Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0270800-02
CDS Infomation

cds chromosome:IRGSP-1.0:8:10367301:10369143:1 gene:Os08g0270800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os08t0270800-01);Similar to cDNA clone:J013075I05, full insert sequence. (Os08t0270800-02)
Sequence

ATGAAGAAGGCTAAGGTGGTGTTGGCTCAGCCGGCGGCGAGGGCGCCGCCGTCGCCGCTG
CTGCCGAGGGCGCCGGGGCACAGCCGTGGCGGCGGCGTTGGTGGCGGGGAAGAGGCGTAC
AGGGCGAGGGCCAAGTACAAGAATCTTCTCCAGGACTACAAGGAGCTCCTCGAGGAAACT
GAAGCAAAGAAGAAGAGATTACAGATGGAGAAGCTCAAGAAACAGAGGCTTTTGGCTGAA
GTCAAGTTTTTGCGGAAAAGGTACAAATCCATGTCCGAAAATCCATCCCAGACGTTTGTC
TATAGAGTAAAGAATCCGGCATTGCCGCCCACATTGCGGCAACCTGGTTGGTCTCATGGT
GAAGAGTACCACACGGTTCGGGCTATCGGAAGCTCTAGCAAAGGCCCATCGGCGCACCGG
AGGCTGAATGCTGCTCCAAGAGCATCTCCGGTGATTGACCTCAACGAGGCCTGCGAGCCG
AGTTCAGAAGAGATGGAGGAGCTTCATGGTTACCAGGAACCTGTTAGGGTTGGCAGGGTC
ATGAGGTACCCAATGGAGGGTGATTTTGCCGCCGGTCCTAGTGATGCGAAAATGGCGGCA
TTCTGGGATGTCCGGAACGCCGCCTCCTCCCGAGCTGGGAAGAGGAAGATATCATGGCAG
GATCAGTTAGCTCTCAGAGTATAG

Peptide Sequence

PEP ID

Os08t0270800-02
PEP Infomation

pep chromosome:IRGSP-1.0:8:10367301:10369143:1 gene:Os08g0270800 transcript:Os08t0270800-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os08t0270800-01);Similar to cDNA clone:J013075I05, full insert sequence. (Os08t0270800-02)
Sequence

MKKAKVVLAQPAARAPPSPLLPRAPGHSRGGGVGGGEEAYRARAKYKNLLQDYKELLEET
EAKKKRLQMEKLKKQRLLAEVKFLRKRYKSMSENPSQTFVYRVKNPALPPTLRQPGWSHG
EEYHTVRAIGSSSKGPSAHRRLNAAPRASPVIDLNEACEPSSEEMEELHGYQEPVRVGRV
MRYPMEGDFAAGPSDAKMAAFWDVRNAASSRAGKRKISWQDQLALRV

Transcript Sequence

Transcript ID

Os08t0270800-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:10367301:10369143:1 gene:Os08g0270800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os08t0270800-01);Similar to cDNA clone:J013075I05, full insert sequence. (Os08t0270800-02)
Sequence

CCTTGCTTGTTCCTATCTCCTTCTACCTCTCTCTCTCCCTGGCTTTCTTGGTCTCCTGCT
CTTGCGGGGCGTTTGTTGGTTTCTTCGCGGGTGAGGTGAGGCGGACATGAAGAAGGCTAA
GGTGGTGTTGGCTCAGCCGGCGGCGAGGGCGCCGCCGTCGCCGCTGCTGCCGAGGGCGCC
GGGGCACAGCCGTGGCGGCGGCGTTGGTGGCGGGGAAGAGGCGTACAGGGCGAGGGCCAA
GTACAAGAATCTTCTCCAGGACTACAAGGAGCTCCTCGAGGAAACTGAAGCAAAGAAGAA
GAGATTACAGATGGAGAAGCTCAAGAAACAGAGGCTTTTGGCTGAAGTCAAGTTTTTGCG
GAAAAGGTACAAATCCATGTCCGAAAATCCATCCCAGACGTTTGTCTATAGAGTAAAGAA
TCCGGCATTGCCGCCCACATTGCGGCAACCTGGTTGGTCTCATGGTGAAGAGTACCACAC
GGTTCGGGCTATCGGAAGCTCTAGCAAAGGCCCATCGGCGCACCGGAGGCTGAATGCTGC
TCCAAGAGCATCTCCGGTGATTGACCTCAACGAGGCCTGCGAGCCGAGTTCAGAAGAGAT
GGAGGAGCTTCATGGTTACCAGGAACCTGTTAGGGTTGGCAGGGTCATGAGGTACCCAAT
GGAGGGTGATTTTGCCGCCGGTCCTAGTGATGCGAAAATGGCGGCATTCTGGGATGTCCG
GAACGCCGCCTCCTCCCGAGCTGGGAAGAGGAAGATATCATGGCAGGATCAGTTAGCTCT
CAGAGTATAGGTTAATAATAACAGTGTTGAGATAGTTGGGAAGAGGAACTGAATTTCGTT
CATCCCTGTTCCTCGAGTTGTAAAAGAATCCTTAAGAGGAATCGGTGGATGGGTGTAATG
CTCCTGGCACTTGTTGAGATCGTAGTCGTGTATAATCAATCACTTGTCTGTTTTGTTAGC
GTGAATGCCATCTCAACAACTACTCTAGGGCTAATAGTATTTGAGCAAATGAATAATTAA
TACAAATGCTGTCTGATGCCTTGTAGTAGGTGCTGCAGCTGCATATGTTT