Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0244100-03
CDS Infomation	cds chromosome:IRGSP-1.0:8:8803165:8806506:-1 gene:Os08g0244100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Syntaxin 6, N-terminal domain containing protein. (Os08t0244100-01);Syntaxin 6, N-terminal domain containing protein. (Os08t0244100-03)
Sequence	ATGGCGGCGGCGGGAGGGCTGGAGCAGTGGCAGAAGGACGGGTTCTTCCAGGCCGCCGAG GAGGTGCAGGAGTCGGCGGACTTGATGGAATCTATTTATAGAACTTGGATGCGGGAACGC GATAGCGGAGCTAATTTAGAGGAGCTGAGCGATTTGCAAAGGGAGCTGAAGACAGCATTA GGAACTGCAAAGTGGCAGTTGGAGCAGTTTGAGAGAGCTATAAGCATGAGCAATGATAAG TATTCTTTGGAAGAGGGTACATTGGCCAGGCGTCGGCAGTTCGTTGTAGCAATGGAGGAC CAGATTTCTCAAGTAGAGAAACAAATAAATGATTACTCGATTGACAATGATAGGCGAGGG CTCAACTGGGTAAAGTTAGATGATGAGGAACGAGATGATCTTGTGGCTTTCCTTTCAGCA CCTGCACAGTTATCTCAAGATACAAAGAAAAGAGACAACACTTACCATAGTCCATCAAAA CAAAAGAATGCGTTGATTGGCGCGAATGATCCCAGGGACATGGCTGCAATCAGTAAAGAC CGACATAAAACTGAAGCATTATGCAGAGAAATTTCAAATGGTCAGAGTGAAGCTTGTTGT CTAGCCGAGCAGTTAAATGGTCACAGTACAAGCCCGAGTTCTGGTGGTGAACACTGGAAG ATCGATATTTCTGATGATAAAGACGATGATAGAAAATTGTCCCCTAACAAGGTCGAGGCA TCAAGTCAGGCAACTGCATTTTCTGGTATCATGAAAACCACCGAATCTTTCACAAGAGTA AGATGGTTGAGGAATAGCTTGTGGAAAGCCAAGAGTGATGAACATCTTCCGTTAAGATAT GATATGCCAAATCACTTAGACTGGAGGGTTATAACCTTATTAGCACAGAGGTTTAACGGG CTTACTGAAAGAAGCAGGAGTTGTTTCAGCGGTTGGAAGGAAAACTCTAGAGTATCTGGA AGGATGGGTGGACTTCATATACAAGGGCCGCAATACAACACTCAGTTTGGTCGTTCCATT CGAATAACCCTTTTACTGGTGTTGAGCATCTTTCTGATTGTGCCATTTCTCGTGTACTCA GCTTGA

Peptide Sequence

PEP ID	Os08t0244100-03
PEP Infomation	pep chromosome:IRGSP-1.0:8:8803165:8806506:-1 gene:Os08g0244100 transcript:Os08t0244100-03 gene_biotype:protein_coding transcript_biotype:protein_coding description:Syntaxin 6, N-terminal domain containing protein. (Os08t0244100-01);Syntaxin 6, N-terminal domain containing protein. (Os08t0244100-03)
Sequence	MAAAGGLEQWQKDGFFQAAEEVQESADLMESIYRTWMRERDSGANLEELSDLQRELKTAL GTAKWQLEQFERAISMSNDKYSLEEGTLARRRQFVVAMEDQISQVEKQINDYSIDNDRRG LNWVKLDDEERDDLVAFLSAPAQLSQDTKKRDNTYHSPSKQKNALIGANDPRDMAAISKD RHKTEALCREISNGQSEACCLAEQLNGHSTSPSSGGEHWKIDISDDKDDDRKLSPNKVEA SSQATAFSGIMKTTESFTRVRWLRNSLWKAKSDEHLPLRYDMPNHLDWRVITLLAQRFNG LTERSRSCFSGWKENSRVSGRMGGLHIQGPQYNTQFGRSIRITLLLVLSIFLIVPFLVYS A

