Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0282000-01
CDS Infomation

cds chromosome:IRGSP-1.0:8:11055447:11062439:-1 gene:Os08g0282000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetraspanin domain containing protein. (Os08t0282000-01)
Sequence

ATGGCGTGCCGGGGCTTCTTCGAATGCCTACTGAAGCTGCTCAACTTTGTCCTCACGGTC
GCCGGCCTCGCCATGGTCGGATATGGGATTTACCTGCTCGTCGAGTGGATGAGGATTTCC
GGCGGCGGCGGCGGGGCACCACCGTCGCCAGCGCCGCCTGCTGAGTTGCTTATGTTTGGC
CGCCCGATGCTCACGGCTGTTGCCCTAGGTGACGGTGGCAGTTTCTTCGACAAGCTCCCT
AAAGCATGGTTCATCTATTTGTTCATTGGTGTTGGTGCAATTATCTTTGTGATCTCTCTG
TTTGGTTGCATTGGAGCTGCAACAAGGAACACCTGCTGCTTGTGTTGTTACGCTTTCTTG
GTCATATTGTTGATCCTTGTTGAGGCTGGAGCTGCTGCATTCATATTCTTCGACGAAAGC
TGGAAAGACGTAATTCCGGTGGACAAGACTGAGAATTTTGATGTAATGTATGACTTTCTC
AAGGAAAACTGGGAGATTGCAAGATGGGTTGCTCTTGGTAGTGTCATTTTCGAGGTATTG
CTTTTCCTTTTAGCACTGGTTGTCAGGGCAATGAACAAACCTGCTGAATATGACAGCGAT
GATGAGATCATCGCAACTTCTAGAAGCACTAGCATCCGGCAGCCACTAATTCATTCACAA
AATGTTCCTGCTACTGGTGTTCCTGTTGCAACCCTTGAGCAACGCGCTAGCAGAAACGAT
GCATGGAGCCAGAGGATGCGTGAGAAGTATGGTCTGGACACAAGCCAGTTCACCTATAAT
CCGTCAGACCCAAGCAGATATCAGCAAAATGGTGCCCCTCCAGCTGAAGAAAGGAACCGC
TGTGTTATACTGTGA

Peptide Sequence

PEP ID

Os08t0282000-01
PEP Infomation

pep chromosome:IRGSP-1.0:8:11055447:11062439:-1 gene:Os08g0282000 transcript:Os08t0282000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetraspanin domain containing protein. (Os08t0282000-01)
Sequence

MACRGFFECLLKLLNFVLTVAGLAMVGYGIYLLVEWMRISGGGGGAPPSPAPPAELLMFG
RPMLTAVALGDGGSFFDKLPKAWFIYLFIGVGAIIFVISLFGCIGAATRNTCCLCCYAFL
VILLILVEAGAAAFIFFDESWKDVIPVDKTENFDVMYDFLKENWEIARWVALGSVIFEVL
LFLLALVVRAMNKPAEYDSDDEIIATSRSTSIRQPLIHSQNVPATGVPVATLEQRASRND
AWSQRMREKYGLDTSQFTYNPSDPSRYQQNGAPPAEERNRCVIL

Transcript Sequence

Transcript ID

Os08t0282000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:11055447:11062439:-1 gene:Os08g0282000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetraspanin domain containing protein. (Os08t0282000-01)
Sequence

AATCGATCTCTCCCCGTCCATCCCCTCGATCGCCCTCGACCCCCCTCGCCCGCCGCCTCC
GCCGATCCCCATCCGTCGAGCACCGCCGCCGCCGCCGCCGCCGCCGCCGGCGTCCCGCCA
CATCCCCGCCTTGCTGCCCGATTATATCATTATTACACCTTGCTGCGGCTTTTATTGATT
CGTGAATCGTGATGGCGTGCCGGGGCTTCTTCGAATGCCTACTGAAGCTGCTCAACTTTG
TCCTCACGGTCGCCGGCCTCGCCATGGTCGGATATGGGATTTACCTGCTCGTCGAGTGGA
TGAGGATTTCCGGCGGCGGCGGCGGGGCACCACCGTCGCCAGCGCCGCCTGCTGAGTTGC
TTATGTTTGGCCGCCCGATGCTCACGGCTGTTGCCCTAGGTGACGGTGGCAGTTTCTTCG
ACAAGCTCCCTAAAGCATGGTTCATCTATTTGTTCATTGGTGTTGGTGCAATTATCTTTG
TGATCTCTCTGTTTGGTTGCATTGGAGCTGCAACAAGGAACACCTGCTGCTTGTGTTGTT
ACGCTTTCTTGGTCATATTGTTGATCCTTGTTGAGGCTGGAGCTGCTGCATTCATATTCT
TCGACGAAAGCTGGAAAGACGTAATTCCGGTGGACAAGACTGAGAATTTTGATGTAATGT
ATGACTTTCTCAAGGAAAACTGGGAGATTGCAAGATGGGTTGCTCTTGGTAGTGTCATTT
TCGAGGTATTGCTTTTCCTTTTAGCACTGGTTGTCAGGGCAATGAACAAACCTGCTGAAT
ATGACAGCGATGATGAGATCATCGCAACTTCTAGAAGCACTAGCATCCGGCAGCCACTAA
TTCATTCACAAAATGTTCCTGCTACTGGTGTTCCTGTTGCAACCCTTGAGCAACGCGCTA
GCAGAAACGATGCATGGAGCCAGAGGATGCGTGAGAAGTATGGTCTGGACACAAGCCAGT
TCACCTATAATCCGTCAGACCCAAGCAGATATCAGCAAAATGGTGCCCCTCCAGCTGAAG
AAAGGAACCGCTGTGTTATACTGTGAAAAATTACTCCATGACGTACTCCGGTATGGTGTT
TTTTTCATGGGCAGGCTTGTGCAGTTGGTTGCACCGAGTAATTAATTATTCAGAGTGTCG
TGTGTAAAGAGGGCTATTGCATTGTCGTTTTGACATATTGATGTGTTCTCTGAATGTTCT
ATGCACCGGTAAATCTTCTCATGTGGAGAAGCTGCTATTAGATACGCCATTTTATTTGCC
TGTTTTTGGGTGTATCTTTTCGTATTTTTCTCTCGACTAGCTTTCATCCTCAATTCCTCA
TTGTACAGCCGTTGTATTCAGTTTGGCGTTATAATCATGTTTGTGGTGGTTGGTTTGTGC
TATG