Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0280200-02
CDS Infomation	cds chromosome:IRGSP-1.0:8:10925223:10932864:1 gene:Os08g0280200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tensin phosphatase, C2 domain domain containing protein. (Os08t0280200-01);Similar to Formin-like protein 6. (Os08t0280200-02);Hypothetical conserved gene. (Os08t0280200-03)
Sequence	ATGATTTCTCTAGTTCATGAGGAGATAACACAGGTAGTTGACATCAATACTGGTTGCCTA TCTTCATTGGATATGACAGTTCCTTCCACCATGAACTCTAGCAGACCAGTTCTAATCGAC CAAAATTCTAAGCTTGATGATCAGTTTGGTTCACTACAGAGCTCTTCACCCACAATGATT ATGTCGCAGCAGTTTCCAGTTTCTAGGTCAAGTTCTGTCCTTTCCAGTGACTTTAGTCCT AGATTACTTTCAGCCTGCCCAAGATTTCACAGTGCACCTTCTGCCCTTGGAATTACGGCT CTGTTGGAAGACCATGCTGCATTTGGAGACACTAAGAATTCTGTCAAAGTTTCAAGTGCC GTGGTCAAAATTCCATCAAAACAGTCATCACAACAGCATCCAATAACAGTTACTCCTGTT GTAACGAAGTGTACACCATCACCACCACCACTGCTTCCTCCACTGGCTCCGGTGGTGCCA GTACCATCTGATGATCAAATGATATCCCAGGAAAAAGACATGTCTCAACAGGCTCAAAAG CATCCAGACCTTTCATCATTTCCATCCCTATCTCCTACTCAACAAAAACAATCCACATCA AAATTATGTCAAACTATTCTGCCCACAAATCATCAACTGTCCTCAAGTAACATTACGAAA GAGCCACTACAAATTTCTCCTGCTCCCACTCCACCTCCATTGCCTACTCCATCAACTTCC AGTTCTAGTAGTTGTCATTGTCTCCCTCCAGATTCCATGCTTTCCACCACAACAGCTTTG TTCAGACCTCCAGCACCGCCGCCACCACCACTTCAATCTCCATCCACTCCTAGATGCTCT CCTGTTAGAACTCTTGCATCACCTCCACCTCCTCCTGCCCCTACTTCATCGCCTGTTAGA ATGTCAGGGCCTCCTCCCCCACCTCCTCCACCTGCACCAAACTCGTGTCCCAGTAGACCT GCACCACCTCCACCTCCACCTCCACCACTTGCTTCAACTTCATCTCCTCCCCGACCTGCC GCACCATCACCGTGTCAACTACATACTTCAACTTCATCTCCTGCACGACCAGTTCCACCA CCTCCACCAACATTATCTACAATTAGATCTTCAGCGCCAACACCACCTCTACTGCCTGGA GCTACTTCTGCACCATCCCCACCACCACCACCACCCCCCTGTAGTTCATCAAATCAACTG TCTGCTCCGCCACCGCCTCCTCCAAGCTTCTCAAAGAACAATGGCAGTATTGCGCCTCCG CCAGCACCTCCTGGTGGTAATGCTAAATTGCCTGGTATGAGGGGGCGTGGACCTGCACCT CCTTCAGGTCCAATGTCTAGGAGCCTTCAATCTGGTCAGGCTGCATCCAGAAGGTCCAAC TTGAAGCCCCTACACTGGGTTAAAGTAACAAGAGCAATGCAGGGAAGTCTCTGGGAGGAG TCACAGAAAACTGACGAAGCTTCAAAACCTCCAGTGTTTGACATGTCAGAACTAGAACAT CTTTTCTCAGCTGTCCTGCCAAGTTCAGATGGGAAGCGTTCAGATAAGTCAGGAAGTCGT GCATCTGGATCAAAACCAGAAAAGATTCACCTTATTGACCTTCGCCGAGCTAATAATTGC