Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0300300-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:12350726:12356984:1 gene:Os08g0300300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CYSTATHIONINE B-SYNTHASE DOMAIN CONTAINING CHLORIDE CHANNEL PROTEIN 6 description:Similar to Chloride channel-like protein Osclc. (Os08t0300300-01)
Sequence	ATGGCGTGCACGGCTCCACGGGAGGAGGACCTCCTCATGGAGGAAGACGAGCACCGGCCG CCTCTCAACCGGGCCCTGCTCCACCGCAGCGCCACCAACAACACCTCCCAGGTTGCCATG GTCGGCTCCAACCCCTGCCCCATAGAGAGCCTCGATTACGAGATAATAGAGAACGACCTG TTCGATCAGAACTGGAGGTCGAGAGGGAAAGCCGACCAGGTGCGGTACGTGGTGCTCAAG TGGACCTTCTGCTTCGCCATCGGCATCATCACCGGCATCGCCGGCTTCGTCATCAACCTC GCCGTCGAGAATGTCGCCGGCCTCAAGCACACCGCCGTGTCCGCCCTCATGGAGTCCAGC AGCTATTGGACAGCGTTCTGGCTGTTCGCCGGAACCAACCTGGCCCTGCTGCTGTTCGCG TCGTCCATCACGGCGTTCGTGTCGCCGGCGGCCGGCGGGTCGGGGATCCCGGAGGTGAAG GCCTACCTCAACGGCGTGGACGCGCCAAACATCTTCTCGCTCAGGACACTCGCTGTCAAG ATAATCGGTAACATCGCGGCCGTGTCATCCTCGCTGCACGTCGGCAAAGCTGGCCCAATG GTACACACGGGCGCGTGCATCGCCGCCATCTTCGGCCAGGGCGGGTCGCGCAAGTACGGC CTCACCTGCCGCTGGCTGCGCTACTTCAAGAACGACCGCGACCGCCGTGATCTCGTCACC ATAGGCGCCGGCGCAGGTGTCACCGCGGCTTTCCGCGCCCCCGTCGGCGGCGTCCTGTTC GCTCTCGAATCACTCTCGTCATGGTGGCGGAGCGCGCTGATCTGGCGGTCGTTCTTCACG ACGGCGGTGGTGGCGGTGGTGCTGCGGATGTTCATCGAGCTGTGCGCGTCGGGGAAGTGC GGGCTGTTCGGCAAGGGTGGGCTGATCATGTACGACGTCAGCACCAAGTTTGATGACCTC ATGACCTACCACCTCAAGGACATCCCCATCGTCGTCCTCATCGGCGTGATCGGCGCCATC TTGGGCGCCCTCTACAACTTCCTCATGATGAAGGTCCTGCGCGTCTACAGCGTGATCAAC GAGAGGGGCAACGCGCACAAGCTGCTTCTGGCGGCGGTGGTGTCCATCCTGACGTCGTGC TGCGTGTTCGGCCTGCCGTGGCTGGCGCCGTGCCGGCCGTGCCCGACAGCCGGGGCGCCG TCGCCGCCGAACGGGACGTGCCATTCGCTGAACCGATTCCGGCGGTTCCACTGCCCGGCG GGGCACTACAACGACTTGGCCAGCCTCTTCCTCAACATCAACGACGACGCCATCCGCAAC CTCTACTCCACGGGCACCAACGACGTCTACCACCCGGGCTCCATGCTCGCCTTTTTCGTC GCCTCCTACGCGCTCGGCGTGCTCAGCTACGGCGTCGTCGCGCCGTCGGGGCTGTTCGTC CCCATCATCCTCACCGGCGCCACCTACGGCCGCCTCGTCGCCATGCTGCTCGGCGGCCGC TCAGGACTCGACCACGGCCTCGTCGCCATCCTCGGCTCCGCCTCCTTCCTCGGCGGCACG CTCCGGATGACGGTGTCCGTGTGCGTCATCATCCTGGAGCTCACCAACAACCTGCTCCTC CTCCCGCTCGTCATGCTCGTGCTGCTCATCTCCAAGACCGTCGCCGACTCCTTCAACTCC AGCATCTACGACCTCATCCTCAATCTCAAGGGCCTCCCGCACCTCGACGGCCACGCCGAG CCGTACATGCGGCAGCTCACCGTCGGCGACGTGGTGGCCGGGCCGCTGCGGAGCTTCAAC GGCGTCGAGAAGGTGGGCCACATCGTGCACACGCTCCGGACCACGGGGCACCACGCGTTC CCGGTGGTCGACGAGCCGCCCTTCTCGCCGGCACCGGTGCTGTACGGCCTCGTGCTGCGC GCGCACCTGCTGGTACTGCTCAAGAAGCGGGAGTTCCTGACGGCGCCGGTGCGGTGCCCC