Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0277900-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:10759593:10763435:1 gene:Os08g0277900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Syntaxin 52 (AtSYP52). (Os08t0277900-01)
Sequence	ATGGCTTCATCTTCGGACCCATGGATGAAAGAGTACAATGAGGCATCTAGGCTTGCTGAT GATATCAATTCCATGATTGCCGATAGAGGGTCTCTTCCACAATCAGGCCCGGAAATTATA CGTCACACATCAGCCATTCGAAGAAAAATAACTATTCTTTGTACTAGACTGGATAGCTTG GAAGCATTGTTGTCCAAGATTCCTCCGAAGTCACTCAGTGACAAGGAGTTACACAAGCGC CAAGACACGCTTTCCAATTTGAAATCTAAAACAAAACAGATGGCAACAAGTTTTAACATG TCAAACTTTGCCAACAGGGAGGACTTGCTTGGTCAGAACAAGAAGGCAGCTGATGATATG AGCAGAGTTGCTGGTTTGGATAACCAAGGGATTGTTGGCCTTCAGAGGCAAATTATGAAA GAACAAGATGAAGGTCTTGAGAAGCTGGAAGAGACAGTCCTGAGTACAAAACATATCGCT TTAGCAGTCAATGAAGAACTTACCCTGCATACGAGATTGATTGATGACTTGGAAGATCAT GTTGATGTTACAAACTCGCGTCTTCAGCGTGTGCAAAAGAGGCTTGCAATTCTGAACAAG CGCACCAAAGGTGGCTGCTCATGCATGTGCCTGCTGCTATCTGTCGTCGCAATAGTGATC CTTGCTGTTATCGTGTGGCTTCTTATCAAGTATATGTAA

Peptide Sequence

PEP ID	Os08t0277900-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:10759593:10763435:1 gene:Os08g0277900 transcript:Os08t0277900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Syntaxin 52 (AtSYP52). (Os08t0277900-01)
Sequence	MASSSDPWMKEYNEASRLADDINSMIADRGSLPQSGPEIIRHTSAIRRKITILCTRLDSL EALLSKIPPKSLSDKELHKRQDTLSNLKSKTKQMATSFNMSNFANREDLLGQNKKAADDM SRVAGLDNQGIVGLQRQIMKEQDEGLEKLEETVLSTKHIALAVNEELTLHTRLIDDLEDH VDVTNSRLQRVQKRLAILNKRTKGGCSCMCLLLSVVAIVILAVIVWLLIKYM

Transcript Sequence

Transcript ID	Os08t0277900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:10759593:10763435:1 gene:Os08g0277900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Syntaxin 52 (AtSYP52). (Os08t0277900-01)
Sequence	TTCCTGAATCTTCCTACCGTGCGTGAGCCGTCCCCAGTACCAGTACTCACCACCTACGCG GTCGCCCACCGCGCCGTCGCCGGCGCCGGTCAGCCCCTCACCGCCGCCTCCCGTTCGCCA ACGACGTCGTCGCCGTCGGCCCTATCCCCCGTCAGCTCCGTCAAAGGCACGGAGAAACGA ACAAACGCGAGAGAGAAAACAAGAAGAGGAGGAGGAGCCGACGCAACCGAGGCCCCAGTT CCGATTGATCTCCGGTTCCCAGATCGGCCAGCAATGGCTTCATCTTCGGACCCATGGATG AAAGAGTACAATGAGGCATCTAGGCTTGCTGATGATATCAATTCCATGATTGCCGATAGA GGGTCTCTTCCACAATCAGGCCCGGAAATTATACGTCACACATCAGCCATTCGAAGAAAA ATAACTATTCTTTGTACTAGACTGGATAGCTTGGAAGCATTGTTGTCCAAGATTCCTCCG AAGTCACTCAGTGACAAGGAGTTACACAAGCGCCAAGACACGCTTTCCAATTTGAAATCT AAAACAAAACAGATGGCAACAAGTTTTAACATGTCAAACTTTGCCAACAGGGAGGACTTG CTTGGTCAGAACAAGAAGGCAGCTGATGATATGAGCAGAGTTGCTGGTTTGGATAACCAA GGGATTGTTGGCCTTCAGAGGCAAATTATGAAAGAACAAGATGAAGGTCTTGAGAAGCTG GAAGAGACAGTCCTGAGTACAAAACATATCGCTTTAGCAGTCAATGAAGAACTTACCCTG CATACGAGATTGATTGATGACTTGGAAGATCATGTTGATGTTACAAACTCGCGTCTTCAG CGTGTGCAAAAGAGGCTTGCAATTCTGAACAAGCGCACCAAAGGTGGCTGCTCATGCATG TGCCTGCTGCTATCTGTCGTCGCAATAGTGATCCTTGCTGTTATCGTGTGGCTTCTTATC AAGTATATGTAAAATGGATCCATGACGTTTGTTCAACGCATCACTTCTGCGCTACTCATC AAAATGTGCAGCCTTTTAAAGATGTACCATGGTTTTCATCTCGGCTTTGTTCTCCTGGGT GGAATGGTTTTATCAGTGTGTGTACGTCATATGAGGCCCTGGCATATATGCCCAACAATA TGTCTGAGACTACCACTCACGTGGAATTTGTTGGATTGCAATGAGAAGTATATATATGTT TTTGTGTGTG