Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0296900-03
CDS Infomation	cds chromosome:IRGSP-1.0:8:11984655:11988845:-1 gene:Os08g0296900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide-like helical domain containing protein. (Os08t0296900-01);Hypothetical gene. (Os08t0296900-02);Similar to Heat shock protein 70. (Os08t0296900-03)
Sequence	ATGGACGATAAGGAAAACAAGGGTTTAGATAAGGAAGGAAAGAATGGCAAACCAGGGAAG CACAGTGCAGGAAAGAAAATTAGGCGTGCTGACGCCAAGAAGCAAAAGCATTCCGCTATG GAGCCAGTGCATCATGCTGAGGAAAATCGTCATGAGCGTTACACGGAGACCAGTGTCCAT GTCAAGGAAGCAATGAAGGATCTGAAGCTGGTCTTTGGGGAGGACATTAGATGTGCTCAA ATGCCAGCTAACTGCAATCTGTCACAATTGAGAGACATAGTTCAAAACAAGTTTCCATCG TTGAAAGCGTTGCTTATTAAATATAAGGACAAGGAAGGTGACTTGGTGACGATCACTTCA TCGGATGAGCTTAGATGGGCCTACAGCTTGGCAGATCTGGAAGGGCCAATTCGACTGTAC ATTGTAGCGGTTGATCCTGCACAAGAGCTAGGTGTGGATGTGGTCAGGAGACGCTCTTCA TTTGCCTCATTAGAGAAAGCTTATTATAGCATGTCGGAGAATGGGAGCAGTAGGCATGAT GATGATCACAACTGCTCTATTGATGACTGGATGATACAATTTGCTCGGCTATTCAAGAAC CATCTTGGTTTTGATTCCGACTCGTATTTGGATCTCCACGACCTTGGCATGAGATTGTAC TATGAAGCTATGGAAGACACTGTTGCAAGTGAAGAAGCACAGGAAATATTTCAAGTTGCA GAGCTAAAATTCCAGGAAATGGCAGCATTGGCTCTGTTCAACTGGGGCAATGTTCACATG GCTTCTGCGAGAAAAAGGCCTCCCTTGTCAGACGATGCTTCAATGGAATGTATACTTGAG CAGGTTAAGGTTGCTTATGAATGGGCTTGTGCGGAATATGCCAAAGCGGGCGCGAAGTAT GGAGAAGCTGTGAAAACAAAACCAGATTTTTTTGAAGGTCTTATTGCACTTGGGCAGCAG CAGTTTGAGCAGGCCAAGCTCTGTTGGTATTATGCTCTTGCATGTAAGATAGACATGGGA ACTGAGGTTTTGGGATTATTTAACCATGCAGAGGATAATATGGAAAAGGGAATGGGGATG TGGGAGGGAATGGAAAATACACGCTTGAGGGGGCTCTCAAAACCAAGTAAGGAGAAGATC ATATTTGAGAAGATGGGCATAGATGGGTACATGAAGGATATGTCTTCCGATGAAGCATTT GAACAGGCTTCTAGTATCCGATCGCATGTAAATATTTTGTGGGGCACCATTCTTTATGAA CGTTCTGTAGTGGAATTTATCTTGGGACTTCCTAGTTGGGAGGAGTCTCTAACGGTTGCT ATAGAAAAATTTAAGACTGGAGGTGCTTCTCCCGCAGACATCAATGTGATGGTAAAAAAC CATTCTGCTAATGAAACTACTCAAGAAGGACTGAGTTTTAAGGTTGAAGAAATAGTTCAA GCATGGAATGAAATGTATGATGCAAAGAAGTGGAGAAATGGAGTGCCATCTTTCCGACTT GAGCCAATATTCCGACGTAGAGCTCCAAAGTTGCATCATATGCTGGAGCATATACACTAT GCTTGA

Peptide Sequence

PEP ID	Os08t0296900-03
PEP Infomation	pep chromosome:IRGSP-1.0:8:11984655:11988845:-1 gene:Os08g0296900 transcript:Os08t0296900-03 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide-like helical domain containing protein. (Os08t0296900-01);Hypothetical gene. (Os08t0296900-02);Similar to Heat shock protein 70. (Os08t0296900-03)
Sequence	MDDKENKGLDKEGKNGKPGKHSAGKKIRRADAKKQKHSAMEPVHHAEENRHERYTETSVH VKEAMKDLKLVFGEDIRCAQMPANCNLSQLRDIVQNKFPSLKALLIKYKDKEGDLVTITS SDELRWAYSLADLEGPIRLYIVAVDPAQELGVDVVRRRSSFASLEKAYYSMSENGSSRHD DDHNCSIDDWMIQFARLFKNHLGFDSDSYLDLHDLGMRLYYEAMEDTVASEEAQEIFQVA ELKFQEMAALALFNWGNVHMASARKRPPLSDDASMECILEQVKVAYEWACAEYAKAGAKY GEAVKTKPDFFEGLIALGQQQFEQAKLCWYYALACKIDMGTEVLGLFNHAEDNMEKGMGM WEGMENTRLRGLSKPSKEKIIFEKMGIDGYMKDMSSDEAFEQASSIRSHVNILWGTILYE RSVVEFILGLPSWEESLTVAIEKFKTGGASPADINVMVKNHSANETTQEGLSFKVEEIVQ AWNEMYDAKKWRNGVPSFRLEPIFRRRAPKLHHMLEHIHYA