GGAATCATGCTAACAAAAGTCAAAATGCCCTTGCCTGACCTAATGAGCGCAATTCTTACT TTGGATGATACTATCCTAGATGCTGATCAGGTGGAAAACCTTATTAAGTTCACTCCAACT AAAGAGGAAGCAGAACTTCTGAAGGGTTACAAAGGAGATAAGCAAGTACTTGGAGAATGT GAGCAGTTCTTCATGGAGCTTATGAAATTACCCCGTGTGGATTCTAAGCTGAGAGTTTTC TTATTTAAGATTCAATTCCCTTCTCAGGTTTCTGACCTTAAGAGGAGCCTGAACATTGTC AACTCTTCCGCGGAAGAGATAAGGGGTTCAGCTAAGCTGAAAAGGATTATGCAGACAATT CTTTCACTGGGAAATGCGTTAAACCAAGGAACTGCTAGAGGTTCTGCTGTTGGGTTCAGG TTGGATAGCTTACTCAAACTAAGTGACACTCGTGCACGTAACAATAAGATGACTTTAATG CATTATTTATCCAAGGTGCTTTCTGAGAAACTTCCAGAACTTCTTGATTTTCCTAAAGAT CTCGCTAGCTTGGAGTTGGCAGCAAAGGTACAATTGAAGTCATTAGCAGAGGAAATGCAG GCCATAAACAAAGGACTCGAAAAAGTCGAGCAAGAACTAACTACATCAGAAAATGATGGC CCTGTGTCAGAGATATTCCGCAAGACACTGAAGGATTTTCTAAGTGGTGCTGAAGCTGAA GTTAGATCCTTGACCTCACTATATTCTAATGTGGGAAGAAATGCTGATGCATTAGCACTT TATTTTGGAGAAGACCCAGCACGTTGTCCATTTGAGCAAGTGGTCATTACACTCCAAAAC TTTGTGAGATTGTTCGTACGTTCCCATGATGAGAACTGCAAACAATTGGATCTAGAAAAG AAGAAAGCACTGAAGGAAGCAGAAGCAGAGAAAACCAAGAAGGAGCCAGAAAACGCACAG AAAACTAAGGAACCAGGAAATGACAAAGCTAAGCACAACAATTCAATCAAAGAGTTGGAT ATCTCACTCCAATCACCAGCGCAAACTGCCAGTGCCAAATGA

Peptide Sequence

PEP ID	Os08t0280200-02
PEP Infomation	pep chromosome:IRGSP-1.0:8:10925223:10932864:1 gene:Os08g0280200 transcript:Os08t0280200-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tensin phosphatase, C2 domain domain containing protein. (Os08t0280200-01);Similar to Formin-like protein 6. (Os08t0280200-02);Hypothetical conserved gene. (Os08t0280200-03)
Sequence	MISLVHEEITQVVDINTGCLSSLDMTVPSTMNSSRPVLIDQNSKLDDQFGSLQSSSPTMI MSQQFPVSRSSSVLSSDFSPRLLSACPRFHSAPSALGITALLEDHAAFGDTKNSVKVSSA VVKIPSKQSSQQHPITVTPVVTKCTPSPPPLLPPLAPVVPVPSDDQMISQEKDMSQQAQK HPDLSSFPSLSPTQQKQSTSKLCQTILPTNHQLSSSNITKEPLQISPAPTPPPLPTPSTS SSSSCHCLPPDSMLSTTTALFRPPAPPPPPLQSPSTPRCSPVRTLASPPPPPAPTSSPVR MSGPPPPPPPPAPNSCPSRPAPPPPPPPPLASTSSPPRPAAPSPCQLHTSTSSPARPVPP PPPTLSTIRSSAPTPPLLPGATSAPSPPPPPPPCSSSNQLSAPPPPPPSFSKNNGSIAPP PAPPGGNAKLPGMRGRGPAPPSGPMSRSLQSGQAASRRSNLKPLHWVKVTRAMQGSLWEE SQKTDEASKPPVFDMSELEHLFSAVLPSSDGKRSDKSGSRASGSKPEKIHLIDLRRANNC