Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0242900-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:8681628:8686438:-1 gene:Os08g0242900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Afadin/alpha-actinin-binding domain containing protein. (Os08t0242900-01)
Sequence	ATGTCCGCCTCCTCGCGCTTCGATCTCCGGGCCTCGTCGCACCCGCACCAGCACGCCATC GGAGGCGGAGGCGGAGGCGGAGGCATGAGTGACGGTGGCGGTGGCGCGGCGGCGGCGTTC GCGGACGCGGGGAACCTCGAGCACTGCGCCAGGTACCTCAACCAGACGCTCGTCACCTTC GGCTTCCCGGCCTCGCTCGATCTCTTCGCCACCGACCCCGTATCGATTGCGAGAACGTGC AACTGCATCTATGCTCTTCTTCAGCAGCGGCAGCGTGATATTGAGTTCCGGGAGTCTACC AATGATCTGCGTCAGCGTATGCAGTCTGATATTTCTAGATTAGAAGCCAAGATTGAAAGA ATGGATGCTCAATTAGCTGCAAAAGATCGCGAGCTGGCCACATTGACTAGAACGGAGGCC AAAAACACTGCAACTTTGAAGGCTCAGATTGACAAGCTGCAACAGGAACGCGATGAGTTC CAAAAAATGGTTATTGGCAATCAGCAAGTACGTACCCAGCAAATTCATGAAATGAAGAAA AAAGAGAAAGAATACATCAAATTGCAGGAGAAGTTAAACCAGGTATTAATGGAGAAAAAG AAGGAATCATCACGTTCAGGAATGGAAATAATGAACTTGTTGCAGAAAGAAGGACGGCAG CGTGGAACTTGGAGTGGAAAAAAGAATGACAATGATTATTACAAAATGATTGTTGATGCC TATGAGGTAAAGAAGCAAGAGTTGATGCAAGAAAATGCTGATTTGCGAGCACTATTGCGT TCGATGCAGATGGATATGCGCGAGTTCCTCAATGCTCCAAATGGAGTTCCACAGCCAGCT GTTGTGGGCAATGGACGACAGGAGGCAGGATCTCCTCAGTCTCCACTTGGTGGCAAGACG GATGTCTTTGATTTGCCCTTTCACATGGCTAGAGACCAGATTGAAGAGAGTTTGCGCACT AAAATGGCTTCCATAAAGGCCCGAATGACACAACTTCAAGATGCCCAAAAGGGTGCAGAA GTGACATCAGAAGCTACCGAGCGGGAACTTGAACTTGAAGCTCAACTAGTTGAAGCTAGA AGCATTATCCAGGAGCAGGCATCCCTCATGTCCAAGCACTTTACGAAGTCTGATAAACCA AGGAGGTTGAGTGGATTGGATGCTGAGCGTGAGGCGGTTGCAGCTCAGGAGGTGTAA

Peptide Sequence

PEP ID	Os08t0242900-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:8681628:8686438:-1 gene:Os08g0242900 transcript:Os08t0242900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Afadin/alpha-actinin-binding domain containing protein. (Os08t0242900-01)
Sequence	MSASSRFDLRASSHPHQHAIGGGGGGGGMSDGGGGAAAAFADAGNLEHCARYLNQTLVTF GFPASLDLFATDPVSIARTCNCIYALLQQRQRDIEFRESTNDLRQRMQSDISRLEAKIER MDAQLAAKDRELATLTRTEAKNTATLKAQIDKLQQERDEFQKMVIGNQQVRTQQIHEMKK KEKEYIKLQEKLNQVLMEKKKESSRSGMEIMNLLQKEGRQRGTWSGKKNDNDYYKMIVDA YEVKKQELMQENADLRALLRSMQMDMREFLNAPNGVPQPAVVGNGRQEAGSPQSPLGGKT DVFDLPFHMARDQIEESLRTKMASIKARMTQLQDAQKGAEVTSEATERELELEAQLVEAR SIIQEQASLMSKHFTKSDKPRRLSGLDAEREAVAAQEV

