Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0253800-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:9384129:9387669:1 gene:Os08g0253800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CELLULOSE SYNTHASE LIKE C3 description:Similar to Cellulose synthase-like family C3 protein (Fragment). (Os08t0253800-01)
Sequence	ATGCCAATGTGCAACGAGAAAGAGGTGTATGAGACGTCGATATCGCATGTGTGCCAGATC GACTGGCCGCGGGAGAGGATGCTGGTGCAAGTGCTGGACGACTCGGACGACGAGACGTGC CAGATGCTGATCAAGGCGGAGGTGACCAAGTGGAGCCAGCGCGGCGTCAACATCATCTAC CGCCACCGCCTCAACCGCACCGGTTACAAGGCCGGCAACCTCAAGTCCGCCATGAGCTGC GACTACGTCCGCGACTACGAGTTCGTCGCCATCTTCGACGCTGACTTCCAGCCTAACCCC GACTTCCTCAAGCTCACCGTCCCACACTTCAAGGGAAACCCGGAGCTAGGGCTGGTGCAG GCGCGGTGGAGCTTCGTGAACAAGGACGAGAACCTGCTGACCCGGCTGCAGAACATAAAC CTGTGCTTCCACTTCGAGGTGGAGCAGCAGGTGAATGGCGTCTACCTCAGCTTCTTCGGG TTCAACGGCACCGCCGGCGTGTGGCGCATCAAGGCCCTCGAGGACTCCGGCGGCTGGATG GAGCGGACCACCGTCGAGGACATGGACATCGCCGTCCGCGCCCACCTCAACGGCTGGAAG TTCATCTTCCTCAACGACGTCAAGGTCCTCTGTGAGCTGCCGGAGTCGTACCAGGCTTAC CGGAAGCAGCAGCACCGGTGGCACTCCGGCCCCATGCAGCTCTTCCGTCTCTGCCTCCCG GCCGTCTTCAAGTCCAAGATCTCGACGTGGAAGAAGGCGAACCTGGTTATGCTGTTCTTC CTGCTGCGGAAGCTGATCCTGCCATTCTACTCGTTCACGCTCTTCTGCGTGATCCTGCCG CTGACCATGTTCGTGCCGGAGGCGGAGCTGCCGATCTGGGTGATCTGCTACGTGCCGGTG ATCATGTCGGTGCTCAACATCCTGCCGGCGCCCAAGTCGTTCCCCTTCGTCATCCCTTAC CTCCTCTTCGAGAACACCATGTCCGTCACCAAGTTCAACGCCATGGTCTCCGGCCTCTTC CAGCTGGGGAGCTCCTACGAGTGGGTCGTCACCAAGAAGGCCGGCAGGACCTCGTCGGAG TCCGACATCCTCGCCCTCGCCGAGGCCGCCGACGCCGACGCCCGGCCGCCACCGGCCAAG CTCCACCGCGGCGTCTCCGAGGGCGGCCTCAAGGAGTGGGCCAAGCTGCACAAGGAGCAG GAGGACGCCACGGCGGCGGCGGCGGCGGCGGCGGCGCCGGGGACGCCGGTGAAGAAGAGC AAGGCGGCGAAGGCTCCGAACCGGATCTTCAAGAAGGAGCTCGCGCTGGCGTTCCTCCTC CTCACCGCCGCCACGCGCAGCTTGCTCTCGGCGCAGGGGCTGCACTTCTACTTCCTCCTC TTCCAGGGCGTCACCTTCCTCGCCGTCGGCCTCGACCTCATCGGCGAGCAGGTCAGCTAG

Peptide Sequence

PEP ID	Os08t0253800-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:9384129:9387669:1 gene:Os08g0253800 transcript:Os08t0253800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CELLULOSE SYNTHASE LIKE C3 description:Similar to Cellulose synthase-like family C3 protein (Fragment). (Os08t0253800-01)
Sequence	MPMCNEKEVYETSISHVCQIDWPRERMLVQVLDDSDDETCQMLIKAEVTKWSQRGVNIIY RHRLNRTGYKAGNLKSAMSCDYVRDYEFVAIFDADFQPNPDFLKLTVPHFKGNPELGLVQ ARWSFVNKDENLLTRLQNINLCFHFEVEQQVNGVYLSFFGFNGTAGVWRIKALEDSGGWM ERTTVEDMDIAVRAHLNGWKFIFLNDVKVLCELPESYQAYRKQQHRWHSGPMQLFRLCLP AVFKSKISTWKKANLVMLFFLLRKLILPFYSFTLFCVILPLTMFVPEAELPIWVICYVPV IMSVLNILPAPKSFPFVIPYLLFENTMSVTKFNAMVSGLFQLGSSYEWVVTKKAGRTSSE SDILALAEAADADARPPPAKLHRGVSEGGLKEWAKLHKEQEDATAAAAAAAAPGTPVKKS KAAKAPNRIFKKELALAFLLLTAATRSLLSAQGLHFYFLLFQGVTFLAVGLDLIGEQVS

