Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0254600-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:9411335:9416401:-1 gene:Os08g0254600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to cyclic nucleotide-gated ion channel 14. (Os08t0254600-01)
Sequence	ATGAGGCTTAATCTTATTGAGAACGAAGCAAGACACAGACAGAATAACTTGGCCACAGGT TCAGTTAAAACAATGAGCAGCAAGATAGTGCTCAAGTTAAAGGATTTTACCAGAATCTGG ATAAGCCGCGAAGAGAGTATGCTAGACCCTGGAGGCAATGTTGTGCTGATGTGGAACCGT GTCTTCCTCGTCTCATGCGTTGCTTCTCACTTCATTGATCCTCTCTTCTTCTTCCTGCCA ATTGTTGAGCGCAGAGACCGCCAGTTGTGTATGACAATGGACCATCATCTCGCCATTATA CTCACTTGTCTACGGTCTTTTCTTGACATATTCTTCATAGCTCATATTGCTATAAGTTTC TCCACTGCACATGTTGATCCAAGCTCCAAAGTGCTTGGCAGGGGTGAGCTTGTCACAGAT CCTAAAAAGATTGCAAATAGATACATCAGAACAAACTTCTTCATTGACCTAGTAGCTGCA TTGCCAGTTCCACAAGTTCTTGTTTGGATAGCCATGCCATCTATCAGCTTCAAGCATATC AATGCCCCTTTCTTTCTTATAATATTGGTCCAATCTGCCATCAGATTATACATCGTAATT CTTCTCAGCCTTAGTATCATGGAGATGGTGGGTTTCATCGCAAAAAATGGGTGGGAAGGA GCTATCTACAGTCTAGTTCTTTATTTGGTGGCAAGTCACGTGGTTGGAGCAATATTCTAT CTAACTGCAGTGGATCGACAAAAGACATGCTGGGAAACACAGTGCTCTATTGAGGACAGA ATGGCACACAAAGGACTGTGTGATTTACACTTCCTTGACTGCAAATATGCCACATCAAGT AACAGTCAAAGTTGGGCAAATAGCACAAATGTGTTCACACATTGTAACGCCAACAGCAAT AGTGTCAGTATCAACTATGGCATATTCATTCAAGCAATACAAAATGGAGTGACCACAGCT TCATTCTCTGAGAAATATTTCTACTCCCTGTGGTGGGGACTTCAACAGTTGACCACGTAT GGCAATCCTTTGGTGACTAGTTCCTTCATTGGTGAAAACCTATTTGCAATAGGGTTAACC CTTCTCAGCATTGGTTTGTTTGCACAACTAATAGGCAACATGCAGATACACATGAGATCT CTTTCTAAAAATACTGAAGATTGGAGAATGTGGCAAACAGAAATGGAAGATTGGATGATA GATCATCAAATACCTGATGAGCTGCGATACCGCATCAGTCAATTCTTCAAATACAAGTGG TTTGCTACGCAGGGAGTTGAAGAGGATTCAATCTTGAGACAACTACCAGCAGATCTTCAT CGAGATATAAAACGGTACCTGTGCCTTGATCTTGTCGAACGTGTGCCATTTTTTTCTGCA ATGGACCATCAACTACTCGATGCCATCTGTGAACGCATGACCTACTTCCTTCGCACTGAA GGCACCTACATAACCCGTGAGGGAGACCCTGTCAAGGTGATGCTCTTCATTATTCGTGGC AAGCTAGAGAGCTCCACAACAGATGGTGGCAGAACTGGCTTCTTCAACTCCATCATCCTA AAACCAGGTGATTTTTGTGGTGAGGAGTTGCTTACATGGGCATTGCTTCCCAGCTCTAGA GACAGCTATCCATCATCAACAAGAACTGTTAAAACAATTGCCGAATTGGAAGCATTCTCC CTCCAAGCCGATGACATTAAGTGCGTAGCCAGCACATTCAGGATGATGCATTCCAAGCAC CTGCAGCACACATTCAGGTTACACTCATACCAGTGGAGAACATGGGCCGCTCGCTTTATC CAATCAGCATGGCGAAGGCGCCAGAATCGACAAAAAATGGCAGAAGTAGGTCTAAGCAAC AGGTGGAAGTCATTCTTCTCATTGGTCAATGACTTCAATGACACGAGATGTGAGGACATT AATGGTTCTTCTAGCACTGTATCACACAGAGAAACAGTTACTGTCTCAAAAATAGCATCA ATATTCAAAAAAGCACAGAAGGAGCGACCTGAAGAACCTGATTTCTCTGAAGATCATCAT CCAGAGTAA