Transcript Sequence

Transcript ID	Os08t0242900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:8681628:8686438:-1 gene:Os08g0242900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Afadin/alpha-actinin-binding domain containing protein. (Os08t0242900-01)
Sequence	AAATCAAATCCAATCCTCCTCCTCCAGATCTCTCCACCCCACCTCCGCCTCCCATGTCCG CCTCCTCGCGCTTCGATCTCCGGGCCTCGTCGCACCCGCACCAGCACGCCATCGGAGGCG GAGGCGGAGGCGGAGGCATGAGTGACGGTGGCGGTGGCGCGGCGGCGGCGTTCGCGGACG CGGGGAACCTCGAGCACTGCGCCAGGTACCTCAACCAGACGCTCGTCACCTTCGGCTTCC CGGCCTCGCTCGATCTCTTCGCCACCGACCCCGTATCGATTGCGAGAACGTGCAACTGCA TCTATGCTCTTCTTCAGCAGCGGCAGCGTGATATTGAGTTCCGGGAGTCTACCAATGATC TGCGTCAGCGTATGCAGTCTGATATTTCTAGATTAGAAGCCAAGATTGAAAGAATGGATG CTCAATTAGCTGCAAAAGATCGCGAGCTGGCCACATTGACTAGAACGGAGGCCAAAAACA CTGCAACTTTGAAGGCTCAGATTGACAAGCTGCAACAGGAACGCGATGAGTTCCAAAAAA TGGTTATTGGCAATCAGCAAGTACGTACCCAGCAAATTCATGAAATGAAGAAAAAAGAGA AAGAATACATCAAATTGCAGGAGAAGTTAAACCAGGTATTAATGGAGAAAAAGAAGGAAT CATCACGTTCAGGAATGGAAATAATGAACTTGTTGCAGAAAGAAGGACGGCAGCGTGGAA CTTGGAGTGGAAAAAAGAATGACAATGATTATTACAAAATGATTGTTGATGCCTATGAGG TAAAGAAGCAAGAGTTGATGCAAGAAAATGCTGATTTGCGAGCACTATTGCGTTCGATGC AGATGGATATGCGCGAGTTCCTCAATGCTCCAAATGGAGTTCCACAGCCAGCTGTTGTGG GCAATGGACGACAGGAGGCAGGATCTCCTCAGTCTCCACTTGGTGGCAAGACGGATGTCT TTGATTTGCCCTTTCACATGGCTAGAGACCAGATTGAAGAGAGTTTGCGCACTAAAATGG CTTCCATAAAGGCCCGAATGACACAACTTCAAGATGCCCAAAAGGGTGCAGAAGTGACAT CAGAAGCTACCGAGCGGGAACTTGAACTTGAAGCTCAACTAGTTGAAGCTAGAAGCATTA TCCAGGAGCAGGCATCCCTCATGTCCAAGCACTTTACGAAGTCTGATAAACCAAGGAGGT TGAGTGGATTGGATGCTGAGCGTGAGGCGGTTGCAGCTCAGGAGGTGTAAATTATGTTTG TGTCGACCTTCACAGGCTTCAGCTATCCAAGGCACGTCACGATGCCAACCTTTCATCGAG GTCTCATGTGTTTAGTAACCACCAAGCTTCCTCCTTGGTAAACCTGTTGTTGCCATGGTA GCATGACTTCTAGGCGTTCTCTGTGTAGTATTATGTGCAGGAGCATCTCCTCCGCTGTTG CTAACTGCCTGCCTCTGACTGTTACATGTATCGCACTTCTACTGTTAGGGAGAACAGATC AATGTAGCTATTATGGCCTACGAAATAGGCATCAATACCTTACTTACAGAATTGTT