Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0285200-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:11263369:11266927:1 gene:Os08g0285200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsWD40-158 description:WD40 repeat-like domain containing protein. (Os08t0285200-01)
Sequence	AATGCTTCCGCTCCAGGAGCTCCAGTAGCAGCAGAAGTTGCCTGCAACAGCCGGGCCCAC CACCGCCTCCTTCCCCCAACCAGCGTGAGCCCACCACCGCCCATTGCCGCCGCGACAATG GCGTCGCCGCCGGAGCCGGAGCCGGACGCCGGCGGCCTCACCGACTACGAGCGCCGCCGT GCGGAGAACATCCGGCGCAACGGCGTCATCCTCGACTCCCTCCGCCGCAAGGCCGCCGAG CTCTCCGCCATCATCCAGCTCTCGCGCCCCCCCACCAAGAAGCAGCAGCCCCGCGCGCGC CCCCGCGCCGCGCCCGCCGTCGTGCGCCGCTCCCTCCGCACGCAGGGCCTTCCTCCACCT CCCGCCTCCGGGCCAGCGCCAGCGCCACCTCGCCGCAGCACCCGGATCACCCCGTCCCTC GCCTCCGCCATCCTCGACGCCACCTCTCCCCCCGCGTCCGAGGCCAAGGTCCGCGACGAC GGCTTCGACGCCAGGACGGAGCTGGTGCTGAGGCCCTCCAACGTGAGGAGGCTCGTGTCG GCGGACAGGATACCGTCGTTGCGGATCCTGCCGCTGGTGGACCGGACCGTGGTGGCGGCG GGGAGCAATGTCGGGCATGTTGGGTTCTGGGTCGTCGATGACGATGGTGACGACGCACAC AGGGTGTTCGAGTATATGCCTCACCTGAGCTCTGTGGGAGCAATCGTTGCACACGCAGCC AAGCCGCACAAGATTTACAGCTGTAGTCACGGAGGTGAAATATGTCTTATGGACCTTGAG AGAGAGAACTTTAATATTACCCGGCTGTCCGAATTTCCTATTTTGTCACTTTGTCAAGCG CCAAATAGCCCCAGCTGTCTATATTTTGGTGAAGAAACAGATGTGAAACTTTTTGATGAT AGGATTGGTAAGGTGTCAACCTCATGGAATGCACATGCTAGCAGAATCAACTCAATAGAT TTTCATCCAGAGAACACATATATGTTGGCCACAAGTTCAAGAGATGGAACTGCTTGTATG TGGGATTTGAGAACCATGAAAAAGAAGGGAGCGGAGAGCTTGGTGGTTCTTGAACATGAC AGAGGTCTTCAGTCAGCTTATTTTTCACCAAGCGGACATATGGTTGCAACTACAAGCTTA GATGGTATTGTCCGAGTTTTTAGTGTGGATAACTTCGAAAACTTTCATACAGTGGAGCGA AATAACAATATCGGCACACATCTTTCTACATTCAAGGCAATCTGGGGCTGGAATGACATG GACTTGTTTATTGGAAATGCGACACGTGCAATAGATGTTATCTCAGTTGACCTGAATGAC AGTAGCATCTCAACTACGAACAACGCATGTCTCAAGAGCGAACACATGGTTTCCATCCCA TACCGATTTTCTGCGCACCCATGTAAAGTTGGTCACCTTGCTTGTTCAAGCTCCAGCGGC AAGGTGTTTCTTTGGACCAGAGCATGA

Peptide Sequence

PEP ID	Os08t0285200-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:11263369:11266927:1 gene:Os08g0285200 transcript:Os08t0285200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsWD40-158 description:WD40 repeat-like domain containing protein. (Os08t0285200-01)
Sequence	NASAPGAPVAAEVACNSRAHHRLLPPTSVSPPPPIAAATMASPPEPEPDAGGLTDYERRR AENIRRNGVILDSLRRKAAELSAIIQLSRPPTKKQQPRARPRAAPAVVRRSLRTQGLPPP PASGPAPAPPRRSTRITPSLASAILDATSPPASEAKVRDDGFDARTELVLRPSNVRRLVS ADRIPSLRILPLVDRTVVAAGSNVGHVGFWVVDDDGDDAHRVFEYMPHLSSVGAIVAHAA KPHKIYSCSHGGEICLMDLERENFNITRLSEFPILSLCQAPNSPSCLYFGEETDVKLFDD RIGKVSTSWNAHASRINSIDFHPENTYMLATSSRDGTACMWDLRTMKKKGAESLVVLEHD RGLQSAYFSPSGHMVATTSLDGIVRVFSVDNFENFHTVERNNNIGTHLSTFKAIWGWNDM DLFIGNATRAIDVISVDLNDSSISTTNNACLKSEHMVSIPYRFSAHPCKVGHLACSSSSG KVFLWTRA

