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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0299000-02
CDS Infomation

cds chromosome:IRGSP-1.0:8:12170902:12177361:1 gene:Os08g0299000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Mediator of ErbB2-driven cell motility (Memo), related domain containing protein. (Os08t0299000-01);Mediator of ErbB2-driven cell motility (Memo), related domain containing protein. (Os08t0299000-02)
Sequence

ATGGAGCGCGTGAGGAGGGCTTCGCACGCCGGCTCTTGGTACACCAACAATGCCAGGAAA
CTGGATGAGGAACTTGATGGTTGGCTGAGGGCTGCTGGTCTCACCAAGTCCCCTGATGTG
AGGGCAGTAATTGCGCCCCATGCTGGCTATTCATACTCAGGGCGGTGTGCGGCTTATGCT
TTTGGCAACATTGATCCAACTAACATTTCTCGGGTCTTCCTGTTAGGCCCTTCACATCAC
TACTATACTCCAAAATGTGCATTAACAAGAGCTACTATTTATAGCACCCCAATTGGGGAT
TTGCCAGTAGACCATGAAGTAATTGAGGAACTCAACGCTACAGGAAAATTTGATTTTATG
GACCTTAGTGTGGATGAAGCTGAACATAGCATGGAAATGCATTTACCCTATCTTTCTAAA
GTTTTTCAGGGACATAACGTAAAAGTTGTCCCTATCCTTGTTGGTGCCCTTAACTCCCAA
AATGAAGCCATGTATGGGCAGTTGCTCTCTAAATATCTTGACGATCCGAAGAACTTCTTT
TCTATCTCCTCAGATTTCTGCCACTGGGGAACCCGGTTTAGTTACACATACTACGATAAG
AGCCATGGTGCTATACATAAATCGATAGAGGCCTTGGACCGCATGGGCATGGAGATAATA
GAGACTGGTAATCCAGATGCATTCAAGCAGTACCTGCAAGAGTATGAGAATACCATATGT
GGACGCCACCCCATCAGCGTTTTCCTCAGCATGCTGAAACATTGTTTGACAAAGATCAAG
ATCGGATTTGTTCGGTATGAGCAGTCAAGCCAGTGCAAGAGCATGAGGGACAGCAGCGTG
AGCTACGCTTCTGCGGCAGCCAAGGTGGATACTCCAGCCGAAGAAGAGAAGGATTAG

Peptide Sequence

PEP ID

Os08t0299000-02
PEP Infomation

pep chromosome:IRGSP-1.0:8:12170902:12177361:1 gene:Os08g0299000 transcript:Os08t0299000-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Mediator of ErbB2-driven cell motility (Memo), related domain containing protein. (Os08t0299000-01);Mediator of ErbB2-driven cell motility (Memo), related domain containing protein. (Os08t0299000-02)
Sequence

MERVRRASHAGSWYTNNARKLDEELDGWLRAAGLTKSPDVRAVIAPHAGYSYSGRCAAYA
FGNIDPTNISRVFLLGPSHHYYTPKCALTRATIYSTPIGDLPVDHEVIEELNATGKFDFM
DLSVDEAEHSMEMHLPYLSKVFQGHNVKVVPILVGALNSQNEAMYGQLLSKYLDDPKNFF
SISSDFCHWGTRFSYTYYDKSHGAIHKSIEALDRMGMEIIETGNPDAFKQYLQEYENTIC
GRHPISVFLSMLKHCLTKIKIGFVRYEQSSQCKSMRDSSVSYASAAAKVDTPAEEEKD

Transcript Sequence

Transcript ID

Os08t0299000-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:12170902:12177361:1 gene:Os08g0299000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Mediator of ErbB2-driven cell motility (Memo), related domain containing protein. (Os08t0299000-01);Mediator of ErbB2-driven cell motility (Memo), related domain containing protein. (Os08t0299000-02)
Sequence

GCTGCCGCCATCGAAACCGCTCTTCTTCCCTGCTGCGGGGTGAGGGATGGAGCGCGTGAG
GAGGGCTTCGCACGCCGGCTCTTGGTACACCAACAATGCCAGGAAACTGGATGAGGAACT
TGATGGTTGGCTGAGGGCTGCTGGTCTCACCAAGTCCCCTGATGTGAGGGCAGTAATTGC
GCCCCATGCTGGCTATTCATACTCAGGGCGGTGTGCGGCTTATGCTTTTGGCAACATTGA
TCCAACTAACATTTCTCGGGTCTTCCTGTTAGGCCCTTCACATCACTACTATACTCCAAA
ATGTGCATTAACAAGAGCTACTATTTATAGCACCCCAATTGGGGATTTGCCAGTAGACCA
TGAAGTAATTGAGGAACTCAACGCTACAGGAAAATTTGATTTTATGGACCTTAGTGTGGA
TGAAGCTGAACATAGCATGGAAATGCATTTACCCTATCTTTCTAAAGTTTTTCAGGGACA
TAACGTAAAAGTTGTCCCTATCCTTGTTGGTGCCCTTAACTCCCAAAATGAAGCCATGTA
TGGGCAGTTGCTCTCTAAATATCTTGACGATCCGAAGAACTTCTTTTCTATCTCCTCAGA
TTTCTGCCACTGGGGAACCCGGTTTAGTTACACATACTACGATAAGAGCCATGGTGCTAT
ACATAAATCGATAGAGGCCTTGGACCGCATGGGCATGGAGATAATAGAGACTGGTAATCC
AGATGCATTCAAGCAGTACCTGCAAGAGTATGAGAATACCATATGTGGACGCCACCCCAT
CAGCGTTTTCCTCAGCATGCTGAAACATTGTTTGACAAAGATCAAGATCGGATTTGTTCG
GTATGAGCAGTCAAGCCAGTGCAAGAGCATGAGGGACAGCAGCGTGAGCTACGCTTCTGC
GGCAGCCAAGGTGGATACTCCAGCCGAAGAAGAGAAGGATTAGATTGTGGATTTTGCACG
GATCACTTGTACAACCCCCGCCTGCAGCTAGCATGATCGGTTTGCAATCCATTGTATCTG
CCTGCCAAACTCTATAAAGTAATAACAGGTTCTTGTTGAAGACCGATCGTTGCAGCAAGG
TGAACACCAGGTAACAACAATGAATAAGGAATACTCATATTTCTGGATACATTTACCCTA
GCATCTACGAGCTGAATATTCTTTTTGGGGTTTGAGGCCTGCTTGATAGCGGTGGGGTTT
TTTTTTTTCGATATAGATTCTACAGCAGCAAGCTCAACAAGGCAACAACTATACCACTAG
AAAAAAAAATACTAGCACAAACAACTAGTTACTCGCGGTAACAGTAAGCAAAAATCAGAA
GAATATGGATAGCATGATTTCACTGAGATGCGAAGCTGATGTATTTCTCGAAATTCAAAT
CTTTAAGGGCATTATACCTCTTTGTTGAGTAGCTCATAAAGAGATTGCTTGGTC