Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0254500-02
CDS Infomation	cds chromosome:IRGSP-1.0:8:9405709:9414700:1 gene:Os08g0254500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SECY description:Similar to Preprotein translocase secY subunit, chloroplast precursor (CpSecY). (Os08t0254500-01);Similar to Preprotein translocase secY subunit, chloroplast precursor (CpSecY). (Os08t0254500-02);Similar to Preprotein translocase subunit secY, chloroplastic. (Os08t0254500-03)
Sequence	ATGGCGGCCATGGCCACCCCGCAGCAATGCTGGCTCCCCACCCGCGCGCGCGCTCCCCCT CCTCCTCCTCCACGCGCACCCTCCTCCGCGTCCCCCGTCTCCGGAGCTCCCGCCTCCCTC CGCTTCCGTGGGCGCCGCGCCGCGTCGGCGTCGGCGTCGGCGGCGAGGAGGAGGAGGGGA GCCTCCCTGCCCTGCTCCCCCAGGTGCGCGTTGGAGACGGCTGGCCCTGGCTTTGATCCC CTAGGGCTGTACAACGATGGGCCTTCGAGGAATGACACGCAGTCCCCGCTGTCGAACTTC TTCGGAGTACTGTCGCCGGTGTTCGGGAGCTCGAGCGGCGGCAGGAAGGAGAAGTCCTAT GGACGAGGAGCAGCAGCTGCAATTGAAGATAGTTCCATTGACATTGGTGACTTCTTCAAG GGTCCTCTACCTGGGAAGTTCTTGAAGCTCCTTGGTTATTTGGCCTTGTCTCGACTTGGT ATTTATATACCTCTGGGTGGAGTGAACCGGGATGCTTTCGCTGGTAATCTTGACCAGAAC AGTCTACTAGGCACTTTGGATTCTTTTTCTGGTGGAGGTATTGGCCGACTTGGAATATGC TCCCTTGGCATTGTTCCATTTATCAATGCACAGATTGTGTTTCAGCTTCTTGCACAACTT TATCCCAAATTGCAAGATCTTCAGAAAAAAGAAGGAGAGGCAGGAAGAAAGAAGGTTCTT CAGTATACAAGATACGCATCTGTTGGTTTTGCAATTGTCCAGGCTATTGGGCAAGTTCTT TTTCTTCGTCCTTATGTTAATGACTTCAGCACAGAATGGGTCCTCACATCTGTGACACTA CTGACGCTTGGATCGGTGTTTACAACTTTCATTGGCGAAAGAATATCTGATTTAAAACTC GGAAATGGAACATCTCTTCTTATATTTACAAGTATAATATCGTATTTACCTGCATCGTTT GGAAGGACAGTTGCACAGGCATTTCAAGATGGGAATTATGTTGGGCTTCTGACAATCATA TTATCGTTCCTTTTCTTAGTTCTTGGGATTGTTTATGTCCAAGAAGCCGAGAGGAAAATT CCGCTAAATTATGCTTCTCGATACAGTAGTCGGAGTGGAGGGCTCCAACGATCTGCATAT CTACCATTTAAGGTCAATAGTTCTGGTGTCATGCCTATAATATTTTCTACATCTTCTTTG GCTTTGCCTGGTACTTTGGCACGATTTACTGGCTTAGAGTTTCTTAAAAAGGCTGCCATA TCCCTAAATCCAGGAGGTGCTTTGTATATTCCAACTAATGTACTGCTTATAGCCTTTTTC AATTACTATTACACCTTCCTTCAATTGGATCCTGATGATCTTAGTGAGCAATTGAAGCGG CAAGGTGCTTCAATACCGCTTGTACGGCCAGGGAAAAGTACAGCTGCCTTCATAAAAACA GTTCTTAGTAATATATCTGTCCTAGGATCTGCCTTCCTTGCTGTTTTAGCTGCTGGACCA TCTGTGGTTGAACAAATCACTCACTTAACGGCATTTCGGGGATTTGCTGGTACATCAGTG CTTATCCTTGTTGGATGTGCAACAGACACAGCTCGGAAAGTTCAGGCAGAAATAATTTCA CAGAAATATAAGAACATTGAGTTCTATGATGTCAACCGTTTTGACCAATGA

Peptide Sequence

PEP ID	Os08t0254500-02