GIMLTKVKMPLPDLMSAILTLDDTILDADQVENLIKFTPTKEEAELLKGYKGDKQVLGEC EQFFMELMKLPRVDSKLRVFLFKIQFPSQVSDLKRSLNIVNSSAEEIRGSAKLKRIMQTI LSLGNALNQGTARGSAVGFRLDSLLKLSDTRARNNKMTLMHYLSKVLSEKLPELLDFPKD LASLELAAKVQLKSLAEEMQAINKGLEKVEQELTTSENDGPVSEIFRKTLKDFLSGAEAE VRSLTSLYSNVGRNADALALYFGEDPARCPFEQVVITLQNFVRLFVRSHDENCKQLDLEK KKALKEAEAEKTKKEPENAQKTKEPGNDKAKHNNSIKELDISLQSPAQTASAK

Transcript Sequence

Transcript ID	Os08t0280200-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:10925223:10932864:1 gene:Os08g0280200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tensin phosphatase, C2 domain domain containing protein. (Os08t0280200-01);Similar to Formin-like protein 6. (Os08t0280200-02);Hypothetical conserved gene. (Os08t0280200-03)
Sequence	TCCCACAGAAACAAGCCACCATTCCTGATGAAAAATCAGGGTCGTCTGTCATCCATGAGA AGATGATTTCTCTAGTTCATGAGGAGATAACACAGGTAGTTGACATCAATACTGGTTGCC TATCTTCATTGGATATGACAGTTCCTTCCACCATGAACTCTAGCAGACCAGTTCTAATCG ACCAAAATTCTAAGCTTGATGATCAGTTTGGTTCACTACAGAGCTCTTCACCCACAATGA TTATGTCGCAGCAGTTTCCAGTTTCTAGGTCAAGTTCTGTCCTTTCCAGTGACTTTAGTC CTAGATTACTTTCAGCCTGCCCAAGATTTCACAGTGCACCTTCTGCCCTTGGAATTACGG CTCTGTTGGAAGACCATGCTGCATTTGGAGACACTAAGAATTCTGTCAAAGTTTCAAGTG CCGTGGTCAAAATTCCATCAAAACAGTCATCACAACAGCATCCAATAACAGTTACTCCTG TTGTAACGAAGTGTACACCATCACCACCACCACTGCTTCCTCCACTGGCTCCGGTGGTGC CAGTACCATCTGATGATCAAATGATATCCCAGGAAAAAGACATGTCTCAACAGGCTCAAA AGCATCCAGACCTTTCATCATTTCCATCCCTATCTCCTACTCAACAAAAACAATCCACAT CAAAATTATGTCAAACTATTCTGCCCACAAATCATCAACTGTCCTCAAGTAACATTACGA AAGAGCCACTACAAATTTCTCCTGCTCCCACTCCACCTCCATTGCCTACTCCATCAACTT CCAGTTCTAGTAGTTGTCATTGTCTCCCTCCAGATTCCATGCTTTCCACCACAACAGCTT TGTTCAGACCTCCAGCACCGCCGCCACCACCACTTCAATCTCCATCCACTCCTAGATGCT CTCCTGTTAGAACTCTTGCATCACCTCCACCTCCTCCTGCCCCTACTTCATCGCCTGTTA GAATGTCAGGGCCTCCTCCCCCACCTCCTCCACCTGCACCAAACTCGTGTCCCAGTAGAC CTGCACCACCTCCACCTCCACCTCCACCACTTGCTTCAACTTCATCTCCTCCCCGACCTG CCGCACCATCACCGTGTCAACTACATACTTCAACTTCATCTCCTGCACGACCAGTTCCAC CACCTCCACCAACATTATCTACAATTAGATCTTCAGCGCCAACACCACCTCTACTGCCTG