Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0288400-02
CDS Infomation	cds chromosome:IRGSP-1.0:8:11460378:11462642:1 gene:Os08g0288400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to transmembrane 9 superfamily protein member 2. (Os08t0288400-01);Nonaspanin (TM9SF) family protein. (Os08t0288400-02)
Sequence	ATGGCCATGGCGACGCCAATGGCTCCCCGCTCCACGTTCGCCATCTTCCTCATCCTCCTG CTCCGTTCCGGCCACTCTCCGGCGGCCGCGTTCTATCTCCCGGGCAGCTACCCGCACCGC TACCGCCCCGGCGAGGCGCTGGCCGCGAAGGTGAACTCCCTCACCTCGCCGTCGTCCAAG CTCCCCTTCCCCTACTACTCCCTCCCGTTCTGCGCGCCGCAGGGCGGCGTCAACCGCGCC GCCGAGAGCCTCGGCGAGCTCCTCCTCGGCGACCGCATCGAGACCTCGCCGTACCGCTTC TCCATGCTCAAGAATGCCACCGCCTTCCTCTGCCGCACCGACCCGCTTCCCCCCGCCACC GCCGACCTCCTCATGTTCCGCATCGACGACGCCTACCACGTCAACCTCCTCCTCGACACG CTCCCCGTCGTCCGGTATGTCAAGAACCTGGCCGCGCCAGGGGTGTTCGTCCGGTCTACC GGCTTCCCCGTCGGCGTGCGCGCCGACGACGGCGAGTACTACGTGTACAACCACCTCAAG CTCACCGTGCTGGTCAACAAGCCGCGGAACGGCACCACCAGGGCGGAGGCCCTGATGGCG ACCGCCGACGCCGTCGAGCTCATCAGCTTCGCCGGCGGGAGCAAGGACGGCGGCGGGTAC ACCGTCGTCGGGTTCGAGGTCGTTCCGTGCAGCGTGGAGCACGATGCGGCGGCGATCAAG GGCAAGAAGATGTACGACGAGCTGCCGGCGAGGGCGGCCGCCGGGTGCGACCCTTCGGTG GTCGGCATGCGCGTGCGGGCCAACCGGCCGCTCGTCTTCTCCTACGAGGTGGCGTTCGTG GAGAGCGGCGTCGAGTGGCCGTCGCGGTGGGACGCGTACCTGGAGATGGGCGGCGCCAAG GTGCACTGGTTCTCCATCCTCAACTCCATCGTGGTGGTGGCGTTCCTCGCCGCCATCCTG CTCGTCATCCTGCTGCGCACCGTGCGGCGCGACCTCGCGCAGTACGACGAGCACGGCGGC GAGGCGGGGTTGGCGCCGCAGGCGGACGAGCTCGCCGGGTGGAAGCTCGTCGCCGGGGAC GTGTTCCGGGAGCCCGCCCACCATCCTCTTCGCGGCGCTCGGGTTCATGTCGCCGGCGTC GCGCGGCGCGCTCGTGACGGGCATGCTCGGCATCTACCTCCTCCTCGGCTTCGCGGCGGG GTACGCCGCCGTGCGGCTCTGGAAGACGGTGCGGCACGGGGACAGCGCCGGGTGGAAGCG CGTGGCGTGGCGCGCCTCCTGCGCCTTCCCCGGCGCGGGCTTCGCCGTCTTCACCGCGCT CAACTGCGTGCTCTGGTACAACGGCAGCACGGGCGCCGTGCCGTTCCTGCTCTTCGCCGT GATCCTCCTCCTCTGGGCGTTCGTCTCCGTGCCGCTCACCCTCGCCGGCGGGCTGGTGGC ATCCCGCGTCGGGCACCTCGAGTACCCGGTGAAGACGAACAAGATCGCGAGGCAGGTGCC GGCGGCGCAGTGCTCGCCGTGGGTGTTCGTGGCGGTGGCGGGGACGCTGCCGTTCGGGAC GCTGTTCATCGAGCTGCTGTTCATCATGTCGAGCCTGTGGCTGGGGAGGGTGTACTACGT