Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0243900-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:8795683:8797831:-1 gene:Os08g0243900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Mu2 adaptin subunit (AP50) of AP2 domain containing protein. (Os08t0243900-01)
Sequence	ATGGCGTGCCTCGCGATCTCCCTCCAGCCGGTGAACGGCCCGGACATCCTCCTCCAGACC CGATCCTGGTTCCCCGTCTCCCGCGCCCTCGCCGCCGTCTCCTCCTTCCGCCTCGCCCGC CTCCACCTCGCCCGCGGGAAGCAGCAGCAGTTGTCATCGTCGTCGTCGGCCGCCGCGGCG GCGGCGACGCTCGAGGCCATCGGCGACGACCCGCTCGCCGCCGGGTCGGGGCAGCTCGTG GTCGGGGTGGAGTCGCAGTACCGCGTCGTGTACCGCCTAGTCAACTCCATCTACGTGCTC GGCGTCACCACCTCCTCCGACCACGCCTCCCCCGCCGTCCACGCCTTCGCCGTCGCCGAC GCCGTCAACCAGGCCGTCTCCGTCGTCGTCGCCGCGTGCCGCGGCGTCGACGTCACGCCG GAGAAGGTGCACCGCAAGTACCCGGAGGTCTACCTCGCCCTCGACCTCGTCCTCCACGGC GTCGGCTCCGTCCGCCTCTCCCAGATCCTCGCCACCATCCATGGCGACAACCTCGCTCGC ATGGTGAATTCATCCCCTGACGCCGAGGCGAAAGCTCGTGGCGCTGATCCCTGGCCCGCC GTCGAGCACCTCGCCCACGATCGCCATGCCGCTCGCGATGGCTTCACGGGCGCCTCGTTC GAGCTCCCCCAGGAGACCCTTGCTGCCGGTGACGAGTTCTCCGCGTCTAACATTGCGCCG GCGGCTGCTGCGGCTACTGGGGATGAGCCTCCACCGGAGGAGGCAGCTCCCGTGGAGAAG GACCCGTTTGCAGCCAGTGAACTGGTTAACAATTCTGAGGAGGCGTTGGTTGGTGGGTTC AAGAAGAACAAGGAGACCGCCATTGTGGTTGCTGATCCCGCGGCTGCGCTTGCTGGGTTG GAGGTCACGACCTTGCCACCAGCTGAGGCGACTAAGCCAACATTTATTGGAGTTGAAGGG TTTGAGGGTGACTATGGTGGAATTGAGTTTGGCAATGAGGAGGCTTCACTGGCCGAGGCA TTTGAAGGGTTCAATGCGCCGTTTGGGGGTGGATTGGATGCTTCAGAGTTTGTTACCACA ACAAAGAAGGACCATAAGGATAAGAGCATCACTGGTCTTGAGCTGCTAGCCACTAGTGCT GGACAGGGACCAAATGCACCTGGTGGTACCCCGCTGGAGAACTTGTTGGTGACAAAGAGC ACAGAGATGACAGCCCCTGAGCTATACATCGTGGAGGAGGTCAATGCAGAATTTAAGGAG TCTATTCTTGCACGGGTTGGTTTGAAGGGTACAATCTTTCTGCGAACGTTGCCACCAAAG AAGGCGGCTGGTAAGGAGACAGAGTTCTCATTTCGTCTTGAGGGCACATCTGGAATGAAG AAGGCCGCGTTGCAGAGCACTGTGTTGAGCAACCTCGAGAATGGGATGTTCCATGTCCGG ACGCCATCGAAGGAGGAACCCATCCCCATCATGAAGTACAGCTTTCTGCCCAAGCACTCA CCTCTCCCTTTGAGGATGCGCCTTGTGAAGCGACATAGCGGAACATTGCTCTCAGTGATG ATTCAATACGCATCAAACCCAATGTTGCCACAGCCGCTGAGCAATGTTACGTTCATTGTT AAGCTTCCTGTGGACCCAACTCTGCTAAATGTTTCACCCAAGGCTGTGCTGAATCGGGCA GAGAGGGAGCTCAGGTGGCACATCCCAGACATTCCCCTGAAAGGACCTGCTGGACGTTTG AGGGCTCGGATGCCTGTAGATCAGGACTCAAAGGATGGTGAGCTAGAGGTTGTTGGGATG GTGAAGTTTGCTTACCAAGGGCCATTTACATTGTCTGGCATCAAACTATGCCCAGCCACT GATGGCACGGCTCAGTTTAATGAGGCTGGCCACACCTTCTCCAGTGGGAGTTATCTGTGC ATCTAA

Peptide Sequence

PEP ID	Os08t0243900-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:8795683:8797831:-1 gene:Os08g0243900 transcript:Os08t0243900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Mu2 adaptin subunit (AP50) of AP2 domain containing protein. (Os08t0243900-01)
Sequence	MACLAISLQPVNGPDILLQTRSWFPVSRALAAVSSFRLARLHLARGKQQQLSSSSSAAAA AATLEAIGDDPLAAGSGQLVVGVESQYRVVYRLVNSIYVLGVTTSSDHASPAVHAFAVAD AVNQAVSVVVAACRGVDVTPEKVHRKYPEVYLALDLVLHGVGSVRLSQILATIHGDNLAR MVNSSPDAEAKARGADPWPAVEHLAHDRHAARDGFTGASFELPQETLAAGDEFSASNIAP AAAAATGDEPPPEEAAPVEKDPFAASELVNNSEEALVGGFKKNKETAIVVADPAAALAGL EVTTLPPAEATKPTFIGVEGFEGDYGGIEFGNEEASLAEAFEGFNAPFGGGLDASEFVTT TKKDHKDKSITGLELLATSAGQGPNAPGGTPLENLLVTKSTEMTAPELYIVEEVNAEFKE SILARVGLKGTIFLRTLPPKKAAGKETEFSFRLEGTSGMKKAALQSTVLSNLENGMFHVR TPSKEEPIPIMKYSFLPKHSPLPLRMRLVKRHSGTLLSVMIQYASNPMLPQPLSNVTFIV KLPVDPTLLNVSPKAVLNRAERELRWHIPDIPLKGPAGRLRARMPVDQDSKDGELEVVGM VKFAYQGPFTLSGIKLCPATDGTAQFNEAGHTFSSGSYLCI

