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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0250700-01
CDS Infomation

cds chromosome:IRGSP-1.0:8:9191621:9201077:1 gene:Os08g0250700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Thioredoxin domain 2 containing protein. (Os08t0250700-01)
Sequence

ATGGATCAGTCCATCGTCGGCCAGATCTTGGAGAAGCAGGTGCTGTCGGTGGCCAAGGCG
GTGGAGGACAAGCTCGACGAGCAGATCGCCGCGCTCGACCGCCTCGACCCGGACGACATC
GAGGCGCTCCGCGAGCGCCGGATCCTGCAGATGCGCCGCGCCGCCGAGCGCAGGGCCAAG
TGGCGCGCCCTCGGCCACGGCGAGTACGGGGAGGTCCCCGAGAAGGAGTTCTTCGCCGCC
GCCAAGGCCAGCGACCGCCTCGTCTGCCACTTCTACCGCGACAACTGGCCCTGCAAGGTT
ATGGACAAGCACTTGTCAATTCTCGCGAAACAGCATGTAGAAACACGTTTTGTGAAAGTT
CATGCTGAAAAGGCTCCCTTTTTGACAGAGAAACTAAGGATTGTTGTTCTCCCAACTCTT
GCATTGGTAAAGAACACCAAAGTTGAGGATTATGTGGTTGGGTTTGATGAGCTTGGTGGT
AAAGATGATTTCAGCACTGAGGATCTGGAGGAACGTCTAGCGAAAGCTCAAGTGATCTTC
CTTGATGGAGAAGGGCCTGCACATGCATCCAAGCAGGCAACCAAACGAAGCGTTCGGCAA
TCAGATACTGGCAACTCATCGGACTCTGAATAG

Peptide Sequence

PEP ID

Os08t0250700-01
PEP Infomation

pep chromosome:IRGSP-1.0:8:9191621:9201077:1 gene:Os08g0250700 transcript:Os08t0250700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Thioredoxin domain 2 containing protein. (Os08t0250700-01)
Sequence

MDQSIVGQILEKQVLSVAKAVEDKLDEQIAALDRLDPDDIEALRERRILQMRRAAERRAK
WRALGHGEYGEVPEKEFFAAAKASDRLVCHFYRDNWPCKVMDKHLSILAKQHVETRFVKV
HAEKAPFLTEKLRIVVLPTLALVKNTKVEDYVVGFDELGGKDDFSTEDLEERLAKAQVIF
LDGEGPAHASKQATKRSVRQSDTGNSSDSE

Transcript Sequence

Transcript ID

Os08t0250700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:9191621:9201077:1 gene:Os08g0250700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Thioredoxin domain 2 containing protein. (Os08t0250700-01)
Sequence

ACCTCTCTTCCCTCCTCCCTAACCACCACCACCACCACCACTCCAGAAGCTCTCGCCATC
CCCCACTTCCCCCCTCCGATCTCCGCTCCGATCCCCCCGCCGCCGCCGCCATGGATCAGT
CCATCGTCGGCCAGATCTTGGAGAAGCAGGTGCTGTCGGTGGCCAAGGCGGTGGAGGACA
AGCTCGACGAGCAGATCGCCGCGCTCGACCGCCTCGACCCGGACGACATCGAGGCGCTCC
GCGAGCGCCGGATCCTGCAGATGCGCCGCGCCGCCGAGCGCAGGGCCAAGTGGCGCGCCC
TCGGCCACGGCGAGTACGGGGAGGTCCCCGAGAAGGAGTTCTTCGCCGCCGCCAAGGCCA
GCGACCGCCTCGTCTGCCACTTCTACCGCGACAACTGGCCCTGCAAGGTTATGGACAAGC
ACTTGTCAATTCTCGCGAAACAGCATGTAGAAACACGTTTTGTGAAAGTTCATGCTGAAA
AGGCTCCCTTTTTGACAGAGAAACTAAGGATTGTTGTTCTCCCAACTCTTGCATTGGTAA
AGAACACCAAAGTTGAGGATTATGTGGTTGGGTTTGATGAGCTTGGTGGTAAAGATGATT
TCAGCACTGAGGATCTGGAGGAACGTCTAGCGAAAGCTCAAGTGATCTTCCTTGATGGAG
AAGGGCCTGCACATGCATCCAAGCAGGCAACCAAACGAAGCGTTCGGCAATCAGATACTG
GCAACTCATCGGACTCTGAATAGTTTTGTTACTGCTTCTGAACTTATGCTAAATGTTTTT
ATTGGCTGTTACGGCAAACGGTTATGTTATCCCTATTAGTAATAGGAAAAGTTAATTAGT
CTAGCATTGAACATTTGAACTGGGACTTGGGAGTTAAAAGAGGTATCTAGAGTGACACAT
CAC