Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0243100-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:8703799:8708888:1 gene:Os08g0243100 gene_biotype:protein_coding transcript_biotype:protein_coding description:4'-phosphopantetheinyl transferase domain containing protein. (Os08t0243100-01)
Sequence	ATGCACCACCGCCTCCTCCTCCGCCGCGGCGCGATGCCCGTCCCCCCGCCGCTGCCCCCG CGGACGCCGCCGCCGGGGGTCGCGCGCCCCTTCGCCTCCCTCCCTCCCCCACCGCCTCTC CAGTCACGCAGGGAGGTGCATGTTTGGTATGTTTGCCCTGATGAGCTGAATGATCACTCC CACCTGGATATGTACATGGAACTCCTTTCTCCCTCCGAAAGGAAGAACGCGCTGTCTATG AACGGGCCGAGGCTGCAGAAAGATGCTATGTTGTCGCGTGCATTGCTGCGCACTACCCTC TCAAGATATACAAATTCTAAAATTGATCCAAGATCATTTGAGTTTAAGAAGAATAAATTT GGTAAGCCTGAGATATTGTGGCGGTCTGATGATAGCAATATGGAGTGGCCTTGGCATTTT AATATTTCACACACATCTTCTCTGATTGCCTGCGGCATTGCGATGGATGCTCCTATTGGC ATTGATGTTGAAGAAAAGAAGAGAAAGACAACCAAGAGTATTTTATCTCTTGCTCGCCGT TACTTTACCCCTTCAGAAGTTGATTCTCTAGCTAAAATTGCTGATTCTGATGCTCAGCAA AAGGAATTCATAAAACTATGGACCCTAAAAGAGGCATATGTTAAGGCTCTTGGAAGGGGG TTTTCAGGTGCTCCTTTTAATAGGTTTTCAATCCAATTGAAAACAAATAGCCGAATTCAG ATTACTAAGGCACCAAAAGTGTGTAATGATTCTGATTCTGGTGATTATCTTTCTGAGAAC TGGCGGTTTGCACTTACAGAGCTAAACAGTTCTTATTATATGGCGGTTTGTATAGAGGAC AACTCAAGAGGTTCTGAAAATGGTTCAGTACCACTAGGATTGAAAGTATGGAAGACCGTT CCATTCATAGAAGATACACTTGTTTCTGGAACAGATGCCGTAAAACTTATTACGTGA

Peptide Sequence

PEP ID	Os08t0243100-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:8703799:8708888:1 gene:Os08g0243100 transcript:Os08t0243100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:4'-phosphopantetheinyl transferase domain containing protein. (Os08t0243100-01)
Sequence	MHHRLLLRRGAMPVPPPLPPRTPPPGVARPFASLPPPPPLQSRREVHVWYVCPDELNDHS HLDMYMELLSPSERKNALSMNGPRLQKDAMLSRALLRTTLSRYTNSKIDPRSFEFKKNKF GKPEILWRSDDSNMEWPWHFNISHTSSLIACGIAMDAPIGIDVEEKKRKTTKSILSLARR YFTPSEVDSLAKIADSDAQQKEFIKLWTLKEAYVKALGRGFSGAPFNRFSIQLKTNSRIQ ITKAPKVCNDSDSGDYLSENWRFALTELNSSYYMAVCIEDNSRGSENGSVPLGLKVWKTV PFIEDTLVSGTDAVKLIT

Transcript Sequence

Transcript ID	Os08t0243100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:8703799:8708888:1 gene:Os08g0243100 gene_biotype:protein_coding transcript_biotype:protein_coding description:4'-phosphopantetheinyl transferase domain containing protein. (Os08t0243100-01)
Sequence	GAATGCACCACCGCCTCCTCCTCCGCCGCGGCGCGATGCCCGTCCCCCCGCCGCTGCCCC CGCGGACGCCGCCGCCGGGGGTCGCGCGCCCCTTCGCCTCCCTCCCTCCCCCACCGCCTC TCCAGTCACGCAGGGAGGTGCATGTTTGGTATGTTTGCCCTGATGAGCTGAATGATCACT CCCACCTGGATATGTACATGGAACTCCTTTCTCCCTCCGAAAGGAAGAACGCGCTGTCTA TGAACGGGCCGAGGCTGCAGAAAGATGCTATGTTGTCGCGTGCATTGCTGCGCACTACCC TCTCAAGATATACAAATTCTAAAATTGATCCAAGATCATTTGAGTTTAAGAAGAATAAAT TTGGTAAGCCTGAGATATTGTGGCGGTCTGATGATAGCAATATGGAGTGGCCTTGGCATT TTAATATTTCACACACATCTTCTCTGATTGCCTGCGGCATTGCGATGGATGCTCCTATTG GCATTGATGTTGAAGAAAAGAAGAGAAAGACAACCAAGAGTATTTTATCTCTTGCTCGCC GTTACTTTACCCCTTCAGAAGTTGATTCTCTAGCTAAAATTGCTGATTCTGATGCTCAGC AAAAGGAATTCATAAAACTATGGACCCTAAAAGAGGCATATGTTAAGGCTCTTGGAAGGG GGTTTTCAGGTGCTCCTTTTAATAGGTTTTCAATCCAATTGAAAACAAATAGCCGAATTC AGATTACTAAGGCACCAAAAGTGTGTAATGATTCTGATTCTGGTGATTATCTTTCTGAGA ACTGGCGGTTTGCACTTACAGAGCTAAACAGTTCTTATTATATGGCGGTTTGTATAGAGG ACAACTCAAGAGGTTCTGAAAATGGTTCAGTACCACTAGGATTGAAAGTATGGAAGACCG TTCCATTCATAGAAGATACACTTGTTTCTGGAACAGATGCCGTAAAACTTATTACGTGAC TACATATAAGAATCTACCATTTATCATGTGAATTCGTCATATGACAACATGGATATTGGA CCTAGAGAGGAAACTCTAGTATTCTTCGATCGTTATTAGTAATGCCTGACATTGCGTGCT CGGGAGGACCTAGGAAATGCAACACCGTTTTCTCCAGATTCATACTTCGGTTATTAGTTC CCACTTCCCAGCCTGCCGCATAAACATGTTTTCCGAAGGAACAACCATCATTTTTACTGA TTGGAAGGATGTCAACACTAGTACAAGCTGGCATGTTGAAAGCTAGAAATTTCACCATCT ACTCGCAAGATTGAAGCCCCACTTTGCAAACACGATTGCATTCCAGGTTAAAGAGTTGTT TGTATTTGTCACTATTAGAGCTTAGAGAATAGGAATAGGAGTGCTCTGTGTTTTGTGTTA TTACATTGGATTGGAATAAGATGTGCTCCTGCCAAGTTAATTATGTTGGCTTGGTTTGAG GTAGCAGTTAGAATTCATGTGCTGTTTGAACTGATGCACTGATAAGTTTAATTTTCTTGA GTGATCGATTATTTCC