Peptide Sequence

PEP ID	Os08t0254600-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:9411335:9416401:-1 gene:Os08g0254600 transcript:Os08t0254600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to cyclic nucleotide-gated ion channel 14. (Os08t0254600-01)
Sequence	MRLNLIENEARHRQNNLATGSVKTMSSKIVLKLKDFTRIWISREESMLDPGGNVVLMWNR VFLVSCVASHFIDPLFFFLPIVERRDRQLCMTMDHHLAIILTCLRSFLDIFFIAHIAISF STAHVDPSSKVLGRGELVTDPKKIANRYIRTNFFIDLVAALPVPQVLVWIAMPSISFKHI NAPFFLIILVQSAIRLYIVILLSLSIMEMVGFIAKNGWEGAIYSLVLYLVASHVVGAIFY LTAVDRQKTCWETQCSIEDRMAHKGLCDLHFLDCKYATSSNSQSWANSTNVFTHCNANSN SVSINYGIFIQAIQNGVTTASFSEKYFYSLWWGLQQLTTYGNPLVTSSFIGENLFAIGLT LLSIGLFAQLIGNMQIHMRSLSKNTEDWRMWQTEMEDWMIDHQIPDELRYRISQFFKYKW FATQGVEEDSILRQLPADLHRDIKRYLCLDLVERVPFFSAMDHQLLDAICERMTYFLRTE GTYITREGDPVKVMLFIIRGKLESSTTDGGRTGFFNSIILKPGDFCGEELLTWALLPSSR DSYPSSTRTVKTIAELEAFSLQADDIKCVASTFRMMHSKHLQHTFRLHSYQWRTWAARFI QSAWRRRQNRQKMAEVGLSNRWKSFFSLVNDFNDTRCEDINGSSSTVSHRETVTVSKIAS IFKKAQKERPEEPDFSEDHHPE

Transcript Sequence

Transcript ID	Os08t0254600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:9411335:9416401:-1 gene:Os08g0254600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to cyclic nucleotide-gated ion channel 14. (Os08t0254600-01)
Sequence	AGCTCGCTCGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCAGTGTTCCTAGCTACAACGA GTGGTTTACTTTCTCATCCTAGGTAGCTTGTCTCCATTGTTTTCCCAAGAGGAGAGGTTC TAGAAGCTTCTAGATAATGGCAGTCGATCCCGTGTCTCTTTTGTGTTCGTGCTAGAGAGT GAGTGATGATGTGTGGGATTCTATGGTTATATATATTGAATTTTTCTTGAGTGTGTTCTC TAGGAAATTCGGTTTTATGTGCAAGATAAAAGGCAAAGAGACGAGATTGGTGGCTGTGGA TGAGGAGGCTTAGCTCTTGAGAAAAGGATCGATTGACAAGAACATGAGGCTTAATCTTAT TGAGAACGAAGCAAGACACAGACAGAATAACTTGGCCACAGGTTCAGTTAAAACAATGAG CAGCAAGATAGTGCTCAAGTTAAAGGATTTTACCAGAATCTGGATAAGCCGCGAAGAGAG TATGCTAGACCCTGGAGGCAATGTTGTGCTGATGTGGAACCGTGTCTTCCTCGTCTCATG CGTTGCTTCTCACTTCATTGATCCTCTCTTCTTCTTCCTGCCAATTGTTGAGCGCAGAGA CCGCCAGTTGTGTATGACAATGGACCATCATCTCGCCATTATACTCACTTGTCTACGGTC