Transcript Sequence

Transcript ID	Os08t0253800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:9384129:9387669:1 gene:Os08g0253800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CELLULOSE SYNTHASE LIKE C3 description:Similar to Cellulose synthase-like family C3 protein (Fragment). (Os08t0253800-01)
Sequence	CTCATCCAGATGCCAATGTGCAACGAGAAAGAGGTGTATGAGACGTCGATATCGCATGTG TGCCAGATCGACTGGCCGCGGGAGAGGATGCTGGTGCAAGTGCTGGACGACTCGGACGAC GAGACGTGCCAGATGCTGATCAAGGCGGAGGTGACCAAGTGGAGCCAGCGCGGCGTCAAC ATCATCTACCGCCACCGCCTCAACCGCACCGGTTACAAGGCCGGCAACCTCAAGTCCGCC ATGAGCTGCGACTACGTCCGCGACTACGAGTTCGTCGCCATCTTCGACGCTGACTTCCAG CCTAACCCCGACTTCCTCAAGCTCACCGTCCCACACTTCAAGGGAAACCCGGAGCTAGGG CTGGTGCAGGCGCGGTGGAGCTTCGTGAACAAGGACGAGAACCTGCTGACCCGGCTGCAG AACATAAACCTGTGCTTCCACTTCGAGGTGGAGCAGCAGGTGAATGGCGTCTACCTCAGC TTCTTCGGGTTCAACGGCACCGCCGGCGTGTGGCGCATCAAGGCCCTCGAGGACTCCGGC GGCTGGATGGAGCGGACCACCGTCGAGGACATGGACATCGCCGTCCGCGCCCACCTCAAC GGCTGGAAGTTCATCTTCCTCAACGACGTCAAGGTCCTCTGTGAGCTGCCGGAGTCGTAC CAGGCTTACCGGAAGCAGCAGCACCGGTGGCACTCCGGCCCCATGCAGCTCTTCCGTCTC TGCCTCCCGGCCGTCTTCAAGTCCAAGATCTCGACGTGGAAGAAGGCGAACCTGGTTATG CTGTTCTTCCTGCTGCGGAAGCTGATCCTGCCATTCTACTCGTTCACGCTCTTCTGCGTG ATCCTGCCGCTGACCATGTTCGTGCCGGAGGCGGAGCTGCCGATCTGGGTGATCTGCTAC GTGCCGGTGATCATGTCGGTGCTCAACATCCTGCCGGCGCCCAAGTCGTTCCCCTTCGTC ATCCCTTACCTCCTCTTCGAGAACACCATGTCCGTCACCAAGTTCAACGCCATGGTCTCC GGCCTCTTCCAGCTGGGGAGCTCCTACGAGTGGGTCGTCACCAAGAAGGCCGGCAGGACC TCGTCGGAGTCCGACATCCTCGCCCTCGCCGAGGCCGCCGACGCCGACGCCCGGCCGCCA CCGGCCAAGCTCCACCGCGGCGTCTCCGAGGGCGGCCTCAAGGAGTGGGCCAAGCTGCAC AAGGAGCAGGAGGACGCCACGGCGGCGGCGGCGGCGGCGGCGGCGCCGGGGACGCCGGTG AAGAAGAGCAAGGCGGCGAAGGCTCCGAACCGGATCTTCAAGAAGGAGCTCGCGCTGGCG TTCCTCCTCCTCACCGCCGCCACGCGCAGCTTGCTCTCGGCGCAGGGGCTGCACTTCTAC TTCCTCCTCTTCCAGGGCGTCACCTTCCTCGCCGTCGGCCTCGACCTCATCGGCGAGCAG GTCAGCTAGCGACCACCACCACAATAAAGAAAAAAAAGCCACCGCCGCCGCCGCTGCCGC CGCCATGCGTGCACAGCGCGCCGGCTGGCTGGCCGGAGGCGAAGACGACGACGGCCAGCC AAGACACTTCCATGGATCGACAGAGGATTACATTTTTAGCCTTCTTCTCCTTATTTTTAT CCCTTTGATATATTTTTTGTTCAGAGATAAAAAAAACAGAGTGCGTCTCCATGTTACAAA GAACTCTTCTTTTCTTTGTGCTTTAATTAGCTAGTGCTTTGTTGCTAGGAGAGGCAAGCA GGCCGCATCAGGTTGTTAATTACATTCAGATTAAGTTGTGTCAATTCAGTAGCC