GTTCGGGTTCCTGCTGGTGGTGATGGCGCTGCTGGTGGCCGTGTGCGGCGAGGTGTCGGT GGTGCTCACCTACATGGGGCTCTGCGTGGAGGACTGGAGGTGGTGGTGGCGCGCCTTCTT CGCCTCGGGCTCCGTCGCGGCCTACACCCTCGGCTACGCCGTCTACTACCTCGTCTTCGA CCTGCACAGCCTCAGCGGCCCGGTCTCCGCCGCGCTCTACGTCGGCTACTCGCTGCTCAT GGCGCTCGCCGTCATGCTCGCCACCGGCGCCGTCGGGCTCGCCGCCTCCTTCGCCTTCGT CTACTACCTCTTCTCCGCCGTCAAGCTCGACTGATCCATGGCGTCATCGTCCGCACTGTC CACGTCATTTCATTATGTAGGTGA

Peptide Sequence

PEP ID	Os08t0288400-02
PEP Infomation	pep chromosome:IRGSP-1.0:8:11460378:11462642:1 gene:Os08g0288400 transcript:Os08t0288400-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to transmembrane 9 superfamily protein member 2. (Os08t0288400-01);Nonaspanin (TM9SF) family protein. (Os08t0288400-02)
Sequence	MAMATPMAPRSTFAIFLILLLRSGHSPAAAFYLPGSYPHRYRPGEALAAKVNSLTSPSSK LPFPYYSLPFCAPQGGVNRAAESLGELLLGDRIETSPYRFSMLKNATAFLCRTDPLPPAT ADLLMFRIDDAYHVNLLLDTLPVVRYVKNLAAPGVFVRSTGFPVGVRADDGEYYVYNHLK LTVLVNKPRNGTTRAEALMATADAVELISFAGGSKDGGGYTVVGFEVVPCSVEHDAAAIK GKKMYDELPARAAAGCDPSVVGMRVRANRPLVFSYEVAFVESGVEWPSRWDAYLEMGGAK VHWFSILNSIVVVAFLAAILLVILLRTVRRDLAQYDEHGGEAGLAPQADELAGWKLVAGD VFREPAHHPLRGARVHVAGVARRARDGHARHLPPPRLRGGVRRRAALEDGAARGQRRVEA RGVARLLRLPRRGLRRLHRAQLRALVQRQHGRRAVPALRRDPPPLGVRLRAAHPRRRAGG IPRRAPRVPGEDEQDREAGAGGAVLAVGVRGGGGDAAVRDAVHRAAVHHVEPVAGEGVLR VRVPAGGDGAAGGRVRRGVGGAHLHGALRGGLEVVVARLLRLGLRRGLHPRLRRLLPRLR PAQPQRPGLRRALRRLLAAHGARRHARHRRRRARRLLRLRLLPLLRRQARLIHGVIVRTV HVISLCR

Transcript Sequence

Transcript ID	Os08t0288400-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:11460378:11462642:1 gene:Os08g0288400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to transmembrane 9 superfamily protein member 2. (Os08t0288400-01);Nonaspanin (TM9SF) family protein. (Os08t0288400-02)
