Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0267300-00
CDS Infomation	cds chromosome:IRGSP-1.0:8:10190139:10193202:-1 gene:Os08g0267300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase A1 domain containing protein. (Os08t0267300-00)
Sequence	ATGGATGGCCGCCATCTTCTCCTCCTCCATGTCCTCGCGCTTCTTCTTCTTGCGGTGGTG GTCGCCGCCGGCGGAGGCGCCGTCGTCGGCAGGGACAGCGCAGTGCTTCAGCTGCGCGAG CTGCAATGGGGCTCGTCCGGCCAGGTCCGGTATTCCCAATCAAAGCGCTTTGAGAAGAAG ATGACAGGGGAACACAAGAAAGCAGCAGCAGCAGCAAGAACGAGGACTAGGAGCACCACC GTCCTAGAGCTGAAGCACCACTCCCTCACCGCCATCCCCGACCACCCCGCCGCCCAAGAA ACCTACCTCCGCCGCCTCCTCGCCGCCGACGAGGCGCGTGCCAACTCGTTGCAGCTCCGC AACAAGGCAGCGTTCACGCAGTCCGGCAAGAAGGCGACGGCGGCCGCCGCCGCCGCCGCT GGCGCCGAGGTCCCCCTGACCTCCGGCATCCGCTTCCAGACGCTCAACTACGTCACCACC ATCGCTCTCGGCGGCGGCGGATCCTCCCGCGCCGGCGCCGGCAACCTCACCGTCATCGTC GACACCGGCAGCGACCTCACCTGGGTGCAGTGCAAGCCGTGCTCCGTCTGCTACGCGCAG CGCGACCCGCTGTTCGACCCGTCCGGCTCCGCCTCCTACGCCGCCGTCCCCTGCAATGCC TCCGCCTGCGAAGCCTCCCTCAAGGCGGCCACCGGCGTGCCGGGATCCTGCGCCACCGTC GGCGGCGGCGGCGGCGGCGGGAAGAGCGAGAGGTGCTACTACTCGCTGGCCTACGGCGAC GGGTCGTTCAGCCGCGGCGTGCTCGCCACGGACACGGTCGCGCTCGGCGGCGCCAGCGTC GACGGCTTCGTGTTCGGCTGCGGGCTCAGCAACCGCGGCCTGTTCGGCGGCACGGCGGGG CTCATGGGCCTCGGCCGGACGGAGCTCTCGCTGGTCTCCCAGACGGCGCCCCGGTTCGGC GGCGTCTTCTCCTACTGCCTCCCCGCCGCCACCTCCGGCGACGCCGCGGGCTCCCTCTCC CTCGGCGGCGACACCTCCTCCTACCGCAACGCCACGCCGGTGTCCTACACCCGCATGATC GCCGACCCGGCGCAGCCGCCGTTCTACTTCATGAACGTGACCGGCGCGTCCGTCGGCGGC GCCGCGGTGGCCGCGGCGGGGCTCGGTGCCGCCAACGTCCTCCTCGACTCCGGCACGGTG ATCACGCGCCTCGCGCCGTCGGTGTACCGCGCCGTGCGCGCCGAGTTCGCGCGGCAGTTC GGGGCGGAGCGCTACCCGGCGGCGCCGCCCTTCTCGCTGCTCGACGCGTGCTACAACCTG ACCGGGCACGACGAGGTGAAGGTGCCATTGCTGACGCTGCGCCTCGAGGGCGGCGCCGAC ATGACCGTCGACGCTGCCGGGATGCTGTTCATGGCGAGGAAGGATGGGTCGCAGGTGTGC TTGGCCATGGCGAGCCTCTCATTCGAAGACCAGACGCCCATTATTGGCAACTACCAGCAG AAGAACAAGAGGGTAGTGTATGACACTGTGGGCTCAAGGCTAGGCTTTGCTGATGAGGAT TGTAGCTATGCATAA