TTTTCTTGACATATTCTTCATAGCTCATATTGCTATAAGTTTCTCCACTGCACATGTTGA TCCAAGCTCCAAAGTGCTTGGCAGGGGTGAGCTTGTCACAGATCCTAAAAAGATTGCAAA TAGATACATCAGAACAAACTTCTTCATTGACCTAGTAGCTGCATTGCCAGTTCCACAAGT TCTTGTTTGGATAGCCATGCCATCTATCAGCTTCAAGCATATCAATGCCCCTTTCTTTCT TATAATATTGGTCCAATCTGCCATCAGATTATACATCGTAATTCTTCTCAGCCTTAGTAT CATGGAGATGGTGGGTTTCATCGCAAAAAATGGGTGGGAAGGAGCTATCTACAGTCTAGT TCTTTATTTGGTGGCAAGTCACGTGGTTGGAGCAATATTCTATCTAACTGCAGTGGATCG ACAAAAGACATGCTGGGAAACACAGTGCTCTATTGAGGACAGAATGGCACACAAAGGACT GTGTGATTTACACTTCCTTGACTGCAAATATGCCACATCAAGTAACAGTCAAAGTTGGGC AAATAGCACAAATGTGTTCACACATTGTAACGCCAACAGCAATAGTGTCAGTATCAACTA TGGCATATTCATTCAAGCAATACAAAATGGAGTGACCACAGCTTCATTCTCTGAGAAATA TTTCTACTCCCTGTGGTGGGGACTTCAACAGTTGACCACGTATGGCAATCCTTTGGTGAC TAGTTCCTTCATTGGTGAAAACCTATTTGCAATAGGGTTAACCCTTCTCAGCATTGGTTT GTTTGCACAACTAATAGGCAACATGCAGATACACATGAGATCTCTTTCTAAAAATACTGA AGATTGGAGAATGTGGCAAACAGAAATGGAAGATTGGATGATAGATCATCAAATACCTGA TGAGCTGCGATACCGCATCAGTCAATTCTTCAAATACAAGTGGTTTGCTACGCAGGGAGT TGAAGAGGATTCAATCTTGAGACAACTACCAGCAGATCTTCATCGAGATATAAAACGGTA CCTGTGCCTTGATCTTGTCGAACGTGTGCCATTTTTTTCTGCAATGGACCATCAACTACT CGATGCCATCTGTGAACGCATGACCTACTTCCTTCGCACTGAAGGCACCTACATAACCCG TGAGGGAGACCCTGTCAAGGTGATGCTCTTCATTATTCGTGGCAAGCTAGAGAGCTCCAC AACAGATGGTGGCAGAACTGGCTTCTTCAACTCCATCATCCTAAAACCAGGTGATTTTTG TGGTGAGGAGTTGCTTACATGGGCATTGCTTCCCAGCTCTAGAGACAGCTATCCATCATC AACAAGAACTGTTAAAACAATTGCCGAATTGGAAGCATTCTCCCTCCAAGCCGATGACAT TAAGTGCGTAGCCAGCACATTCAGGATGATGCATTCCAAGCACCTGCAGCACACATTCAG GTTACACTCATACCAGTGGAGAACATGGGCCGCTCGCTTTATCCAATCAGCATGGCGAAG GCGCCAGAATCGACAAAAAATGGCAGAAGTAGGTCTAAGCAACAGGTGGAAGTCATTCTT CTCATTGGTCAATGACTTCAATGACACGAGATGTGAGGACATTAATGGTTCTTCTAGCAC TGTATCACACAGAGAAACAGTTACTGTCTCAAAAATAGCATCAATATTCAAAAAAGCACA GAAGGAGCGACCTGAAGAACCTGATTTCTCTGAAGATCATCATCCAGAGTAACACAAACT GCATTCAATATAATCAAATGATGCAAATAGTAACGTACTAATTATACAAGTGGTGATCGT TTCTGTATGATAATTATAGTTCCTGGATGTTTACTCTCATTCGCCAATAACTGTTCACTT AGTTATCTTAGTGCTCACTTAAATTATTAAATACTGTATCGCAGAAAAGGCTACCAAATG TGGGGAGGGTCACGTCCACAAGTAAGCATATGCCAGCTATATTAGAGTTTGCAATAGCCT CATATGTAAAACAAAAATAACTGCTTCTCATCGTCTCAACATGTATTAAGTACTCAGCCA ATTCTACTATAGCTGATGAGGTCTGAGCAATATGGTAGAAAGTTCATATTCTGAGG