AAGGACTACATGGCCGGGAGGTTCGAGGCGCAGGACTTCGACAAGCGCGGGTCCGGGAAG CAGGACACCATCGCCGACGTGGAGCTGTCGCCGGAGGAGATGGAGATGTACGTCGACCTG CACCCCTTCACCAACACGTCGCCGTACACGGTGGTGGAGACCATGTCGCTGGCCAAGGCG CTCGTCCTCTTCCGCGAGGTCGGCCTGCGACACCTCCTCGTCGTGCCCAAGTCCTGCGAC AGGTCGCCGGTGGTGGGGATCCTGACGAGGCACGACTTCATGCCGGAGCACATCCTCGGG CTGCACCCGGTGCTGGTGGGAAGCCGGTGGAAGCGGCTCCGGTGGCAGAAGGGCGCCGTC GCCAAGAAATTCCGGTCGCTCCTCGACTGGCTAGCCAACGACAGCGGCTGA

Peptide Sequence

PEP ID	Os08t0300300-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:12350726:12356984:1 gene:Os08g0300300 transcript:Os08t0300300-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CYSTATHIONINE B-SYNTHASE DOMAIN CONTAINING CHLORIDE CHANNEL PROTEIN 6 description:Similar to Chloride channel-like protein Osclc. (Os08t0300300-01)
Sequence	MACTAPREEDLLMEEDEHRPPLNRALLHRSATNNTSQVAMVGSNPCPIESLDYEIIENDL FDQNWRSRGKADQVRYVVLKWTFCFAIGIITGIAGFVINLAVENVAGLKHTAVSALMESS SYWTAFWLFAGTNLALLLFASSITAFVSPAAGGSGIPEVKAYLNGVDAPNIFSLRTLAVK IIGNIAAVSSSLHVGKAGPMVHTGACIAAIFGQGGSRKYGLTCRWLRYFKNDRDRRDLVT IGAGAGVTAAFRAPVGGVLFALESLSSWWRSALIWRSFFTTAVVAVVLRMFIELCASGKC GLFGKGGLIMYDVSTKFDDLMTYHLKDIPIVVLIGVIGAILGALYNFLMMKVLRVYSVIN ERGNAHKLLLAAVVSILTSCCVFGLPWLAPCRPCPTAGAPSPPNGTCHSLNRFRRFHCPA GHYNDLASLFLNINDDAIRNLYSTGTNDVYHPGSMLAFFVASYALGVLSYGVVAPSGLFV PIILTGATYGRLVAMLLGGRSGLDHGLVAILGSASFLGGTLRMTVSVCVIILELTNNLLL LPLVMLVLLISKTVADSFNSSIYDLILNLKGLPHLDGHAEPYMRQLTVGDVVAGPLRSFN GVEKVGHIVHTLRTTGHHAFPVVDEPPFSPAPVLYGLVLRAHLLVLLKKREFLTAPVRCP KDYMAGRFEAQDFDKRGSGKQDTIADVELSPEEMEMYVDLHPFTNTSPYTVVETMSLAKA LVLFREVGLRHLLVVPKSCDRSPVVGILTRHDFMPEHILGLHPVLVGSRWKRLRWQKGAV AKKFRSLLDWLANDSG

Transcript Sequence

Transcript ID	Os08t0300300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:12350726:12356984:1 gene:Os08g0300300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CYSTATHIONINE B-SYNTHASE DOMAIN CONTAINING CHLORIDE CHANNEL PROTEIN 6 description:Similar to Chloride channel-like protein Osclc. (Os08t0300300-01)
Sequence	GCTCCCCTCGTCTCCCTCTGCGGCAAGCTCTCTCATGGCGTGCACGGCTCCACGGGAGGA GGACCTCCTCATGGAGGAAGACGAGCACCGGCCGCCTCTCAACCGGGCCCTGCTCCACCG CAGCGCCACCAACAACACCTCCCAGGTTGCCATGGTCGGCTCCAACCCCTGCCCCATAGA GAGCCTCGATTACGAGATAATAGAGAACGACCTGTTCGATCAGAACTGGAGGTCGAGAGG GAAAGCCGACCAGGTGCGGTACGTGGTGCTCAAGTGGACCTTCTGCTTCGCCATCGGCAT CATCACCGGCATCGCCGGCTTCGTCATCAACCTCGCCGTCGAGAATGTCGCCGGCCTCAA