Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0288200-01
CDS Infomation

cds chromosome:IRGSP-1.0:8:11442670:11453068:-1 gene:Os08g0288200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Adenylate kinase family protein. (Os08t0288200-01)
Sequence

GTTCACATATCAACTGGGGATCTTCTGCGGGCCGAAGTATCTTCTGGCACCGAAATAGGC
AAGAAAGCAAAAGAATATATGGACAATGGTATGCTAGTCCCGGATCAAGTTGTGACAGAT
ATGGTGGTATCACGACTATCACAACCTGATGTTAGAGAAAGAGGATGGCTTCTCGATGGT
TACCCGAGAAGTTATGCCCAGGCACAAAGTCTCGAAAGTATGAAAATACGACCAGATATA
TTCATTGTGCTGGAAGTTCCTGATGATATTCTAATCGACAGATGTGTTGGAAGAAGGTTG
GATCCTGAGACTGGCAAAATTTACCACATAAAGAACTTCCCTCCGGAGAATGATGAAGTT
TCTGCTCGTCTTGTTACACGCTCTGATGATACATTTGAGAAGGTTAAATCACGTCTTGAT
ACTTACAAACAAAATTCTGAAGCTGTTATCCCAACATACTCAGATTTGCTCAACCAGATT
GATGGAAATCGACAAGTGGAAGTCGTTTTTAATGAAATAGATTCACTGTTACAGAAGATC
TGTGAGAATGCTTCATTTAACATGTTGGCCAAAACAAATGGAAAACCACAAGATTCTAAG
GATACAACAGCCTCAAAAAATGAGTTTCGTGGGATTCCAACAAGATTAAATAACATTCCA
CATTCCAGGGAAATCAGGAAATACTTTTACAATGATGTACTAGTAGCCACCAGACATGCT
GTTGAAGACAAAAAAACTCGGTTGCAGATAGATATCAACATTCCTGAACTTAACCCTGAA
ATGGATGTTTATCGCATAGGAACCCTCATGGAACTTGTGCGAGAGCTTTCTCTTTCCTTT
GCTGATGATGGAAAGCGTGTGAAGGTTTGCGTTCAAGGCTCCATGGGACAAGGTGCATTT
GCTGGTATTCCACTTCAGCTTGCTGGAACCAGAAAAATTTTGGAAATCATGGACTGGGGT
GAATATGGGGCCAAGGGTACCTTCATTAATTTTGGAGCAGTAGGTGCTAGTGAGGTTGAT
AAAGAAGATGACATGTTCATCCTCATTGCTCCCCAAAATGCTGTTGGAAACTGTATAATT
GATGACATGAAAGCAATGACTGATGCTGCTGGTGACAGACCTGTGATTCTTGTAAATCCT
CGCTTAAAGGATATGCCTGGATCAAGTGGTGTAATGCAAACAATGGGAAGAGACATGAGG
CTAAAATATGCTGCATCTTTTGAGACTTGTTATTCCTTCCGGCTTCTCTTCTATGCTGGC
TCATTTTATCCTATTATGGGAGCTCTAAGGATGGCTTATCCTAATAAATATGAGATTTAT
CGAAGGGTTGATGAACCCAATGGACAAGAACGATATGTTCTCTTAGAGGAATTTGTGGAG
AAGCCAACTCCTGATGAAATCACCAATGCATTCAGACCACGTAAAAACGAAAATGAAAAG
TCAGCGTCTGGATTCTGGGGTTTTTTGAGTGGTATATTATGA

Peptide Sequence

PEP ID

Os08t0288200-01
PEP Infomation

pep chromosome:IRGSP-1.0:8:11442670:11453068:-1 gene:Os08g0288200 transcript:Os08t0288200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Adenylate kinase family protein. (Os08t0288200-01)
Sequence

VHISTGDLLRAEVSSGTEIGKKAKEYMDNGMLVPDQVVTDMVVSRLSQPDVRERGWLLDG
YPRSYAQAQSLESMKIRPDIFIVLEVPDDILIDRCVGRRLDPETGKIYHIKNFPPENDEV
SARLVTRSDDTFEKVKSRLDTYKQNSEAVIPTYSDLLNQIDGNRQVEVVFNEIDSLLQKI
CENASFNMLAKTNGKPQDSKDTTASKNEFRGIPTRLNNIPHSREIRKYFYNDVLVATRHA
VEDKKTRLQIDINIPELNPEMDVYRIGTLMELVRELSLSFADDGKRVKVCVQGSMGQGAF
AGIPLQLAGTRKILEIMDWGEYGAKGTFINFGAVGASEVDKEDDMFILIAPQNAVGNCII
DDMKAMTDAAGDRPVILVNPRLKDMPGSSGVMQTMGRDMRLKYAASFETCYSFRLLFYAG
SFYPIMGALRMAYPNKYEIYRRVDEPNGQERYVLLEEFVEKPTPDEITNAFRPRKNENEK
SASGFWGFLSGIL