Transcript Sequence

Transcript ID	Os08t0285200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:11263369:11266927:1 gene:Os08g0285200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsWD40-158 description:WD40 repeat-like domain containing protein. (Os08t0285200-01)
Sequence	AATGCTTCCGCTCCAGGAGCTCCAGTAGCAGCAGAAGTTGCCTGCAACAGCCGGGCCCAC CACCGCCTCCTTCCCCCAACCAGCGTGAGCCCACCACCGCCCATTGCCGCCGCGACAATG GCGTCGCCGCCGGAGCCGGAGCCGGACGCCGGCGGCCTCACCGACTACGAGCGCCGCCGT GCGGAGAACATCCGGCGCAACGGCGTCATCCTCGACTCCCTCCGCCGCAAGGCCGCCGAG CTCTCCGCCATCATCCAGCTCTCGCGCCCCCCCACCAAGAAGCAGCAGCCCCGCGCGCGC CCCCGCGCCGCGCCCGCCGTCGTGCGCCGCTCCCTCCGCACGCAGGGCCTTCCTCCACCT CCCGCCTCCGGGCCAGCGCCAGCGCCACCTCGCCGCAGCACCCGGATCACCCCGTCCCTC GCCTCCGCCATCCTCGACGCCACCTCTCCCCCCGCGTCCGAGGCCAAGGTCCGCGACGAC GGCTTCGACGCCAGGACGGAGCTGGTGCTGAGGCCCTCCAACGTGAGGAGGCTCGTGTCG GCGGACAGGATACCGTCGTTGCGGATCCTGCCGCTGGTGGACCGGACCGTGGTGGCGGCG GGGAGCAATGTCGGGCATGTTGGGTTCTGGGTCGTCGATGACGATGGTGACGACGCACAC AGGGTGTTCGAGTATATGCCTCACCTGAGCTCTGTGGGAGCAATCGTTGCACACGCAGCC AAGCCGCACAAGATTTACAGCTGTAGTCACGGAGGTGAAATATGTCTTATGGACCTTGAG AGAGAGAACTTTAATATTACCCGGCTGTCCGAATTTCCTATTTTGTCACTTTGTCAAGCG CCAAATAGCCCCAGCTGTCTATATTTTGGTGAAGAAACAGATGTGAAACTTTTTGATGAT AGGATTGGTAAGGTGTCAACCTCATGGAATGCACATGCTAGCAGAATCAACTCAATAGAT TTTCATCCAGAGAACACATATATGTTGGCCACAAGTTCAAGAGATGGAACTGCTTGTATG TGGGATTTGAGAACCATGAAAAAGAAGGGAGCGGAGAGCTTGGTGGTTCTTGAACATGAC AGAGGTCTTCAGTCAGCTTATTTTTCACCAAGCGGACATATGGTTGCAACTACAAGCTTA GATGGTATTGTCCGAGTTTTTAGTGTGGATAACTTCGAAAACTTTCATACAGTGGAGCGA AATAACAATATCGGCACACATCTTTCTACATTCAAGGCAATCTGGGGCTGGAATGACATG GACTTGTTTATTGGAAATGCGACACGTGCAATAGATGTTATCTCAGTTGACCTGAATGAC AGTAGCATCTCAACTACGAACAACGCATGTCTCAAGAGCGAACACATGGTTTCCATCCCA TACCGATTTTCTGCGCACCCATGTAAAGTTGGTCACCTTGCTTGTTCAAGCTCCAGCGGC AAGGTGTTTCTTTGGACCAGAGCATGAACCAACAAGGCTTCAAATGACTGATTCTTTTGA CTCAACTTTTGGTAAGGTGTTAATTTTGATGGTTGCAACACCTAAGTCTTGTTTCATACT CCCCAAGGCATGAACAGATGACTGATATATTTAGATGGAAGAGGATCCTCTAAACTTCCC ATGGTAAAGCTAAGTTAGAGAAGCATAGTGCTGTGATTTTTGGGCACATATCAGTCATCT CATCTGATATGAGATGGATGGTTCTAGATTCTCCTTACAGTGCTATGCTACAGTGAAAAC ACTAACTTTTGTGTGCTACAGTGAGTCGGCATAGAACCCAACACTGTGCGCTACCATGCT CCTCTGACAGTTACTTCACAACATCAGAGGAACCGGATCCATTTAGATGGTGTACATACA ACTCGTATAATGGGTTATATCTCTAGTTATTGCAATATATTTGCACTGTC