GCACACCGCCGTGTCCGCCCTCATGGAGTCCAGCAGCTATTGGACAGCGTTCTGGCTGTT CGCCGGAACCAACCTGGCCCTGCTGCTGTTCGCGTCGTCCATCACGGCGTTCGTGTCGCC GGCGGCCGGCGGGTCGGGGATCCCGGAGGTGAAGGCCTACCTCAACGGCGTGGACGCGCC AAACATCTTCTCGCTCAGGACACTCGCTGTCAAGATAATCGGTAACATCGCGGCCGTGTC ATCCTCGCTGCACGTCGGCAAAGCTGGCCCAATGGTACACACGGGCGCGTGCATCGCCGC CATCTTCGGCCAGGGCGGGTCGCGCAAGTACGGCCTCACCTGCCGCTGGCTGCGCTACTT CAAGAACGACCGCGACCGCCGTGATCTCGTCACCATAGGCGCCGGCGCAGGTGTCACCGC GGCTTTCCGCGCCCCCGTCGGCGGCGTCCTGTTCGCTCTCGAATCACTCTCGTCATGGTG GCGGAGCGCGCTGATCTGGCGGTCGTTCTTCACGACGGCGGTGGTGGCGGTGGTGCTGCG GATGTTCATCGAGCTGTGCGCGTCGGGGAAGTGCGGGCTGTTCGGCAAGGGTGGGCTGAT CATGTACGACGTCAGCACCAAGTTTGATGACCTCATGACCTACCACCTCAAGGACATCCC CATCGTCGTCCTCATCGGCGTGATCGGCGCCATCTTGGGCGCCCTCTACAACTTCCTCAT GATGAAGGTCCTGCGCGTCTACAGCGTGATCAACGAGAGGGGCAACGCGCACAAGCTGCT TCTGGCGGCGGTGGTGTCCATCCTGACGTCGTGCTGCGTGTTCGGCCTGCCGTGGCTGGC GCCGTGCCGGCCGTGCCCGACAGCCGGGGCGCCGTCGCCGCCGAACGGGACGTGCCATTC GCTGAACCGATTCCGGCGGTTCCACTGCCCGGCGGGGCACTACAACGACTTGGCCAGCCT CTTCCTCAACATCAACGACGACGCCATCCGCAACCTCTACTCCACGGGCACCAACGACGT CTACCACCCGGGCTCCATGCTCGCCTTTTTCGTCGCCTCCTACGCGCTCGGCGTGCTCAG CTACGGCGTCGTCGCGCCGTCGGGGCTGTTCGTCCCCATCATCCTCACCGGCGCCACCTA CGGCCGCCTCGTCGCCATGCTGCTCGGCGGCCGCTCAGGACTCGACCACGGCCTCGTCGC CATCCTCGGCTCCGCCTCCTTCCTCGGCGGCACGCTCCGGATGACGGTGTCCGTGTGCGT CATCATCCTGGAGCTCACCAACAACCTGCTCCTCCTCCCGCTCGTCATGCTCGTGCTGCT CATCTCCAAGACCGTCGCCGACTCCTTCAACTCCAGCATCTACGACCTCATCCTCAATCT CAAGGGCCTCCCGCACCTCGACGGCCACGCCGAGCCGTACATGCGGCAGCTCACCGTCGG CGACGTGGTGGCCGGGCCGCTGCGGAGCTTCAACGGCGTCGAGAAGGTGGGCCACATCGT GCACACGCTCCGGACCACGGGGCACCACGCGTTCCCGGTGGTCGACGAGCCGCCCTTCTC GCCGGCACCGGTGCTGTACGGCCTCGTGCTGCGCGCGCACCTGCTGGTACTGCTCAAGAA GCGGGAGTTCCTGACGGCGCCGGTGCGGTGCCCCAAGGACTACATGGCCGGGAGGTTCGA GGCGCAGGACTTCGACAAGCGCGGGTCCGGGAAGCAGGACACCATCGCCGACGTGGAGCT GTCGCCGGAGGAGATGGAGATGTACGTCGACCTGCACCCCTTCACCAACACGTCGCCGTA CACGGTGGTGGAGACCATGTCGCTGGCCAAGGCGCTCGTCCTCTTCCGCGAGGTCGGCCT GCGACACCTCCTCGTCGTGCCCAAGTCCTGCGACAGGTCGCCGGTGGTGGGGATCCTGAC GAGGCACGACTTCATGCCGGAGCACATCCTCGGGCTGCACCCGGTGCTGGTGGGAAGCCG GTGGAAGCGGCTCCGGTGGCAGAAGGGCGCCGTCGCCAAGAAATTCCGGTCGCTCCTCGA CTGGCTAGCCAACGACAGCGGCTGATCGATCGATGCAGAGGAGTACATTATATTGATACA CGCACATACATTCTGGCCGGACAACGAGGGATGATGATGATGGAGTGCTTGCACATAAAT ATACGTACATACACGTTGGATTGGTCATTGAGTTTTTGTGAATTTTGTGCAATAATAACA GCACCTATACCTGGTGGTCATGAATGACATAGACACAATCATTCAATTTTCTTTTCTTCT TTTTGCTTGTATATTACTCCCTCTATTTTATATTATAAGTTGTTTTGATTTTTT