Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0248800-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:9071719:9075883:-1 gene:Os08g0248800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PYRB description:Similar to Aspartate carbamoyltransferase 3, chloroplast precursor (EC 2.1.3.2) (Aspartate transcarbamylase 3) (ATCase 3). (Os08t0248800-01)
Sequence	ATGGCGGCCGCCCGCGCCACCCTCCCGCTCCCGCGTGTCCCCGCCCCCTCGCCGAGGCCC CAGCTCAGGCCCTTCCCCTCCCTCCCCGCTCGCCGCGGCGCGGTGGCATGCGGCGCCGGC TCGGCGGCGGCGGGGGTCGCGGCGTCGCTGCGGCTCGGGGACGTGATCGAGGCGCAGCAG TTCGACCGGGACGCGCTGACGGAGATCTTCGAGGTGGCGCGGGAGATGGAGGCCCTGGAG CGCGGGTCCTCCTCCCGCGGCGCCGGGAGGAGCCGCGTCCTCGAGGGGTACCTCATGGCC ACGCTCTTCTATGAGCCGTCCACGCGCACGCGCCTCTCCTTCGAGGCCGCCATGCGGCGG CTCGGCGGGGAGGTGCTCACCACCGAGAACGCCCGCGAGTTCTCCTCCGCCGCCAAGGGC GAGACCCTGGAAGATACCATAAGGACTGTTGAGGGTTATTCTGATATTATTGTTCTGAGA CATTTTGAAAGTGGGGCTGCAAGGAGAGCAGCCGCCACTGCAGACATTCCAGTTATTAAT GCAGGCGATGGGCCAGGGCAACATCCAACTCAGGCTTTATTGGATGTCTATTCAATAGAG AGAGAAATTGGCACACTAGATGGAATAAAACTTGGTTTGGTTGGAGACCTTGCTAATGGA AGAACTGTTCGTTCTCTAGCCTATTTGATTGCCAAATACCAAAACATTAAGATATACTTT GTATCTCCAGATGTTGTAAAAATGAAGGATGACATCAAGGAATACTTAACTTCTCAAGGT GTTGAGTGGGAAGAAAGTTCAGATTTGTTGGAGGTGGCATCAAAATGCGATGTTATTTAT CAAACACGCATTCAAAAAGAAAGATTCGGTGAGAGGATAGATCTTTATGAAGCAGCTCGT GGTAAGTACATTGTGGACAAGAAGGTCTTAGATGTGCTGCCAAAACATGCTGTTATCATG CATCCCCTTCCAAGGCTTGATGAGATCACAATAGATGTTGACAGTGATCCGAGAGCTGCA TATTTTAGACAGGCCAAAAACGGCCTCTACATCAGAATGGCGTTGCTCAAACTTCTGCTT GTTGGTCGCTGA

Peptide Sequence

PEP ID	Os08t0248800-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:9071719:9075883:-1 gene:Os08g0248800 transcript:Os08t0248800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PYRB description:Similar to Aspartate carbamoyltransferase 3, chloroplast precursor (EC 2.1.3.2) (Aspartate transcarbamylase 3) (ATCase 3). (Os08t0248800-01)
Sequence	MAAARATLPLPRVPAPSPRPQLRPFPSLPARRGAVACGAGSAAAGVAASLRLGDVIEAQQ FDRDALTEIFEVAREMEALERGSSSRGAGRSRVLEGYLMATLFYEPSTRTRLSFEAAMRR LGGEVLTTENAREFSSAAKGETLEDTIRTVEGYSDIIVLRHFESGAARRAAATADIPVIN AGDGPGQHPTQALLDVYSIEREIGTLDGIKLGLVGDLANGRTVRSLAYLIAKYQNIKIYF VSPDVVKMKDDIKEYLTSQGVEWEESSDLLEVASKCDVIYQTRIQKERFGERIDLYEAAR GKYIVDKKVLDVLPKHAVIMHPLPRLDEITIDVDSDPRAAYFRQAKNGLYIRMALLKLLL VGR

Transcript Sequence

Transcript ID	Os08t0248800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:9071719:9075883:-1 gene:Os08g0248800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PYRB description:Similar to Aspartate carbamoyltransferase 3, chloroplast precursor (EC 2.1.3.2) (Aspartate transcarbamylase 3) (ATCase 3). (Os08t0248800-01)
Sequence	CTTAAACCCTAGCTCCCGCCGCTCCGCACAGTAAGCTCACTTCTCCTCCTCCTCCCCCAT CCATGGCGGCCGCCCGCGCCACCCTCCCGCTCCCGCGTGTCCCCGCCCCCTCGCCGAGGC CCCAGCTCAGGCCCTTCCCCTCCCTCCCCGCTCGCCGCGGCGCGGTGGCATGCGGCGCCG GCTCGGCGGCGGCGGGGGTCGCGGCGTCGCTGCGGCTCGGGGACGTGATCGAGGCGCAGC AGTTCGACCGGGACGCGCTGACGGAGATCTTCGAGGTGGCGCGGGAGATGGAGGCCCTGG AGCGCGGGTCCTCCTCCCGCGGCGCCGGGAGGAGCCGCGTCCTCGAGGGGTACCTCATGG CCACGCTCTTCTATGAGCCGTCCACGCGCACGCGCCTCTCCTTCGAGGCCGCCATGCGGC GGCTCGGCGGGGAGGTGCTCACCACCGAGAACGCCCGCGAGTTCTCCTCCGCCGCCAAGG GCGAGACCCTGGAAGATACCATAAGGACTGTTGAGGGTTATTCTGATATTATTGTTCTGA GACATTTTGAAAGTGGGGCTGCAAGGAGAGCAGCCGCCACTGCAGACATTCCAGTTATTA ATGCAGGCGATGGGCCAGGGCAACATCCAACTCAGGCTTTATTGGATGTCTATTCAATAG AGAGAGAAATTGGCACACTAGATGGAATAAAACTTGGTTTGGTTGGAGACCTTGCTAATG GAAGAACTGTTCGTTCTCTAGCCTATTTGATTGCCAAATACCAAAACATTAAGATATACT TTGTATCTCCAGATGTTGTAAAAATGAAGGATGACATCAAGGAATACTTAACTTCTCAAG GTGTTGAGTGGGAAGAAAGTTCAGATTTGTTGGAGGTGGCATCAAAATGCGATGTTATTT ATCAAACACGCATTCAAAAAGAAAGATTCGGTGAGAGGATAGATCTTTATGAAGCAGCTC GTGGTAAGTACATTGTGGACAAGAAGGTCTTAGATGTGCTGCCAAAACATGCTGTTATCA TGCATCCCCTTCCAAGGCTTGATGAGATCACAATAGATGTTGACAGTGATCCGAGAGCTG CATATTTTAGACAGGCCAAAAACGGCCTCTACATCAGAATGGCGTTGCTCAAACTTCTGC TTGTTGGTCGCTGACAGCTTTCTTAGTGCGTGGCGCTGTGGTGTTGATGGGGGTCAAAAA ATGTTTGTCTTAATCAATGGCTCCAAATCAACTGATTAGTATTGTACTAGGCACCATAAG TTAGATCCTTGCAAGGATTTAACCATGTCTAGAACTCTAGATGCATAATTTTCGATGTAA CAAAATATTCTGAAACAGAGATTTGTTGCTC