Peptide Sequence

PEP ID	Os08t0267300-00
PEP Infomation	pep chromosome:IRGSP-1.0:8:10190139:10193202:-1 gene:Os08g0267300 transcript:Os08t0267300-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase A1 domain containing protein. (Os08t0267300-00)
Sequence	MDGRHLLLLHVLALLLLAVVVAAGGGAVVGRDSAVLQLRELQWGSSGQVRYSQSKRFEKK MTGEHKKAAAAARTRTRSTTVLELKHHSLTAIPDHPAAQETYLRRLLAADEARANSLQLR NKAAFTQSGKKATAAAAAAAGAEVPLTSGIRFQTLNYVTTIALGGGGSSRAGAGNLTVIV DTGSDLTWVQCKPCSVCYAQRDPLFDPSGSASYAAVPCNASACEASLKAATGVPGSCATV GGGGGGGKSERCYYSLAYGDGSFSRGVLATDTVALGGASVDGFVFGCGLSNRGLFGGTAG LMGLGRTELSLVSQTAPRFGGVFSYCLPAATSGDAAGSLSLGGDTSSYRNATPVSYTRMI ADPAQPPFYFMNVTGASVGGAAVAAAGLGAANVLLDSGTVITRLAPSVYRAVRAEFARQF GAERYPAAPPFSLLDACYNLTGHDEVKVPLLTLRLEGGADMTVDAAGMLFMARKDGSQVC LAMASLSFEDQTPIIGNYQQKNKRVVYDTVGSRLGFADEDCSYA

Transcript Sequence

Transcript ID	Os08t0267300-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:10190139:10193202:-1 gene:Os08g0267300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase A1 domain containing protein. (Os08t0267300-00)
Sequence	ATGGATGGCCGCCATCTTCTCCTCCTCCATGTCCTCGCGCTTCTTCTTCTTGCGGTGGTG GTCGCCGCCGGCGGAGGCGCCGTCGTCGGCAGGGACAGCGCAGTGCTTCAGCTGCGCGAG CTGCAATGGGGCTCGTCCGGCCAGGTCCGGTATTCCCAATCAAAGCGCTTTGAGAAGAAG ATGACAGGGGAACACAAGAAAGCAGCAGCAGCAGCAAGAACGAGGACTAGGAGCACCACC GTCCTAGAGCTGAAGCACCACTCCCTCACCGCCATCCCCGACCACCCCGCCGCCCAAGAA ACCTACCTCCGCCGCCTCCTCGCCGCCGACGAGGCGCGTGCCAACTCGTTGCAGCTCCGC AACAAGGCAGCGTTCACGCAGTCCGGCAAGAAGGCGACGGCGGCCGCCGCCGCCGCCGCT GGCGCCGAGGTCCCCCTGACCTCCGGCATCCGCTTCCAGACGCTCAACTACGTCACCACC ATCGCTCTCGGCGGCGGCGGATCCTCCCGCGCCGGCGCCGGCAACCTCACCGTCATCGTC GACACCGGCAGCGACCTCACCTGGGTGCAGTGCAAGCCGTGCTCCGTCTGCTACGCGCAG CGCGACCCGCTGTTCGACCCGTCCGGCTCCGCCTCCTACGCCGCCGTCCCCTGCAATGCC TCCGCCTGCGAAGCCTCCCTCAAGGCGGCCACCGGCGTGCCGGGATCCTGCGCCACCGTC GGCGGCGGCGGCGGCGGCGGGAAGAGCGAGAGGTGCTACTACTCGCTGGCCTACGGCGAC GGGTCGTTCAGCCGCGGCGTGCTCGCCACGGACACGGTCGCGCTCGGCGGCGCCAGCGTC GACGGCTTCGTGTTCGGCTGCGGGCTCAGCAACCGCGGCCTGTTCGGCGGCACGGCGGGG CTCATGGGCCTCGGCCGGACGGAGCTCTCGCTGGTCTCCCAGACGGCGCCCCGGTTCGGC GGCGTCTTCTCCTACTGCCTCCCCGCCGCCACCTCCGGCGACGCCGCGGGCTCCCTCTCC CTCGGCGGCGACACCTCCTCCTACCGCAACGCCACGCCGGTGTCCTACACCCGCATGATC GCCGACCCGGCGCAGCCGCCGTTCTACTTCATGAACGTGACCGGCGCGTCCGTCGGCGGC GCCGCGGTGGCCGCGGCGGGGCTCGGTGCCGCCAACGTCCTCCTCGACTCCGGCACGGTG ATCACGCGCCTCGCGCCGTCGGTGTACCGCGCCGTGCGCGCCGAGTTCGCGCGGCAGTTC GGGGCGGAGCGCTACCCGGCGGCGCCGCCCTTCTCGCTGCTCGACGCGTGCTACAACCTG ACCGGGCACGACGAGGTGAAGGTGCCATTGCTGACGCTGCGCCTCGAGGGCGGCGCCGAC ATGACCGTCGACGCTGCCGGGATGCTGTTCATGGCGAGGAAGGATGGGTCGCAGGTGTGC TTGGCCATGGCGAGCCTCTCATTCGAAGACCAGACGCCCATTATTGGCAACTACCAGCAG AAGAACAAGAGGGTAGTGTATGACACTGTGGGCTCAAGGCTAGGCTTTGCTGATGAGGAT TGTAGCTATGCATAA