Transcript Sequence

Transcript ID	Os08t0243900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:8795683:8797831:-1 gene:Os08g0243900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Mu2 adaptin subunit (AP50) of AP2 domain containing protein. (Os08t0243900-01)
Sequence	ACCACCTCACCTCACTCCCGATCAGATCCGAGCCCTAACCCTAGCCTCTCGCCGGCGGCG GCGGCGGCGGCGATGGCGTGCCTCGCGATCTCCCTCCAGCCGGTGAACGGCCCGGACATC CTCCTCCAGACCCGATCCTGGTTCCCCGTCTCCCGCGCCCTCGCCGCCGTCTCCTCCTTC CGCCTCGCCCGCCTCCACCTCGCCCGCGGGAAGCAGCAGCAGTTGTCATCGTCGTCGTCG GCCGCCGCGGCGGCGGCGACGCTCGAGGCCATCGGCGACGACCCGCTCGCCGCCGGGTCG GGGCAGCTCGTGGTCGGGGTGGAGTCGCAGTACCGCGTCGTGTACCGCCTAGTCAACTCC ATCTACGTGCTCGGCGTCACCACCTCCTCCGACCACGCCTCCCCCGCCGTCCACGCCTTC GCCGTCGCCGACGCCGTCAACCAGGCCGTCTCCGTCGTCGTCGCCGCGTGCCGCGGCGTC GACGTCACGCCGGAGAAGGTGCACCGCAAGTACCCGGAGGTCTACCTCGCCCTCGACCTC GTCCTCCACGGCGTCGGCTCCGTCCGCCTCTCCCAGATCCTCGCCACCATCCATGGCGAC AACCTCGCTCGCATGGTGAATTCATCCCCTGACGCCGAGGCGAAAGCTCGTGGCGCTGAT CCCTGGCCCGCCGTCGAGCACCTCGCCCACGATCGCCATGCCGCTCGCGATGGCTTCACG GGCGCCTCGTTCGAGCTCCCCCAGGAGACCCTTGCTGCCGGTGACGAGTTCTCCGCGTCT AACATTGCGCCGGCGGCTGCTGCGGCTACTGGGGATGAGCCTCCACCGGAGGAGGCAGCT CCCGTGGAGAAGGACCCGTTTGCAGCCAGTGAACTGGTTAACAATTCTGAGGAGGCGTTG GTTGGTGGGTTCAAGAAGAACAAGGAGACCGCCATTGTGGTTGCTGATCCCGCGGCTGCG CTTGCTGGGTTGGAGGTCACGACCTTGCCACCAGCTGAGGCGACTAAGCCAACATTTATT GGAGTTGAAGGGTTTGAGGGTGACTATGGTGGAATTGAGTTTGGCAATGAGGAGGCTTCA CTGGCCGAGGCATTTGAAGGGTTCAATGCGCCGTTTGGGGGTGGATTGGATGCTTCAGAG TTTGTTACCACAACAAAGAAGGACCATAAGGATAAGAGCATCACTGGTCTTGAGCTGCTA GCCACTAGTGCTGGACAGGGACCAAATGCACCTGGTGGTACCCCGCTGGAGAACTTGTTG GTGACAAAGAGCACAGAGATGACAGCCCCTGAGCTATACATCGTGGAGGAGGTCAATGCA GAATTTAAGGAGTCTATTCTTGCACGGGTTGGTTTGAAGGGTACAATCTTTCTGCGAACG TTGCCACCAAAGAAGGCGGCTGGTAAGGAGACAGAGTTCTCATTTCGTCTTGAGGGCACA TCTGGAATGAAGAAGGCCGCGTTGCAGAGCACTGTGTTGAGCAACCTCGAGAATGGGATG TTCCATGTCCGGACGCCATCGAAGGAGGAACCCATCCCCATCATGAAGTACAGCTTTCTG CCCAAGCACTCACCTCTCCCTTTGAGGATGCGCCTTGTGAAGCGACATAGCGGAACATTG CTCTCAGTGATGATTCAATACGCATCAAACCCAATGTTGCCACAGCCGCTGAGCAATGTT ACGTTCATTGTTAAGCTTCCTGTGGACCCAACTCTGCTAAATGTTTCACCCAAGGCTGTG CTGAATCGGGCAGAGAGGGAGCTCAGGTGGCACATCCCAGACATTCCCCTGAAAGGACCT GCTGGACGTTTGAGGGCTCGGATGCCTGTAGATCAGGACTCAAAGGATGGTGAGCTAGAG GTTGTTGGGATGGTGAAGTTTGCTTACCAAGGGCCATTTACATTGTCTGGCATCAAACTA TGCCCAGCCACTGATGGCACGGCTCAGTTTAATGAGGCTGGCCACACCTTCTCCAGTGGG AGTTATCTGTGCATCTAATTGGTACCTTCTTTGTATTGTAGTTGTTACTTTACCCTTGAT TTGTTCGGTTTGCTTCTAAAGCAGGTTGTGAAATTCCTATTGTATGTAGTGACGCTTGTT TGTTTTTTGAGGCTGGAAATTACATCATGTTTTTGATTTGTCTATTATT