Sequence	GATCAGCTCACCTCTTCATCCTCCTGCACGCGAGAATGGCCATGGCGACGCCAATGGCTC CCCGCTCCACGTTCGCCATCTTCCTCATCCTCCTGCTCCGTTCCGGCCACTCTCCGGCGG CCGCGTTCTATCTCCCGGGCAGCTACCCGCACCGCTACCGCCCCGGCGAGGCGCTGGCCG CGAAGGTGAACTCCCTCACCTCGCCGTCGTCCAAGCTCCCCTTCCCCTACTACTCCCTCC CGTTCTGCGCGCCGCAGGGCGGCGTCAACCGCGCCGCCGAGAGCCTCGGCGAGCTCCTCC TCGGCGACCGCATCGAGACCTCGCCGTACCGCTTCTCCATGCTCAAGAATGCCACCGCCT TCCTCTGCCGCACCGACCCGCTTCCCCCCGCCACCGCCGACCTCCTCATGTTCCGCATCG ACGACGCCTACCACGTCAACCTCCTCCTCGACACGCTCCCCGTCGTCCGGTATGTCAAGA ACCTGGCCGCGCCAGGGGTGTTCGTCCGGTCTACCGGCTTCCCCGTCGGCGTGCGCGCCG ACGACGGCGAGTACTACGTGTACAACCACCTCAAGCTCACCGTGCTGGTCAACAAGCCGC GGAACGGCACCACCAGGGCGGAGGCCCTGATGGCGACCGCCGACGCCGTCGAGCTCATCA GCTTCGCCGGCGGGAGCAAGGACGGCGGCGGGTACACCGTCGTCGGGTTCGAGGTCGTTC CGTGCAGCGTGGAGCACGATGCGGCGGCGATCAAGGGCAAGAAGATGTACGACGAGCTGC CGGCGAGGGCGGCCGCCGGGTGCGACCCTTCGGTGGTCGGCATGCGCGTGCGGGCCAACC GGCCGCTCGTCTTCTCCTACGAGGTGGCGTTCGTGGAGAGCGGCGTCGAGTGGCCGTCGC GGTGGGACGCGTACCTGGAGATGGGCGGCGCCAAGGTGCACTGGTTCTCCATCCTCAACT CCATCGTGGTGGTGGCGTTCCTCGCCGCCATCCTGCTCGTCATCCTGCTGCGCACCGTGC GGCGCGACCTCGCGCAGTACGACGAGCACGGCGGCGAGGCGGGGTTGGCGCCGCAGGCGG ACGAGCTCGCCGGGTGGAAGCTCGTCGCCGGGGACGTGTTCCGGGAGCCCGCCCACCATC CTCTTCGCGGCGCTCGGGTTCATGTCGCCGGCGTCGCGCGGCGCGCTCGTGACGGGCATG CTCGGCATCTACCTCCTCCTCGGCTTCGCGGCGGGGTACGCCGCCGTGCGGCTCTGGAAG ACGGTGCGGCACGGGGACAGCGCCGGGTGGAAGCGCGTGGCGTGGCGCGCCTCCTGCGCC TTCCCCGGCGCGGGCTTCGCCGTCTTCACCGCGCTCAACTGCGTGCTCTGGTACAACGGC AGCACGGGCGCCGTGCCGTTCCTGCTCTTCGCCGTGATCCTCCTCCTCTGGGCGTTCGTC TCCGTGCCGCTCACCCTCGCCGGCGGGCTGGTGGCATCCCGCGTCGGGCACCTCGAGTAC CCGGTGAAGACGAACAAGATCGCGAGGCAGGTGCCGGCGGCGCAGTGCTCGCCGTGGGTG TTCGTGGCGGTGGCGGGGACGCTGCCGTTCGGGACGCTGTTCATCGAGCTGCTGTTCATC ATGTCGAGCCTGTGGCTGGGGAGGGTGTACTACGTGTTCGGGTTCCTGCTGGTGGTGATG GCGCTGCTGGTGGCCGTGTGCGGCGAGGTGTCGGTGGTGCTCACCTACATGGGGCTCTGC GTGGAGGACTGGAGGTGGTGGTGGCGCGCCTTCTTCGCCTCGGGCTCCGTCGCGGCCTAC ACCCTCGGCTACGCCGTCTACTACCTCGTCTTCGACCTGCACAGCCTCAGCGGCCCGGTC TCCGCCGCGCTCTACGTCGGCTACTCGCTGCTCATGGCGCTCGCCGTCATGCTCGCCACC GGCGCCGTCGGGCTCGCCGCCTCCTTCGCCTTCGTCTACTACCTCTTCTCCGCCGTCAAG CTCGACTGATCCATGGCGTCATCGTCCGCACTGTCCACGTCATTTCATTATGTAGGTGAT CTATGCGTTTTATTACTACATGATAATAAGATTATTATTTTTTGTTCCTCGTTTTGGTGT TTTCCATTTTGTACTTCATGAGTATACACCGTAGTAGTACTAGATAGAAACGAGTTTGAG TTTGGTTTAAAGGAGCACTATTACAAGATTTCACTTTGTATTT