Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0309300-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:13028145:13034173:-1 gene:Os08g0309300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Cen8.t00808 description:RER1A protein (AtRER1A). (Os08t0309300-01)
Sequence	ATGATGGATCCCTCCTCCTCCTCCGCCGCCGTCCCGGCCGCCGCCCCCGCTGTCGGTGAC GGCGGCGGCGGCGGCGGCGGGGGCCCGGCGGTCGCCGTCTCCTCCGCGGTCGCGATGGCG TCCAGGCGGTTCCAGCACCTGCTGGACCGGTCCACGCCCCACGTCGGGCGGCGGTGGCTG GCCTTCGCCGGCGTGGCGGCCGCGTACGCGCTGCGTGTCTGGTTCGCGGGAGGGTACTAC ATCGTGACCTACGCCCTCGGCATCTACATCCTCAACCTCCTCATCGCCTTCCTCTCGCCC CAGGTCGACCCCGAGGTCGCCGAGGTGCTCGGCGAGGGGGGGGCCGCGCTCCCCACCCGC GCATCTGACGAGTTCCGCCCTTTCGTCCGTCGCCTTCCGGAGTTCAAATTCTGGTATTCC ATTGTTAAAGCATTCTGTATTGCTTTTGTCCTGACGTTCTTCAGTGTGTTCGATGTGCCT GTGTTTTGGCCTATTCTTCTATTCTATTGGGTGGTTTTGTTTACAGTCACAATGAAGCGA CAGATTCTTCATATGATAAAATACAGATATGTTCCATTCTCCTTCGGGAAGCAGCGTTAT AATGGAAAAAGGGTAGCTTCTGCTGATGATCTCACCCTTCCCAAGGATTAA

Peptide Sequence

PEP ID	Os08t0309300-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:13028145:13034173:-1 gene:Os08g0309300 transcript:Os08t0309300-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Cen8.t00808 description:RER1A protein (AtRER1A). (Os08t0309300-01)
Sequence	MMDPSSSSAAVPAAAPAVGDGGGGGGGGPAVAVSSAVAMASRRFQHLLDRSTPHVGRRWL AFAGVAAAYALRVWFAGGYYIVTYALGIYILNLLIAFLSPQVDPEVAEVLGEGGAALPTR ASDEFRPFVRRLPEFKFWYSIVKAFCIAFVLTFFSVFDVPVFWPILLFYWVVLFTVTMKR QILHMIKYRYVPFSFGKQRYNGKRVASADDLTLPKD

Transcript Sequence

Transcript ID	Os08t0309300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:13028145:13034173:-1 gene:Os08g0309300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Cen8.t00808 description:RER1A protein (AtRER1A). (Os08t0309300-01)
Sequence	ACCGCGACGAGCACGAGATCCCAGCGCTGCCCCGCCCGACGCCATGATGGATCCCTCCTC CTCCTCCGCCGCCGTCCCGGCCGCCGCCCCCGCTGTCGGTGACGGCGGCGGCGGCGGCGG CGGGGGCCCGGCGGTCGCCGTCTCCTCCGCGGTCGCGATGGCGTCCAGGCGGTTCCAGCA CCTGCTGGACCGGTCCACGCCCCACGTCGGGCGGCGGTGGCTGGCCTTCGCCGGCGTGGC GGCCGCGTACGCGCTGCGTGTCTGGTTCGCGGGAGGGTACTACATCGTGACCTACGCCCT CGGCATCTACATCCTCAACCTCCTCATCGCCTTCCTCTCGCCCCAGGTCGACCCCGAGGT CGCCGAGGTGCTCGGCGAGGGGGGGGCCGCGCTCCCCACCCGCGCATCTGACGAGTTCCG CCCTTTCGTCCGTCGCCTTCCGGAGTTCAAATTCTGGTATTCCATTGTTAAAGCATTCTG TATTGCTTTTGTCCTGACGTTCTTCAGTGTGTTCGATGTGCCTGTGTTTTGGCCTATTCT TCTATTCTATTGGGTGGTTTTGTTTACAGTCACAATGAAGCGACAGATTCTTCATATGAT AAAATACAGATATGTTCCATTCTCCTTCGGGAAGCAGCGTTATAATGGAAAAAGGGTAGC TTCTGCTGATGATCTCACCCTTCCCAAGGATTAAGTACTTGGGATTCTGTAACTGCAAAA TGTGCTTTTAGTTACTACGTAGCAGTTGGAAATGGCCTGTAATGGCTGCACAGGTAGCTC CATCGATCGCAAGGATCTGAACGTTACAAAATGCTAACACCAAGCATTAGAACCTCATAA AAAACCATGGTATCTTTACAATGCTGAGAGAATAGGCCTCTAGCACCGCTTTTCGCAGTG TTTCCCTGTACTAGAGCAAAACCGTATGTACACATTTGTTGCTCCATATATCTCCCTGTA CTATATTAGCGCCGAGAAGTGAGAAGATGGATGACCCACAGGATCTTGTATAACATTTGT TGGAGTGTTTTACCCAACTACTCATGTTTCACTGAGTAAGTTGCTGCTTGCTATGCAGTT CAGCG