PEP Infomation	pep chromosome:IRGSP-1.0:8:9405709:9414700:1 gene:Os08g0254500 transcript:Os08t0254500-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SECY description:Similar to Preprotein translocase secY subunit, chloroplast precursor (CpSecY). (Os08t0254500-01);Similar to Preprotein translocase secY subunit, chloroplast precursor (CpSecY). (Os08t0254500-02);Similar to Preprotein translocase subunit secY, chloroplastic. (Os08t0254500-03)
Sequence	MAAMATPQQCWLPTRARAPPPPPPRAPSSASPVSGAPASLRFRGRRAASASASAARRRRG ASLPCSPRCALETAGPGFDPLGLYNDGPSRNDTQSPLSNFFGVLSPVFGSSSGGRKEKSY GRGAAAAIEDSSIDIGDFFKGPLPGKFLKLLGYLALSRLGIYIPLGGVNRDAFAGNLDQN SLLGTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQLYPKLQDLQKKEGEAGRKKVL QYTRYASVGFAIVQAIGQVLFLRPYVNDFSTEWVLTSVTLLTLGSVFTTFIGERISDLKL GNGTSLLIFTSIISYLPASFGRTVAQAFQDGNYVGLLTIILSFLFLVLGIVYVQEAERKI PLNYASRYSSRSGGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGLEFLKKAAI SLNPGGALYIPTNVLLIAFFNYYYTFLQLDPDDLSEQLKRQGASIPLVRPGKSTAAFIKT VLSNISVLGSAFLAVLAAGPSVVEQITHLTAFRGFAGTSVLILVGCATDTARKVQAEIIS QKYKNIEFYDVNRFDQ

Transcript Sequence

Transcript ID	Os08t0254500-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:9405709:9414700:1 gene:Os08g0254500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SECY description:Similar to Preprotein translocase secY subunit, chloroplast precursor (CpSecY). (Os08t0254500-01);Similar to Preprotein translocase secY subunit, chloroplast precursor (CpSecY). (Os08t0254500-02);Similar to Preprotein translocase subunit secY, chloroplastic. (Os08t0254500-03)
Sequence	ATGGCGGCCATGGCCACCCCGCAGCAATGCTGGCTCCCCACCCGCGCGCGCGCTCCCCCT CCTCCTCCTCCACGCGCACCCTCCTCCGCGTCCCCCGTCTCCGGAGCTCCCGCCTCCCTC CGCTTCCGTGGGCGCCGCGCCGCGTCGGCGTCGGCGTCGGCGGCGAGGAGGAGGAGGGGA GCCTCCCTGCCCTGCTCCCCCAGGTGCGCGTTGGAGACGGCTGGCCCTGGCTTTGATCCC CTAGGGCTGTACAACGATGGGCCTTCGAGGAATGACACGCAGTCCCCGCTGTCGAACTTC TTCGGAGTACTGTCGCCGGTGTTCGGGAGCTCGAGCGGCGGCAGGAAGGAGAAGTCCTAT GGACGAGGAGCAGCAGCTGCAATTGAAGATAGTTCCATTGACATTGGTGACTTCTTCAAG GGTCCTCTACCTGGGAAGTTCTTGAAGCTCCTTGGTTATTTGGCCTTGTCTCGACTTGGT ATTTATATACCTCTGGGTGGAGTGAACCGGGATGCTTTCGCTGGTAATCTTGACCAGAAC AGTCTACTAGGCACTTTGGATTCTTTTTCTGGTGGAGGTATTGGCCGACTTGGAATATGC TCCCTTGGCATTGTTCCATTTATCAATGCACAGATTGTGTTTCAGCTTCTTGCACAACTT TATCCCAAATTGCAAGATCTTCAGAAAAAAGAAGGAGAGGCAGGAAGAAAGAAGGTTCTT CAGTATACAAGATACGCATCTGTTGGTTTTGCAATTGTCCAGGCTATTGGGCAAGTTCTT TTTCTTCGTCCTTATGTTAATGACTTCAGCACAGAATGGGTCCTCACATCTGTGACACTA CTGACGCTTGGATCGGTGTTTACAACTTTCATTGGCGAAAGAATATCTGATTTAAAACTC