Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0308700-00
CDS Infomation

cds chromosome:IRGSP-1.0:8:13000764:13005577:-1 gene:Os08g0308700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Cen8.t00793 description:Similar to DCL protein. (Os08t0308700-00)
Sequence

ATGGCCCTGGCAGCGGCACTCGCCCGCGCCGCCACCGCCGCGGGGCCGCTCTTCCTCCGG
GCCCGCCCCCTCGCGCCGTGCACCGCCGCACCCGCGCCCGCACTGTCCCGCCGCAGGAGC
CTCCTCTCCGGCGCCCACACCGCCGACGAGCCCCCTCCCCCCACGCAGCCGCCGCCGTCC
AAGCTGCCCGACGCCCCCGGAGCGGTGCCCCCGCTGCCGTGGAGGGCCGCCGAGGCGGAA
ATCGTCCGCGACATCGATCCCGTCGTGCAGCTCATCAAGGATATCCTCCACTCCGACAGG
TATGGAGATGGTGAATGTCTCAGCCCAAAGGATGAAAATATTATCGTCGAGAAGCTTCTT
GCTTACCATCCACGTGTGGATGATAAGATTGGTTGTGGACTTGATGCTATAATGGTTGAT
AAGCACCCACAGTTCAGAAAGTCAAGATGCCTTTTTGTTGTTCGCACGGATGGTGTTTGG
ATTGATTTTTCATACCAAAAGTGCCTCCGTGCATACATTCGAGAAAAGTATCCATCACAT
GCAGAGAGATTTATACGAGAACATTTCAAGCGAACCTGA

Peptide Sequence

PEP ID

Os08t0308700-00
PEP Infomation

pep chromosome:IRGSP-1.0:8:13000764:13005577:-1 gene:Os08g0308700 transcript:Os08t0308700-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Cen8.t00793 description:Similar to DCL protein. (Os08t0308700-00)
Sequence

MALAAALARAATAAGPLFLRARPLAPCTAAPAPALSRRRSLLSGAHTADEPPPPTQPPPS
KLPDAPGAVPPLPWRAAEAEIVRDIDPVVQLIKDILHSDRYGDGECLSPKDENIIVEKLL
AYHPRVDDKIGCGLDAIMVDKHPQFRKSRCLFVVRTDGVWIDFSYQKCLRAYIREKYPSH
AERFIREHFKRT

Transcript Sequence

Transcript ID

Os08t0308700-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:13000764:13005577:-1 gene:Os08g0308700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Cen8.t00793 description:Similar to DCL protein. (Os08t0308700-00)
Sequence

CTTCGTCAGTCGCTCGCTGTCCCGAACTCGGGCACACCGCACACGGCACCTCACCTCACC
CCACCCCACCCCACCCCCATCCAGCAAGTCACCCTCCCGCCGCATGGCCCTGGCAGCGGC
ACTCGCCCGCGCCGCCACCGCCGCGGGGCCGCTCTTCCTCCGGGCCCGCCCCCTCGCGCC
GTGCACCGCCGCACCCGCGCCCGCACTGTCCCGCCGCAGGAGCCTCCTCTCCGGCGCCCA
CACCGCCGACGAGCCCCCTCCCCCCACGCAGCCGCCGCCGTCCAAGCTGCCCGACGCCCC
CGGAGCGGTGCCCCCGCTGCCGTGGAGGGCCGCCGAGGCGGAAATCGTCCGCGACATCGA
TCCCGTCGTGCAGCTCATCAAGGATATCCTCCACTCCGACAGGTATGGAGATGGTGAATG
TCTCAGCCCAAAGGATGAAAATATTATCGTCGAGAAGCTTCTTGCTTACCATCCACGTGT
GGATGATAAGATTGGTTGTGGACTTGATGCTATAATGGTTGATAAGCACCCACAGTTCAG
AAAGTCAAGATGCCTTTTTGTTGTTCGCACGGATGGTGTTTGGATTGATTTTTCATACCA
AAAGTGCCTCCGTGCATACATTCGAGAAAAGTATCCATCACATGCAGAGAGATTTATACG
AGAACATTTCAAGCGAACCTGAAGGTAATAGAAAAGAACGCTGGTATCCTTCAGCAATAC
AGGGATGTTGTAAGTTTTGGAATCGTTTGTGTAAATTATTGAGCCTAATGGCATGTTTGC
TTCTTCCATTGCCTACTTGTGTTTATATGGTCTAAATCTCTAAATAGAAAGATTTTGGAT
CTCTTGAGGAATGCCCACAAGACCACAAGGTTAAGTGCTGGT