GAGCTACTTCTGCACCATCCCCACCACCACCACCACCCCCCTGTAGTTCATCAAATCAAC TGTCTGCTCCGCCACCGCCTCCTCCAAGCTTCTCAAAGAACAATGGCAGTATTGCGCCTC CGCCAGCACCTCCTGGTGGTAATGCTAAATTGCCTGGTATGAGGGGGCGTGGACCTGCAC CTCCTTCAGGTCCAATGTCTAGGAGCCTTCAATCTGGTCAGGCTGCATCCAGAAGGTCCA ACTTGAAGCCCCTACACTGGGTTAAAGTAACAAGAGCAATGCAGGGAAGTCTCTGGGAGG AGTCACAGAAAACTGACGAAGCTTCAAAACCTCCAGTGTTTGACATGTCAGAACTAGAAC ATCTTTTCTCAGCTGTCCTGCCAAGTTCAGATGGGAAGCGTTCAGATAAGTCAGGAAGTC GTGCATCTGGATCAAAACCAGAAAAGATTCACCTTATTGACCTTCGCCGAGCTAATAATT GCGGAATCATGCTAACAAAAGTCAAAATGCCCTTGCCTGACCTAATGAGCGCAATTCTTA CTTTGGATGATACTATCCTAGATGCTGATCAGGTGGAAAACCTTATTAAGTTCACTCCAA CTAAAGAGGAAGCAGAACTTCTGAAGGGTTACAAAGGAGATAAGCAAGTACTTGGAGAAT GTGAGCAGTTCTTCATGGAGCTTATGAAATTACCCCGTGTGGATTCTAAGCTGAGAGTTT TCTTATTTAAGATTCAATTCCCTTCTCAGGTTTCTGACCTTAAGAGGAGCCTGAACATTG TCAACTCTTCCGCGGAAGAGATAAGGGGTTCAGCTAAGCTGAAAAGGATTATGCAGACAA TTCTTTCACTGGGAAATGCGTTAAACCAAGGAACTGCTAGAGGTTCTGCTGTTGGGTTCA GGTTGGATAGCTTACTCAAACTAAGTGACACTCGTGCACGTAACAATAAGATGACTTTAA TGCATTATTTATCCAAGGTGCTTTCTGAGAAACTTCCAGAACTTCTTGATTTTCCTAAAG ATCTCGCTAGCTTGGAGTTGGCAGCAAAGGTACAATTGAAGTCATTAGCAGAGGAAATGC AGGCCATAAACAAAGGACTCGAAAAAGTCGAGCAAGAACTAACTACATCAGAAAATGATG GCCCTGTGTCAGAGATATTCCGCAAGACACTGAAGGATTTTCTAAGTGGTGCTGAAGCTG AAGTTAGATCCTTGACCTCACTATATTCTAATGTGGGAAGAAATGCTGATGCATTAGCAC TTTATTTTGGAGAAGACCCAGCACGTTGTCCATTTGAGCAAGTGGTCATTACACTCCAAA ACTTTGTGAGATTGTTCGTACGTTCCCATGATGAGAACTGCAAACAATTGGATCTAGAAA AGAAGAAAGCACTGAAGGAAGCAGAAGCAGAGAAAACCAAGAAGGAGCCAGAAAACGCAC AGAAAACTAAGGAACCAGGAAATGACAAAGCTAAGCACAACAATTCAATCAAAGAGTTGG ATATCTCACTCCAATCACCAGCGCAAACTGCCAGTGCCAAATGATATAACTTCTCTTGAC AGATGAGCCAAACAACACTAGCTTTGCCAATAAAGGAAACCTGTTCATGGTGCCTGCTCC TATCAGTCACCCTCTCTAGCTGATGTCAGCTGGATATGTTGCGCTGGATGATGGATTGAA GTGAACCAGCTGTGGCAAGAAAGTCGCAAAGTGAATGGCCCATTCAGCATTCTGTCCTCT GCAGTTATTCATCTAACAGAGCGATTGATACTTAAGAAATGTTCCTGGAGACAAGCTGTA CAGTTCTAACAAAATAATAGAAATGATCAGAAGCACATTTACAATTTTGTTTATTTGTTC CAATCATATGTAGGTAATGTTCGTTCTAACAGAAGAATAAAATTTATCAGTAGAATCGTG TTTAGGGGGACTAGCCTGTAGGTTTTGTTGTAAAAGGAAAAAACAAATAATGGCTGATTG TATTGTATTTCT