GGAAATGGAACATCTCTTCTTATATTTACAAGTATAATATCGTATTTACCTGCATCGTTT GGAAGGACAGTTGCACAGGCATTTCAAGATGGGAATTATGTTGGGCTTCTGACAATCATA TTATCGTTCCTTTTCTTAGTTCTTGGGATTGTTTATGTCCAAGAAGCCGAGAGGAAAATT CCGCTAAATTATGCTTCTCGATACAGTAGTCGGAGTGGAGGGCTCCAACGATCTGCATAT CTACCATTTAAGGTCAATAGTTCTGGTGTCATGCCTATAATATTTTCTACATCTTCTTTG GCTTTGCCTGGTACTTTGGCACGATTTACTGGCTTAGAGTTTCTTAAAAAGGCTGCCATA TCCCTAAATCCAGGAGGTGCTTTGTATATTCCAACTAATGTACTGCTTATAGCCTTTTTC AATTACTATTACACCTTCCTTCAATTGGATCCTGATGATCTTAGTGAGCAATTGAAGCGG CAAGGTGCTTCAATACCGCTTGTACGGCCAGGGAAAAGTACAGCTGCCTTCATAAAAACA GTTCTTAGTAATATATCTGTCCTAGGATCTGCCTTCCTTGCTGTTTTAGCTGCTGGACCA TCTGTGGTTGAACAAATCACTCACTTAACGGCATTTCGGGGATTTGCTGGTACATCAGTG CTTATCCTTGTTGGATGTGCAACAGACACAGCTCGGAAAGTTCAGGCAGAAATAATTTCA CAGAAATATAAGAACATTGAGTTCTATGATGTCAACCGTTTTGACCAATGATTAATGACA CTGATCATTCTTTTCAACTTGTACCAAATGTTCTGTTGTATTATAATTGGGTCATGTGGT AGCATTTAAGACTGTTCAATTTTATGCCCGTTTTCCTTCTATCGTGCATATCACTTGTAT GTTTACTTGAGGAGCAGAAACCATACATCCTTATGTACATAAATATATTAGAATTATTTA CCTCAGAATATGAACTTTCTACCATATTGCTCAGACCTCATCAGCTATAGTAGAATTGGC TGAGTACTTAATACATGTTGAGACGATGAGAAGCAGTTATTTTTGTTTTACATATGAGGC TATTGCAAACTCTAATATAGCTGGCATATGCTTACTTGTGGACGTGACCCTCCCCACATT TGGTAGCCTTTTCTGCGATACAGTATTTAATAATTTAAGTGAGCACTAAGATAACTAAGT GAACAGTTATTGGCGAATGAGAGTAAACATCCAGGAACTATAATTATCATACAGAAACGA TCACCACTTGTATAATTAGTACGTTACTATTTGCATCATTTGATTATATTGAATGCAGTT TGTGTTACTCTGGATGATGATCTTCAGAGAAATCAGGTTCTTCAGGTCGCTCCTTCTGTG CTTTTTTGAATATTGATGCTATTTTTGAGACAGTAACTGTTTCTCTGTGTGATACAGTGC TAGAAGAACCATTAATGTCCTCACATCTCGTGTCATTGAAGTCATTGACCAATGAGAAGA ATGACTTCCACCTGTTGCTTAGACCTACTTCTGCCATTTTTTGTCGATTCTGGCGCCTTC GCCATGCTGATTGGATAAAGCGAGCGGCCCATGTTCTCCACTGGTATGAGTGTAACCTGA ATGTGTGCTGCAGGTGCTTGGAATGCATCATCCTGAATGTGCTGGCTACGCACTTAATGT CATCGGCTTGGAGGGAGAATGCTTCCAATTCGGCAATTGTTTTAACAGTTCTTGTTGATG ATGGATAGCTGTCTCTAGAGCTGGGAAGCAATGCCCATAAGATATTTGCAGGAACAGGAC TCACGTACACGTTCGACAAGATCAAGGCACAGGATCTGTGACAAGCTCACCCCTGCCAAG CACTTTGGAGCTTGGATCAACATGTGCAGTGGAGAAACTTATAGCAATATGAGCTATGAA GAATATGTCAAGAAAAGACCGTAGACAAGTGAGTATAATGGCGAGATGATGGTCCATTGT CATACACAACTGGCGGTCTCTGCGCTCAACAATTGGCAGGAAGAAGAAGAGAGGATCAAT GAAGTGAGAAGCAACGCATGAGACGAGGAAGACACGGTTCCACATCAGCACAACATTGCC TCCAGGGTCTAGCATACTCTCTTCGCGGCTTATCCAGATTCTGGTAAAATCCTTTAACTT GAGCACTATCTTGCTGCTCATTGTTTTAACTGAACCTGTGGCCAAGTTATTCTGTCTGTG TCTTGCTTCGTTCTCAATAAGATTAAGCCTGCAGAGTAAAAAAAATCAATGAAAAATTAT ACGACCTAAGTACAAAGAACTTTACTTTTTTGTTTCCTGG