAGGGGCAG
AAGGCGCGGGGCACCGCCAGATTCGGCTTCGAGGGCGGCCAGACCCCGCTCCGTCGCCGC
CTCCCCCGTCGCGGCTTCAAGAACCGCTTCTCTCTGACGTTTCAGCCATGTGGTCTGGGG
AAAATTGCAAAGCTCATCAACGCTGGAAAAATTGATTCCTCTGAATTGATCACAATGAAG
ACACTGAAGGATACAGGTGCTATTGGAAAACAAATAAAGGATGGAATTCGACTAATGGGC
CGTGGAGCAGAGGAAATTAAATGGCCAATCCACCTTGAGGTATCAAGGACAACTGCTAGG
GCAAAAGCTGCAGTTGAAGCAGCTGGTGGAACGGTAAGACTGGTGTACTATAATAACCTT
GGATTCAGGGCACTTCTCAAGCCCGAGTGGTTTGCAAAGAAAGGCCGACTTTTACCTAAA
GCAGCAAGGCCCCCACCCAAGCAACGAGACAAGGTTGATAGCATTGGCCGCCTGCCTGCC
CCAACAAAGCCGCTTCCCTTCACACCAGAAGAATTGGAATTTGCAGCAAAACGTGAAGCT
GCTCGAGTGATTGCGTAGAAGGGAGCATGAAGATGCTCCTCTGAACTAGAGTTTTGAATT
GGGCATGCACAAGAATCAACTGTCCTTTATTTGAAGGATCCCTTGGTAGCAAGTTCGGTA
TGTTTGCTTGTCATTTAGACCAGTATGTCATTTTTCTTTACCCGTAGTCACATCACCAAC
ACGTGAGCCGGACAGCACTGCTATACCTCTTGATCTAAAACTCAAAGATGCTCGTGTCGC
GGTCAACAACTGCTGTGAGTCCAGCATTTGGATTATTTTAGATATATATTTAGTTCTGAT
ATC