Transcript Sequence

Transcript ID	Os08t0296900-03
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:11984655:11988845:-1 gene:Os08g0296900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide-like helical domain containing protein. (Os08t0296900-01);Hypothetical gene. (Os08t0296900-02);Similar to Heat shock protein 70. (Os08t0296900-03)
Sequence	GGGGCAGGAGCTGATTCATGTCGAAGATTATGAGCAAAGTGAGAAAACAGAGCTGAAGAT TAATGGTCAGGAGAATGGAGAAAATCGTGCCGGGAAGGAGCAATTTGATTGTAATGTACC TGTCAAGCAAGAAATTCGAACCGACCAGCCGGAAGCAAATGGAGTAGGAAAACATCAATA TCATATGGACGATAAGGAAAACAAGGGTTTAGATAAGGAAGGAAAGAATGGCAAACCAGG GAAGCACAGTGCAGGAAAGAAAATTAGGCGTGCTGACGCCAAGAAGCAAAAGCATTCCGC TATGGAGCCAGTGCATCATGCTGAGGAAAATCGTCATGAGCGTTACACGGAGACCAGTGT CCATGTCAAGGAAGCAATGAAGGATCTGAAGCTGGTCTTTGGGGAGGACATTAGATGTGC TCAAATGCCAGCTAACTGCAATCTGTCACAATTGAGAGACATAGTTCAAAACAAGTTTCC ATCGTTGAAAGCGTTGCTTATTAAATATAAGGACAAGGAAGGTGACTTGGTGACGATCAC TTCATCGGATGAGCTTAGATGGGCCTACAGCTTGGCAGATCTGGAAGGGCCAATTCGACT GTACATTGTAGCGGTTGATCCTGCACAAGAGCTAGGTGTGGATGTGGTCAGGAGACGCTC TTCATTTGCCTCATTAGAGAAAGCTTATTATAGCATGTCGGAGAATGGGAGCAGTAGGCA TGATGATGATCACAACTGCTCTATTGATGACTGGATGATACAATTTGCTCGGCTATTCAA GAACCATCTTGGTTTTGATTCCGACTCGTATTTGGATCTCCACGACCTTGGCATGAGATT GTACTATGAAGCTATGGAAGACACTGTTGCAAGTGAAGAAGCACAGGAAATATTTCAAGT TGCAGAGCTAAAATTCCAGGAAATGGCAGCATTGGCTCTGTTCAACTGGGGCAATGTTCA CATGGCTTCTGCGAGAAAAAGGCCTCCCTTGTCAGACGATGCTTCAATGGAATGTATACT TGAGCAGGTTAAGGTTGCTTATGAATGGGCTTGTGCGGAATATGCCAAAGCGGGCGCGAA GTATGGAGAAGCTGTGAAAACAAAACCAGATTTTTTTGAAGGTCTTATTGCACTTGGGCA GCAGCAGTTTGAGCAGGCCAAGCTCTGTTGGTATTATGCTCTTGCATGTAAGATAGACAT GGGAACTGAGGTTTTGGGATTATTTAACCATGCAGAGGATAATATGGAAAAGGGAATGGG GATGTGGGAGGGAATGGAAAATACACGCTTGAGGGGGCTCTCAAAACCAAGTAAGGAGAA GATCATATTTGAGAAGATGGGCATAGATGGGTACATGAAGGATATGTCTTCCGATGAAGC ATTTGAACAGGCTTCTAGTATCCGATCGCATGTAAATATTTTGTGGGGCACCATTCTTTA TGAACGTTCTGTAGTGGAATTTATCTTGGGACTTCCTAGTTGGGAGGAGTCTCTAACGGT TGCTATAGAAAAATTTAAGACTGGAGGTGCTTCTCCCGCAGACATCAATGTGATGGTAAA AAACCATTCTGCTAATGAAACTACTCAAGAAGGACTGAGTTTTAAGGTTGAAGAAATAGT TCAAGCATGGAATGAAATGTATGATGCAAAGAAGTGGAGAAATGGAGTGCCATCTTTCCG ACTTGAGCCAATATTCCGACGTAGAGCTCCAAAGTTGCATCATATGCTGGAGCATATACA CTATGCTTGACCCTCTAATATATATAAGAGGCTCTGGTTTGTCATCATGGAGAAGTTATT TCATGATTTTATCAGGTTTGTTTATTCTGGGAGCTGTACTGCACTTACTCGTCCCGCCAA AAGAAAAAAATATAAGAAAAAGAGGAAAAGAAAAGGAAATATTCTCTTCAACTTCAAGCT ACAGATTGGTTGAGAGTAGTGTGTAGGGGTTTCCTCAACTGAAAAGACAAAAAGAAAGTG CTAACAATGTGGCTTGCGTTTGCTGTTATATTTGGTGCTTCACGCAACCTTCTGCTTGAT GCTATATTTCCTTTCAAGAGATACTGTGGATATTTTGATGTTGCACTTCCTCATATTTCA GTCATGGAAGTGCTTCAAGTTGTTAGGTCATCATAGGAAATTTCTGAGGATACACTAATT GTATTTCACTTGTGTAGAAGATCACCCCAGCTGTGTTTTACACTTTTACTCCAGGTCACA CATGAAGAAAGCTGAATACAGTTCGTGTAACATGTAGCTGAAGTAGCAGGCACAGAATGC TTGTAGTCTAATTGTGTGAAACAGATGCTTTTATTGAAGAAGTTATCAGATACTAGTGAT TGTTGG