Transcript Sequence

Transcript ID	Os08t0244100-03
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:8803165:8806506:-1 gene:Os08g0244100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Syntaxin 6, N-terminal domain containing protein. (Os08t0244100-01);Syntaxin 6, N-terminal domain containing protein. (Os08t0244100-03)
Sequence	CAGCGGCGGGGTTGGGGCGGCAGGCGGCTGTGAGGTTCTTGATTTGATCTGTGGTTGTTG TTGAGGTTGTGGTTGGGCGCCATGGCGGCGGCGGGAGGGCTGGAGCAGTGGCAGAAGGAC GGGTTCTTCCAGGCCGCCGAGGAGGTGCAGGAGTCGGCGGACTTGATGGAATCTATTTAT AGAACTTGGATGCGGGAACGCGATAGCGGAGCTAATTTAGAGGAGCTGAGCGATTTGCAA AGGGAGCTGAAGACAGCATTAGGAACTGCAAAGTGGCAGTTGGAGCAGTTTGAGAGAGCT ATAAGCATGAGCAATGATAAGTATTCTTTGGAAGAGGGTACATTGGCCAGGCGTCGGCAG TTCGTTGTAGCAATGGAGGACCAGATTTCTCAAGTAGAGAAACAAATAAATGATTACTCG ATTGACAATGATAGGCGAGGGCTCAACTGGGTAAAGTTAGATGATGAGGAACGAGATGAT CTTGTGGCTTTCCTTTCAGCACCTGCACAGTTATCTCAAGATACAAAGAAAAGAGACAAC ACTTACCATAGTCCATCAAAACAAAAGAATGCGTTGATTGGCGCGAATGATCCCAGGGAC ATGGCTGCAATCAGTAAAGACCGACATAAAACTGAAGCATTATGCAGAGAAATTTCAAAT GGTCAGAGTGAAGCTTGTTGTCTAGCCGAGCAGTTAAATGGTCACAGTACAAGCCCGAGT TCTGGTGGTGAACACTGGAAGATCGATATTTCTGATGATAAAGACGATGATAGAAAATTG TCCCCTAACAAGGTCGAGGCATCAAGTCAGGCAACTGCATTTTCTGGTATCATGAAAACC ACCGAATCTTTCACAAGAGTAAGATGGTTGAGGAATAGCTTGTGGAAAGCCAAGAGTGAT GAACATCTTCCGTTAAGATATGATATGCCAAATCACTTAGACTGGAGGGTTATAACCTTA TTAGCACAGAGGTTTAACGGGCTTACTGAAAGAAGCAGGAGTTGTTTCAGCGGTTGGAAG GAAAACTCTAGAGTATCTGGAAGGATGGGTGGACTTCATATACAAGGGCCGCAATACAAC ACTCAGTTTGGTCGTTCCATTCGAATAACCCTTTTACTGGTGTTGAGCATCTTTCTGATT GTGCCATTTCTCGTGTACTCAGCTTGACAATGCTCATATTGGTGGCTGCTGGTGAAGGAA AAAGTATCCGTTATTGTACTTGCAAACCGTGGTTGGTGTTATTCACATGCTCAGATGAAA CAAACGAGCGGGTAATTACAGATGGAGCTGTACATAGGAGGGGAAAAAGAAACAAAACGG GAACGACTTCATTTGTGGAGAGGAAAAAGAAACAAAACGGGAACGACTTCATTTGTGCAA TGCAAAATTTCCAAGATCAGAAAACGTGTTGTCACCAGCAGAAAATCATCCTGAGATGGA TCCATAGTTAATGGCTATTTGGAGTCTGTTGTGATGGATGATTCATTGATTCCTGCCAAT TTCTCCTTGCTGCTGTACCCTCACCAAGGCAATTGTAAAAAAAAAATGTAGAGCTGTTGG GAAATGGATTTGAACGACTATTGTGAATGATTTATACAATTTGTGGAAGTGAACAGTTTC GGTGAAATGAACTGTTTGGCTGATCTGAAGGCATTTCATCAGAAAAAAACATTCA