Transcript Sequence

Transcript ID

Os08t0288200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:11442670:11453068:-1 gene:Os08g0288200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Adenylate kinase family protein. (Os08t0288200-01)
Sequence

GGTTCACATATCAACTGGGGATCTTCTGCGGGCCGAAGTATCTTCTGGCACCGAAATAGG
CAAGAAAGCAAAAGAATATATGGACAATGGTATGCTAGTCCCGGATCAAGTTGTGACAGA
TATGGTGGTATCACGACTATCACAACCTGATGTTAGAGAAAGAGGATGGCTTCTCGATGG
TTACCCGAGAAGTTATGCCCAGGCACAAAGTCTCGAAAGTATGAAAATACGACCAGATAT
ATTCATTGTGCTGGAAGTTCCTGATGATATTCTAATCGACAGATGTGTTGGAAGAAGGTT
GGATCCTGAGACTGGCAAAATTTACCACATAAAGAACTTCCCTCCGGAGAATGATGAAGT
TTCTGCTCGTCTTGTTACACGCTCTGATGATACATTTGAGAAGGTTAAATCACGTCTTGA
TACTTACAAACAAAATTCTGAAGCTGTTATCCCAACATACTCAGATTTGCTCAACCAGAT
TGATGGAAATCGACAAGTGGAAGTCGTTTTTAATGAAATAGATTCACTGTTACAGAAGAT
CTGTGAGAATGCTTCATTTAACATGTTGGCCAAAACAAATGGAAAACCACAAGATTCTAA
GGATACAACAGCCTCAAAAAATGAGTTTCGTGGGATTCCAACAAGATTAAATAACATTCC
ACATTCCAGGGAAATCAGGAAATACTTTTACAATGATGTACTAGTAGCCACCAGACATGC
TGTTGAAGACAAAAAAACTCGGTTGCAGATAGATATCAACATTCCTGAACTTAACCCTGA
AATGGATGTTTATCGCATAGGAACCCTCATGGAACTTGTGCGAGAGCTTTCTCTTTCCTT
TGCTGATGATGGAAAGCGTGTGAAGGTTTGCGTTCAAGGCTCCATGGGACAAGGTGCATT
TGCTGGTATTCCACTTCAGCTTGCTGGAACCAGAAAAATTTTGGAAATCATGGACTGGGG
TGAATATGGGGCCAAGGGTACCTTCATTAATTTTGGAGCAGTAGGTGCTAGTGAGGTTGA
TAAAGAAGATGACATGTTCATCCTCATTGCTCCCCAAAATGCTGTTGGAAACTGTATAAT
TGATGACATGAAAGCAATGACTGATGCTGCTGGTGACAGACCTGTGATTCTTGTAAATCC
TCGCTTAAAGGATATGCCTGGATCAAGTGGTGTAATGCAAACAATGGGAAGAGACATGAG
GCTAAAATATGCTGCATCTTTTGAGACTTGTTATTCCTTCCGGCTTCTCTTCTATGCTGG
CTCATTTTATCCTATTATGGGAGCTCTAAGGATGGCTTATCCTAATAAATATGAGATTTA
TCGAAGGGTTGATGAACCCAATGGACAAGAACGATATGTTCTCTTAGAGGAATTTGTGGA
GAAGCCAACTCCTGATGAAATCACCAATGCATTCAGACCACGTAAAAACGAAAATGAAAA
GTCAGCGTCTGGATTCTGGGGTTTTTTGAGTGGTATATTATGAGGCAAACATTTCAGTAA
AGGCTGAGTAAGAACAACTGAACCTTGGCCTTTTTTTTTTCTTTTTAATCGTCCATGTAA
ATATAAGCAGCCATAATGTGAAGCAAATAATTGATTCACAGGTTTAGTAAATTCTCCCAG
GCATCCAACATTCATAGAGCGAAATGCTTGTTTTCCTGTTCCTACACTCGACCATTTCTA
AATTGATGTATAGCTTCATGTACCATATTGATAAATAGTGGGCAAAATTTGCT